RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 NTHL1P78549 312 aa20.33■□□□□ 0.85
ATPAF2-201ENST00000444058 HTR4Q13639 388 aa20.33■□□□□ 0.85
ATPAF2-201ENST00000444058 RNF19BQ6ZMZ0 732 aa20.33■□□□□ 0.85
ATPAF2-201ENST00000444058 HS2ST1Q7LGA3 356 aa20.33■□□□□ 0.85
ATPAF2-201ENST00000444058 SLC44A3Q8N4M1 653 aa20.33■□□□□ 0.85
ATPAF2-201ENST00000444058 LRRC52Q8N7C0 313 aa20.33■□□□□ 0.85
ATPAF2-201ENST00000444058 SMOC2Q9H3U7 446 aa20.33■□□□□ 0.85
ATPAF2-201ENST00000444058 AGPAT3Q9NRZ7 376 aa20.33■□□□□ 0.85
ATPAF2-201ENST00000444058 HCFC1R1Q9NWW0 138 aa20.33■□□□□ 0.85
ATPAF2-201ENST00000444058 HSPBP1Q9NZL4 362 aa20.33■□□□□ 0.85
ATPAF2-201ENST00000444058 ITGA11Q9UKX5 1188 aa20.33■□□□□ 0.85
ATPAF2-201ENST00000444058 ZDBF2Q9HCK1 2354 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 A0A1B0GVL5 298 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 A0A1W2PQ27 194 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 A0A1W2PQ64 194 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 A0A1W2PQD8 194 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 CYB561D2O14569 222 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 RHOP08100 348 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 CASP1P29466 404 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 PSMD2Q13200 908 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 PLD1Q13393 1074 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 MTSS1LQ765P7 747 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 METTL23Q86XA0 190 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 C12orf56Q8IXR9 622 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 ELMOD1Q8N336 334 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 C1orf127Q8N9H9 656 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 LEMD2Q8NC56 503 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 CXorf38Q8TB03 319 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 ITFG1Q8TB96 612 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 PRRX2Q99811 253 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 PDE11AQ9HCR9 933 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 GDE1Q9NZC3 331 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 WNT16Q9UBV4 365 aa20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 MRPS23Q9Y3D9 190 aaKnown RBP20.32■□□□□ 0.84
ATPAF2-201ENST00000444058 ZNF197O14709 1029 aa20.31■□□□□ 0.84
ATPAF2-201ENST00000444058 SRFP11831 508 aa20.31■□□□□ 0.84
ATPAF2-201ENST00000444058 SYKP43405 635 aa20.31■□□□□ 0.84
ATPAF2-201ENST00000444058 NUBP1P53384 320 aa20.31■□□□□ 0.84
ATPAF2-201ENST00000444058 SMARCB1Q12824 385 aa20.31■□□□□ 0.84
ATPAF2-201ENST00000444058 IQCEQ6IPM2 695 aa20.31■□□□□ 0.84
ATPAF2-201ENST00000444058 CENPPQ6IPU0 288 aa20.31■□□□□ 0.84
ATPAF2-201ENST00000444058 CBWD2Q8IUF1 395 aa20.31■□□□□ 0.84
ATPAF2-201ENST00000444058 NPAS3Q8IXF0 933 aa20.31■□□□□ 0.84
ATPAF2-201ENST00000444058 THEM5Q8N1Q8 247 aa20.31■□□□□ 0.84
ATPAF2-201ENST00000444058 GOLGA5Q8TBA6 731 aa20.31■□□□□ 0.84
ATPAF2-201ENST00000444058 RSAD2Q8WXG1 361 aa20.31■□□□□ 0.84
ATPAF2-201ENST00000444058 ZNF512Q96ME7 567 aaPredicted RBP20.31■□□□□ 0.84
ATPAF2-201ENST00000444058 INTS13Q9NVM9 706 aa20.31■□□□□ 0.84
ATPAF2-201ENST00000444058 MUC6Q6W4X9 2439 aa20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 KLRC4O43908 158 aa20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 VNN2O95498 520 aa20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 ITGB3P05106 788 aa20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 OR4Q2P0C623 313 aa20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 POLR2BP30876 1174 aaKnown RBP20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 PLA2G5P39877 138 aa20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 EPHA5P54756 1037 aa20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 RBP5P82980 135 aa20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 SNRNP35Q16560 246 aaKnown RBP20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 KNOP1Q1ED39 458 aaKnown RBP20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 GRAMD1CQ8IYS0 662 aa20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 CSGALNACT2Q8N6G5 542 aa20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 OR10T2Q8NGX3 314 aa20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 SPATA18Q8TC71 538 aa20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 C2orf15Q8WU43 125 aaKnown RBP20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 TMEM174Q8WUU8 243 aa20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 CHAMP1Q96JM3 812 aa20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 ZCWPW1Q9H0M4 648 aa20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 SLC39A2Q9NP94 309 aa20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 GDAP2Q9NXN4 497 aa20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 AGAP1Q9UPQ3 857 aa20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 NUMBLQ9Y6R0 609 aa20.3■□□□□ 0.84
ATPAF2-201ENST00000444058 SCN1AP35498 2009 aa20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 MTMR11A4FU01 709 aa20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 PRPF40AO75400 957 aaKnown RBP20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 TMEM191BP0C7N4 346 aa20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 AVPR2P30518 371 aa20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 NUCB2P80303 420 aa20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 TWF1Q12792 350 aa20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 DUSP4Q13115 394 aa20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 DUOXA2Q1HG44 320 aa20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 SLC5A9Q2M3M2 681 aa20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 PRSS36Q5K4E3 855 aa20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 CYP4A22Q5TCH4 519 aa20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 WSCD1Q658N2 575 aa20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 WDR49Q8IV35 697 aa20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 XXYLT1Q8NBI6 393 aa20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 NOC3LQ8WTT2 800 aaKnown RBP20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 ANKRD36BP1Q96IX9 119 aa20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 CORO1BQ9BR76 489 aa20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 SLC2A4RGQ9NR83 387 aa20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 CEP72Q9P209 647 aa20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 YIPF1Q9Y548 306 aa20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 DOCK6Q96HP0 2047 aa20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 NOTCH4Q99466 2003 aa20.29■□□□□ 0.84
ATPAF2-201ENST00000444058 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.28■□□□□ 0.84
ATPAF2-201ENST00000444058 PDGFBP01127 241 aaPredicted RBP20.28■□□□□ 0.84
ATPAF2-201ENST00000444058 TUFMP49411 452 aaKnown RBP20.28■□□□□ 0.84
ATPAF2-201ENST00000444058 CLCN5P51795 746 aa20.28■□□□□ 0.84
ATPAF2-201ENST00000444058 NDUFA8P51970 172 aa20.28■□□□□ 0.84
ATPAF2-201ENST00000444058 STK4Q13043 487 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms