RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 DDX11L8A8MPP1 907 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 CALM1P0DP23 149 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 CALM2P0DP24 149 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 CALM3P0DP25 149 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 HNRNPLP14866 589 aaKnown RBP eCLIP15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 ARSAP15289 507 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 ARF4P18085 180 aaPredicted RBP15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 BRCC3P46736 316 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 ADCY7P51828 1080 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 NAPAP54920 295 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 SEC13P55735 322 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 RPL6Q02878 288 aaKnown RBP15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 CCDC173Q0VFZ6 552 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 TRDNQ13061 729 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 CRY1Q16526 586 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 PLEKHG6Q3KR16 790 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 PKDCCQ504Y2 493 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 PRR16Q569H4 304 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 CCDC157Q569K6 752 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 WWC2Q6AWC2 1192 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 SPACA3Q8IXA5 215 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 ZNF654Q8IZM8 581 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 CCDC33Q8N5R6 958 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 CD101Q93033 1021 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 EXOC4Q96A65 974 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 MAP3K14Q99558 947 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 CXCL16Q9H2A7 254 aa15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 BMP2KQ9NSY1 1161 aaPredicted RBP15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 BCCIPQ9P287 314 aaKnown RBP eCLIP15.72■□□□□ 0.11
SYNCRIP-203ENST00000444272 ANTXRLA6NF34 631 aa15.71■□□□□ 0.11
SYNCRIP-203ENST00000444272 TMEM189-UBE2V1I3L0A0 370 aa15.71■□□□□ 0.11
SYNCRIP-203ENST00000444272 SFNP31947 248 aa15.71■□□□□ 0.11
SYNCRIP-203ENST00000444272 GJA4P35212 333 aa15.71■□□□□ 0.11
SYNCRIP-203ENST00000444272 GNAQP50148 359 aa15.71■□□□□ 0.11
SYNCRIP-203ENST00000444272 JAK3P52333 1124 aa15.71■□□□□ 0.11
SYNCRIP-203ENST00000444272 ZNF33AQ06730 810 aa15.71■□□□□ 0.11
SYNCRIP-203ENST00000444272 SART3Q15020 963 aaKnown RBP15.71■□□□□ 0.11
SYNCRIP-203ENST00000444272 TMEM92Q6UXU6 159 aa15.71■□□□□ 0.11
SYNCRIP-203ENST00000444272 USP33Q8TEY7 942 aa15.71■□□□□ 0.11
SYNCRIP-203ENST00000444272 TBC1D32Q96NH3 1257 aa15.71■□□□□ 0.11
SYNCRIP-203ENST00000444272 UNC45AQ9H3U1 944 aa15.71■□□□□ 0.11
SYNCRIP-203ENST00000444272 MMP17Q9ULZ9 603 aa15.71■□□□□ 0.11
SYNCRIP-203ENST00000444272 TBX20Q9UMR3 447 aa15.71■□□□□ 0.11
SYNCRIP-203ENST00000444272 YIPF1Q9Y548 306 aa15.71■□□□□ 0.11
SYNCRIP-203ENST00000444272 HEMK1Q9Y5R4 338 aaPredicted RBP15.71■□□□□ 0.11
SYNCRIP-203ENST00000444272 AHCTF1Q8WYP5 2266 aa15.71■□□□□ 0.11
SYNCRIP-203ENST00000444272 INO80B-WBP1J3KQ70 363 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 TRAPPC3O43617 180 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 DDAH1O94760 285 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 CYP3A4P08684 503 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 CLK2P49760 499 aaKnown RBP15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 CLCNKBP51801 687 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 KCNH2Q12809 1159 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 GRIK2Q13002 908 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 PCBP1Q15365 356 aaKnown RBP eCLIP15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 C6orf118Q5T5N4 469 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 ARHGAP40Q5TG30 622 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 JAKMIP3Q5VZ66 844 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 SLC27A1Q6PCB7 646 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 DHRS13Q6UX07 377 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 CD300LGQ6UXG3 332 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 ANO5Q75V66 913 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 GAREM2Q75VX8 874 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 C3orf58Q8NDZ4 430 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 CRYGNQ8WXF5 182 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 SLC7A3Q8WY07 619 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 TTC9Q92623 222 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 DSCC1Q9BVC3 393 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 AFF4Q9UHB7 1163 aaKnown RBP15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 FBXL5Q9UKA1 691 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 BSNQ9UPA5 3926 aa15.7■□□□□ 0.1
SYNCRIP-203ENST00000444272 USP9YO00507 2555 aaPredicted RBP15.69■□□□□ 0.1
SYNCRIP-203ENST00000444272 A0A1W2PQD8 194 aa15.69■□□□□ 0.1
SYNCRIP-203ENST00000444272 TERTO14746 1132 aaKnown RBP15.69■□□□□ 0.1
SYNCRIP-203ENST00000444272 RXRAP19793 462 aa15.69■□□□□ 0.1
SYNCRIP-203ENST00000444272 BYSLQ13895 437 aaKnown RBP15.69■□□□□ 0.1
SYNCRIP-203ENST00000444272 UBAP2LQ14157 1087 aaKnown RBP15.69■□□□□ 0.1
SYNCRIP-203ENST00000444272 AMHR2Q16671 573 aa15.69■□□□□ 0.1
SYNCRIP-203ENST00000444272 ARHGAP15Q53QZ3 475 aa15.69■□□□□ 0.1
SYNCRIP-203ENST00000444272 TICAM2Q86XR7 235 aa15.69■□□□□ 0.1
SYNCRIP-203ENST00000444272 RHBDD1Q8TEB9 315 aa15.69■□□□□ 0.1
SYNCRIP-203ENST00000444272 CDC6Q99741 560 aa15.69■□□□□ 0.1
SYNCRIP-203ENST00000444272 FAM117AQ9C073 453 aa15.69■□□□□ 0.1
SYNCRIP-203ENST00000444272 DNAJC25Q9H1X3 360 aa15.69■□□□□ 0.1
SYNCRIP-203ENST00000444272 CPNE5Q9HCH3 593 aa15.69■□□□□ 0.1
SYNCRIP-203ENST00000444272 B4GALT5O43286 388 aa15.68■□□□□ 0.1
SYNCRIP-203ENST00000444272 GABRR2P28476 465 aa15.68■□□□□ 0.1
SYNCRIP-203ENST00000444272 NPEPPSP55786 919 aa15.68■□□□□ 0.1
SYNCRIP-203ENST00000444272 CYP4F8P98187 520 aa15.68■□□□□ 0.1
SYNCRIP-203ENST00000444272 MYO1EQ12965 1108 aa15.68■□□□□ 0.1
SYNCRIP-203ENST00000444272 SERINC3Q13530 473 aa15.68■□□□□ 0.1
SYNCRIP-203ENST00000444272 PIAS4Q8N2W9 510 aaPredicted RBP15.68■□□□□ 0.1
SYNCRIP-203ENST00000444272 CCDC26Q8TAB7 109 aa15.68■□□□□ 0.1
SYNCRIP-203ENST00000444272 FGF11Q92914 225 aa15.68■□□□□ 0.1
SYNCRIP-203ENST00000444272 KNTC1P50748 2209 aa15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 SMCO2A6NFE2 343 aa15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 TBX3O15119 743 aa15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 GAS7O60861 476 aa15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 MYF5P13349 255 aa15.67■□□□□ 0.1
SYNCRIP-203ENST00000444272 WEE1P30291 646 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms