RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 SNHG28P0DPA3 235 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 TAF1BQ53T94 588 aaPredicted RBP17.5■□□□□ 0.39
TCOF1-206ENST00000445265 AGBL3Q8NEM8 1001 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 POP1Q99575 1024 aaKnown RBP17.5■□□□□ 0.39
TCOF1-206ENST00000445265 ZC3H7BQ9UGR2 993 aaKnown RBP17.5■□□□□ 0.39
TCOF1-206ENST00000445265 SETD1AO15047 1707 aaKnown RBP17.5■□□□□ 0.39
TCOF1-206ENST00000445265 PDHA1P08559 390 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 RARAP10276 462 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 DRG2P55039 364 aaKnown RBP17.5■□□□□ 0.39
TCOF1-206ENST00000445265 GCNT1Q02742 428 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 THOC5Q13769 683 aaKnown RBP17.5■□□□□ 0.39
TCOF1-206ENST00000445265 ECM1Q16610 540 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 ETNPPLQ8TBG4 499 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 HES6Q96HZ4 224 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 ZNF668Q96K58 619 aaPredicted RBP17.5■□□□□ 0.39
TCOF1-206ENST00000445265 VPS11Q9H270 941 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 PAK5Q9P286 719 aa17.5■□□□□ 0.39
TCOF1-206ENST00000445265 CCDC195A0A1B0GUA6 201 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 KCNN4O15554 427 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 ART3Q13508 389 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 ST13P4Q8IZP2 240 aaPredicted RBP17.49■□□□□ 0.39
TCOF1-206ENST00000445265 SPATA18Q8TC71 538 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 CENPTQ96BT3 561 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 MRIQ9BWK5 157 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 FRMD8Q9BZ67 464 aaPredicted RBP17.49■□□□□ 0.39
TCOF1-206ENST00000445265 STAP1Q9ULZ2 295 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 CHMP2BQ9UQN3 213 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 ATF5Q9Y2D1 282 aaPredicted RBP17.49■□□□□ 0.39
TCOF1-206ENST00000445265 MTO1Q9Y2Z2 717 aaKnown RBP17.49■□□□□ 0.39
TCOF1-206ENST00000445265 TLR2O60603 784 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 OATP04181 439 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 PGM1P36871 562 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 STX1BP61266 288 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 PTK7Q13308 1070 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 CCDC117Q8IWD4 279 aaPredicted RBP17.49■□□□□ 0.39
TCOF1-206ENST00000445265 C1orf131Q8NDD1 294 aaKnown RBP17.49■□□□□ 0.39
TCOF1-206ENST00000445265 PIK3CDO00329 1044 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 POLRMTO00411 1230 aaKnown RBP17.49■□□□□ 0.39
TCOF1-206ENST00000445265 NFIBO00712 420 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 PPFIA2O75334 1257 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 SLC9A9Q8IVB4 645 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 MCOLN2Q8IZK6 566 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 SYTL5Q8TDW5 730 aaPredicted RBP17.49■□□□□ 0.39
TCOF1-206ENST00000445265 LRGUKQ96M69 825 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 EFHD1Q9BUP0 239 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 SPC25Q9HBM1 224 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 THEGQ9P2T0 379 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 PSMD10O75832 226 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 APRTP07741 180 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 ANKRD20A4Q4UJ75 823 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 ANKRD20A2Q5SQ80 823 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 ANKRD20A1Q5TYW2 823 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 IER5Q5VY09 327 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 DPY19L2Q6NUT2 758 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 LNX1Q8TBB1 728 aaPredicted RBP17.49■□□□□ 0.39
TCOF1-206ENST00000445265 RBM46Q8TBY0 533 aaKnown RBP17.49■□□□□ 0.39
TCOF1-206ENST00000445265 CCDC68Q9H2F9 335 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 NDE1Q9NXR1 346 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 BFARQ9NZS9 450 aa17.49■□□□□ 0.39
TCOF1-206ENST00000445265 TAL1P17542 331 aaPredicted RBP17.48■□□□□ 0.39
TCOF1-206ENST00000445265 FKBP1AP62942 108 aaKnown RBP17.48■□□□□ 0.39
TCOF1-206ENST00000445265 MORF4L2Q15014 288 aa17.48■□□□□ 0.39
TCOF1-206ENST00000445265 GRAMD1BQ3KR37 738 aa17.48■□□□□ 0.39
TCOF1-206ENST00000445265 SPDL1Q96EA4 605 aa17.48■□□□□ 0.39
TCOF1-206ENST00000445265 PFDN4Q9NQP4 134 aa17.48■□□□□ 0.39
TCOF1-206ENST00000445265 AVENQ9NQS1 362 aaPredicted RBP17.48■□□□□ 0.39
TCOF1-206ENST00000445265 IL18RAPO95256 599 aa17.48■□□□□ 0.39
TCOF1-206ENST00000445265 POLE2P56282 527 aa17.48■□□□□ 0.39
TCOF1-206ENST00000445265 ZFPM1Q8IX07 1006 aa17.48■□□□□ 0.39
TCOF1-206ENST00000445265 PDCD2LQ9BRP1 358 aa17.48■□□□□ 0.39
TCOF1-206ENST00000445265 OSBPL1AQ9BXW6 950 aa17.48■□□□□ 0.39
TCOF1-206ENST00000445265 ZNF518BQ9C0D4 1074 aa17.48■□□□□ 0.39
TCOF1-206ENST00000445265 NACA2Q9H009 215 aa17.48■□□□□ 0.39
TCOF1-206ENST00000445265 FAM49AQ9H0Q0 323 aaPredicted RBP17.48■□□□□ 0.39
TCOF1-206ENST00000445265 PHTF1Q9UMS5 762 aa17.48■□□□□ 0.39
TCOF1-206ENST00000445265 MAGED2Q9UNF1 606 aaPredicted RBP17.48■□□□□ 0.39
TCOF1-206ENST00000445265 KCPQ6ZWJ8 1503 aa17.48■□□□□ 0.39
TCOF1-206ENST00000445265 WEE2P0C1S8 567 aa17.48■□□□□ 0.39
TCOF1-206ENST00000445265 SPATA31C1P0DKV0 1188 aa17.48■□□□□ 0.39
TCOF1-206ENST00000445265 BRD2P25440 801 aaKnown RBP17.48■□□□□ 0.39
TCOF1-206ENST00000445265 NAMPTP43490 491 aa17.48■□□□□ 0.39
TCOF1-206ENST00000445265 C2CD6Q53TS8 623 aa17.48■□□□□ 0.39
TCOF1-206ENST00000445265 TFDP3Q5H9I0 405 aa17.48■□□□□ 0.39
TCOF1-206ENST00000445265 PARD3BQ8TEW8 1205 aa17.48■□□□□ 0.39
TCOF1-206ENST00000445265 SPIRE2Q8WWL2 714 aa17.48■□□□□ 0.39
TCOF1-206ENST00000445265 ATXN2LQ8WWM7 1075 aaKnown RBP17.48■□□□□ 0.39
TCOF1-206ENST00000445265 ZBTB39O15060 712 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 SERPINB9P50453 376 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 ARSHQ5FYA8 562 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 NOP9Q86U38 636 aaKnown RBP17.47■□□□□ 0.39
TCOF1-206ENST00000445265 DCLK3Q9C098 648 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 SNRPAP09012 282 aaKnown RBP17.47■□□□□ 0.39
TCOF1-206ENST00000445265 STIP1P31948 543 aaKnown RBP17.47■□□□□ 0.39
TCOF1-206ENST00000445265 IFI35P80217 286 aaPredicted RBP17.47■□□□□ 0.39
TCOF1-206ENST00000445265 GABPAQ06546 454 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 TMEM51Q9NW97 253 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 HUS1O60921 280 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 ZNF189O75820 626 aaPredicted RBP17.47■□□□□ 0.39
TCOF1-206ENST00000445265 UBOX5O94941 541 aa17.47■□□□□ 0.39
TCOF1-206ENST00000445265 TYK2P29597 1187 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms