RNA–Protein interactions for RNA: ENST00000444376.7

HNRNPU-205, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-205ENST00000444376 BRINP3Q76B58 766 aa17.13■□□□□ 0.33
HNRNPU-205ENST00000444376 PRUNE1Q86TP1 453 aa17.13■□□□□ 0.33
HNRNPU-205ENST00000444376 ZNF556Q9HAH1 456 aa17.13■□□□□ 0.33
HNRNPU-205ENST00000444376 PCDHB8Q9UN66 801 aa17.13■□□□□ 0.33
HNRNPU-205ENST00000444376 SNRPAP09012 282 aaKnown RBP17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 EDRF1Q3B7T1 1238 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 TRAPPC11Q7Z392 1133 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 PLA2G12BQ9BX93 195 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 BATF3Q9NR55 127 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 STK25O00506 426 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 EMC2Q15006 297 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 PCSK7Q16549 785 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 TJAP1Q5JTD0 557 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 KIF2BQ8N4N8 673 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 SH2D3AQ9BRG2 576 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 OSBPL8Q9BZF1 889 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 ADCY3O60266 1144 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 MMGT1Q8N4V1 131 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 DNAJC9Q8WXX5 260 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 FAM32AQ9Y421 112 aaKnown RBP17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 S100A5P33763 92 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 TMEM8AQ9HCN3 771 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 CCT8L1PA6NM43 557 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 IL18RAPO95256 599 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 POLBP06746 335 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 TCN1P20061 433 aaPredicted RBP17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 HMGCS2P54868 508 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 C6orf10Q5SRN2 563 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 PPP1R2P1Q96PQ5 205 aa17.12■□□□□ 0.33
HNRNPU-205ENST00000444376 REREQ9P2R6 1566 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 B2RBV5 119 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 CYBBP04839 570 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 RABL6Q3YEC7 729 aaPredicted RBP17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 SNX31Q8N9S9 440 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 PDGFRBP09619 1106 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 GPD1P21695 349 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 TBC1D19Q8N5T2 526 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 NSL1Q96IY1 281 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 CDC42EP1Q00587 391 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 CHI3L2Q15782 390 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 ZNF467Q7Z7K2 595 aaPredicted RBP17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 DDX53Q86TM3 631 aaKnown RBP17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 SLC25A41Q8N5S1 370 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 ERP44Q9BS26 406 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 SELENONQ9NZV5 590 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 ADGRA2Q96PE1 1338 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 GRAP2O75791 330 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 SERPIND1P05546 499 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 HMBSP08397 361 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 COILP38432 576 aaPredicted RBP17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 UBE3AQ05086 875 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 CCDC92Q53HC0 331 aaPredicted RBP17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 SPATA18Q8TC71 538 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 CLCA2Q9UQC9 943 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 RSAD1Q9HA92 442 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 METTL5Q9NRN9 209 aaKnown RBP17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 PKP3Q9Y446 797 aa17.11■□□□□ 0.33
HNRNPU-205ENST00000444376 SMAPO00193 183 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 HLA-DRAP01903 254 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 GRIN1Q05586 938 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 BARGINQ6ZT62 677 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 SHCBP1Q8NEM2 672 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 FOPNLQ96NB1 174 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 BLOC1S6Q9UL45 172 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 GRID1Q9ULK0 1009 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 PPP3CCP48454 512 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 GEMIN4P57678 1058 aaKnown RBP17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 SNRPFP62306 86 aaKnown RBP17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 GOLGA7BQ2TAP0 167 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 TRIM60Q495X7 471 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 PPIL6Q8IXY8 311 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 GID8Q9NWU2 228 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 DGKIO75912 1065 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 ASMTLO95671 621 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 PTGISQ16647 500 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 KYNUQ16719 465 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 ZNF677Q86XU0 584 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 KLF6Q99612 283 aaPredicted RBP17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 SLC7A5P2Q9GIP4 190 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 IGF2BP3O00425 579 aaKnown RBP eCLIP17.1■□□□□ 0.332e-8■□□□□ 8.3
HNRNPU-205ENST00000444376 EXTL3O43909 919 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 KLHDC7AQ5VTJ3 777 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 HORMAD1Q86X24 394 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 DDX42Q86XP3 938 aaKnown RBP eCLIP17.1■□□□□ 0.338e-7■■□□□ 11.8
HNRNPU-205ENST00000444376 SYN2Q92777 582 aaPredicted RBP17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 E2F7Q96AV8 911 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 SMARCAD1Q9H4L7 1026 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 PSD3Q9NYI0 1048 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 HNRNPRO43390 633 aaKnown RBP17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 SOX11P35716 441 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 LRRC74AQ0VAA2 488 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 PDK1Q15118 436 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 SMTNL2Q2TAL5 461 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 TKFCQ3LXA3 575 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 IL31Q6EBC2 164 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 SLC40A1Q9NP59 571 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 BCORL1Q5H9F3 1711 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 PLOD1Q02809 727 aaPredicted RBP17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 TRIP10Q15642 601 aa17.1■□□□□ 0.33
HNRNPU-205ENST00000444376 PLA2G4FQ68DD2 849 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms