RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 SNRNP48Q6IEG0 339 aaKnown RBP13.9□□□□□ -0.18
SLC48A1-201ENST00000442218 TAS1R3Q7RTX0 852 aa13.9□□□□□ -0.18
SLC48A1-201ENST00000442218 CNKSR2Q8WXI2 1034 aa13.9□□□□□ -0.18
SLC48A1-201ENST00000442218 TARS2Q9BW92 718 aaKnown RBP13.9□□□□□ -0.18
SLC48A1-201ENST00000442218 TRAIPQ9BWF2 469 aa13.9□□□□□ -0.18
SLC48A1-201ENST00000442218 DEFB129Q9H1M3 183 aa13.9□□□□□ -0.18
SLC48A1-201ENST00000442218 NEU2Q9Y3R4 380 aa13.9□□□□□ -0.18
SLC48A1-201ENST00000442218 SGK1O00141 431 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 WEE2P0C1S8 567 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 BRD2P25440 801 aaKnown RBP13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 MSH2P43246 934 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 EAPPQ56P03 285 aaPredicted RBP13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 PAXIP1Q6ZW49 1069 aaPredicted RBP13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 CCDC60Q8IWA6 550 aaPredicted RBP13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 CCDC33Q8N5R6 958 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 TRPM4Q8TD43 1214 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 SERPINB12Q96P63 405 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 HAPLN2Q9GZV7 340 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 POLR3FQ9H1D9 316 aaPredicted RBP13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 RNF146Q9NTX7 359 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 KCND2Q9NZV8 630 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 WHRNQ9P202 907 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 ARL2BPQ9Y2Y0 163 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 ZNFX1Q9P2E3 1918 aaKnown RBP13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 RFX1P22670 979 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 HADHBP55084 474 aaKnown RBP13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 SP2Q02086 613 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 MAMLD1Q13495 774 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 WDR44Q5JSH3 913 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 NLRX1Q86UT6 975 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 GPD1LQ8N335 351 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 MICAL1Q8TDZ2 1067 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 ZNF570Q96NI8 536 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 PPP1R16BQ96T49 567 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 PLVAPQ9BX97 442 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 NPHS2Q9NP85 383 aa13.89□□□□□ -0.19
SLC48A1-201ENST00000442218 EDN1P05305 212 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 SLC8A1P32418 973 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 GPC3P51654 580 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 PDIA2Q13087 525 aaKnown RBP13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 TCHPQ9BT92 498 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 TRABDQ9H4I3 376 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 SLC38A10Q9HBR0 1119 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 KIAA1586Q9HCI6 787 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 XPNPEP1Q9NQW7 623 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 PCSK1NQ9UHG2 260 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 NUB1Q9Y5A7 615 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 WDR64B1ANS9 1081 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 GGPS1O95749 300 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 EPHB2P29323 1055 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 TNFSF9P41273 254 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 GCLCP48506 637 aaPredicted RBP13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 NCKAP1LP55160 1127 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 CNTN2Q02246 1040 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 PTK6Q13882 451 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 TNFAIP8L3Q5GJ75 292 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 MFSD5Q6N075 450 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 MAP4K3Q8IVH8 894 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 EMC1Q8N766 993 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 UTP4Q969X6 686 aaKnown RBP13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 PLCD4Q9BRC7 762 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 PXMP2Q9NR77 195 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 PHTF1Q9UMS5 762 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 UBIAD1Q9Y5Z9 338 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 NUMBLQ9Y6R0 609 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 F5H423 210 aaPredicted RBP13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 VNN1O95497 513 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 CST3P01034 146 aaPredicted RBP13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 GDF10P55107 478 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 OGDHQ02218 1023 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 BNIP1Q12981 228 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 ANGEL2Q5VTE6 544 aaKnown RBP13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 DCUN1D2Q6PH85 259 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 TTC8Q8TAM2 541 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 PRR11Q96HE9 360 aaPredicted RBP13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 WRNIP1Q96S55 665 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 KIAA1683Q9H0B3 1180 aa13.88□□□□□ -0.19
SLC48A1-201ENST00000442218 CSDE1O75534 798 aaKnown RBP13.87□□□□□ -0.19
SLC48A1-201ENST00000442218 OAS1P00973 400 aaKnown RBP13.87□□□□□ -0.19
SLC48A1-201ENST00000442218 NR3C2P08235 984 aa13.87□□□□□ -0.19
SLC48A1-201ENST00000442218 PDHA1P08559 390 aa13.87□□□□□ -0.19
SLC48A1-201ENST00000442218 TNFAIP1Q13829 316 aa13.87□□□□□ -0.19
SLC48A1-201ENST00000442218 NBPF20Q3BBV1 942 aa13.87□□□□□ -0.19
SLC48A1-201ENST00000442218 ANKRD22Q5VYY1 191 aa13.87□□□□□ -0.19
SLC48A1-201ENST00000442218 FAM160B2Q86V87 743 aa13.87□□□□□ -0.19
SLC48A1-201ENST00000442218 RBBP8NLQ8NC74 664 aaPredicted RBP13.87□□□□□ -0.19
SLC48A1-201ENST00000442218 MIEF2Q96C03 454 aa13.87□□□□□ -0.19
SLC48A1-201ENST00000442218 FBXO40Q9UH90 709 aa13.87□□□□□ -0.19
SLC48A1-201ENST00000442218 EXOC7Q9UPT5 735 aa13.87□□□□□ -0.19
SLC48A1-201ENST00000442218 CHKBQ9Y259 395 aa13.87□□□□□ -0.19
SLC48A1-201ENST00000442218 CDH16O75309 829 aa13.87□□□□□ -0.19
SLC48A1-201ENST00000442218 ENTPD5O75356 428 aa13.87□□□□□ -0.19
SLC48A1-201ENST00000442218 PROSCO94903 275 aa13.87□□□□□ -0.19
SLC48A1-201ENST00000442218 MAPTP10636 758 aaKnown RBP13.87□□□□□ -0.19
SLC48A1-201ENST00000442218 GCAP28676 217 aa13.87□□□□□ -0.19
SLC48A1-201ENST00000442218 GTF2H1P32780 548 aa13.87□□□□□ -0.19
SLC48A1-201ENST00000442218 PRKCEQ02156 737 aa13.87□□□□□ -0.19
SLC48A1-201ENST00000442218 NFX1Q12986 1120 aaKnown RBP13.87□□□□□ -0.19
SLC48A1-201ENST00000442218 TFDP1Q14186 410 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms