RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 TCEAL6Q6IPX3 200 aa10.93□□□□□ -0.66
SYN3-204ENST00000441821 LRSAM1Q6UWE0 723 aa10.93□□□□□ -0.66
SYN3-204ENST00000441821 GPIHBP1Q8IV16 184 aa10.93□□□□□ -0.66
SYN3-204ENST00000441821 BPIFB1Q8TDL5 484 aa10.93□□□□□ -0.66
SYN3-204ENST00000441821 GATA6Q92908 595 aa10.93□□□□□ -0.66
SYN3-204ENST00000441821 TCEAL3Q969E4 200 aa10.93□□□□□ -0.66
SYN3-204ENST00000441821 C18orf25Q96B23 403 aaPredicted RBP10.93□□□□□ -0.66
SYN3-204ENST00000441821 IFT74Q96LB3 600 aa10.93□□□□□ -0.66
SYN3-204ENST00000441821 TBC1D32Q96NH3 1257 aa10.93□□□□□ -0.66
SYN3-204ENST00000441821 ACO2Q99798 780 aaKnown RBP10.93□□□□□ -0.66
SYN3-204ENST00000441821 POLR3CQ9BUI4 534 aaPredicted RBP10.93□□□□□ -0.66
SYN3-204ENST00000441821 DUSP15Q9H1R2 295 aaPredicted RBP10.93□□□□□ -0.66
SYN3-204ENST00000441821 DNAJC25Q9H1X3 360 aa10.93□□□□□ -0.66
SYN3-204ENST00000441821 CDT1Q9H211 546 aa10.93□□□□□ -0.66
SYN3-204ENST00000441821 CNTN3Q9P232 1028 aa10.93□□□□□ -0.66
SYN3-204ENST00000441821 ASB3Q9Y575 518 aa10.93□□□□□ -0.66
SYN3-204ENST00000441821 SMG1Q96Q15 3661 aaKnown RBP10.93□□□□□ -0.66
SYN3-204ENST00000441821 NUP210Q8TEM1 1887 aaPredicted RBP10.92□□□□□ -0.66
SYN3-204ENST00000441821 ARHGEF35A5YM69 484 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 RHOBTB1O94844 696 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 VNN2O95498 520 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 CAVIN2O95810 425 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 CEACAM1P13688 526 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 SPINK2P20155 84 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 CSRP1P21291 193 aaKnown RBP10.92□□□□□ -0.66
SYN3-204ENST00000441821 ALDH1A3P47895 512 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 OSTNP61366 133 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 YWHAHQ04917 246 aaPredicted RBP10.92□□□□□ -0.66
SYN3-204ENST00000441821 SCRN1Q12765 414 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 GRSF1Q12849 480 aaKnown RBP eCLIP10.92□□□□□ -0.66
SYN3-204ENST00000441821 DUSP4Q13115 394 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 GPR17Q13304 367 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 KARSQ15046 597 aaKnown RBP10.92□□□□□ -0.66
SYN3-204ENST00000441821 ELF2Q15723 593 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 TMEM196Q5HYL7 178 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 GPR158Q5T848 1215 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 SH3PXD2AQ5TCZ1 1133 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 GAREM2Q75VX8 874 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 SKAP1Q86WV1 359 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 KIFAP3Q92845 792 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 ACAP3Q96P50 834 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 PGLYRP2Q96PD5 576 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 CRISPLD1Q9H336 500 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 ATXN3LQ9H3M9 355 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 BRMS1Q9HCU9 246 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 THG1LQ9NWX6 298 aaKnown RBP10.92□□□□□ -0.66
SYN3-204ENST00000441821 SPAG17Q6Q759 2223 aa10.92□□□□□ -0.66
SYN3-204ENST00000441821 EML5Q05BV3 1969 aa10.91□□□□□ -0.66
SYN3-204ENST00000441821 BCLAF3A2AJT9 711 aaKnown RBP10.91□□□□□ -0.66
SYN3-204ENST00000441821 OR6C75A6NL08 312 aa10.91□□□□□ -0.66
SYN3-204ENST00000441821 M0QZQ0 153 aa10.91□□□□□ -0.66
SYN3-204ENST00000441821 WNT7AO00755 349 aa10.91□□□□□ -0.66
SYN3-204ENST00000441821 TRDMT1O14717 391 aaKnown RBP10.91□□□□□ -0.66
SYN3-204ENST00000441821 MCF2P10911 925 aa10.91□□□□□ -0.66
SYN3-204ENST00000441821 RPA1P27694 616 aa10.91□□□□□ -0.66
SYN3-204ENST00000441821 MCM2P49736 904 aa10.91□□□□□ -0.66
SYN3-204ENST00000441821 CREB5Q02930 508 aa10.91□□□□□ -0.66
SYN3-204ENST00000441821 RING1Q06587 406 aa10.91□□□□□ -0.66
SYN3-204ENST00000441821 ZNF568Q3ZCX4 644 aa10.91□□□□□ -0.66
SYN3-204ENST00000441821 ARHGAP15Q53QZ3 475 aa10.91□□□□□ -0.66
SYN3-204ENST00000441821 CENPPQ6IPU0 288 aa10.91□□□□□ -0.66
SYN3-204ENST00000441821 FSTL4Q6MZW2 842 aa10.91□□□□□ -0.66
SYN3-204ENST00000441821 DNAJB7Q7Z6W7 309 aaPredicted RBP10.91□□□□□ -0.66
SYN3-204ENST00000441821 WASF1Q92558 559 aa10.91□□□□□ -0.66
SYN3-204ENST00000441821 PSMG2Q969U7 264 aa10.91□□□□□ -0.66
SYN3-204ENST00000441821 FAM83CQ9BQN1 747 aa10.91□□□□□ -0.66
SYN3-204ENST00000441821 SCNM1Q9BWG6 230 aa10.91□□□□□ -0.66
SYN3-204ENST00000441821 MRPL4Q9BYD3 311 aaKnown RBP10.91□□□□□ -0.66
SYN3-204ENST00000441821 TM6SF1Q9BZW5 370 aa10.91□□□□□ -0.66
SYN3-204ENST00000441821 TASP1Q9H6P5 420 aa10.91□□□□□ -0.66
SYN3-204ENST00000441821 TMEM134Q9H6X4 195 aa10.91□□□□□ -0.66
SYN3-204ENST00000441821 EBF1Q9UH73 591 aa10.91□□□□□ -0.66
SYN3-204ENST00000441821 PHLPP2Q6ZVD8 1323 aa10.9□□□□□ -0.66
SYN3-204ENST00000441821 IGF2RP11717 2491 aa10.9□□□□□ -0.66
SYN3-204ENST00000441821 LNP1A1A4G5 178 aa10.9□□□□□ -0.66
SYN3-204ENST00000441821 MEFVO15553 781 aaPredicted RBP10.9□□□□□ -0.66
SYN3-204ENST00000441821 REC8O95072 547 aa10.9□□□□□ -0.66
SYN3-204ENST00000441821 PRAMEF12O95522 483 aa10.9□□□□□ -0.66
SYN3-204ENST00000441821 TOP3BO95985 862 aaKnown RBP10.9□□□□□ -0.66
SYN3-204ENST00000441821 OR4Q2P0C623 313 aa10.9□□□□□ -0.66
SYN3-204ENST00000441821 MUTP22033 750 aa10.9□□□□□ -0.66
SYN3-204ENST00000441821 PROZP22891 400 aa10.9□□□□□ -0.66
SYN3-204ENST00000441821 GABRR2P28476 465 aa10.9□□□□□ -0.66
SYN3-204ENST00000441821 AMPD2Q01433 879 aa10.9□□□□□ -0.66
SYN3-204ENST00000441821 RUNX3Q13761 415 aa10.9□□□□□ -0.66
SYN3-204ENST00000441821 ITIH5Q86UX2 942 aa10.9□□□□□ -0.66
SYN3-204ENST00000441821 ERMNQ8TAM6 284 aa10.9□□□□□ -0.66
SYN3-204ENST00000441821 TMEM60Q9H2L4 133 aa10.9□□□□□ -0.66
SYN3-204ENST00000441821 POLD4Q9HCU8 107 aa10.9□□□□□ -0.66
SYN3-204ENST00000441821 GKN1Q9NS71 199 aa10.9□□□□□ -0.66
SYN3-204ENST00000441821 HSFX1Q9UBD0 423 aa10.9□□□□□ -0.66
SYN3-204ENST00000441821 ORC3Q9UBD5 711 aaPredicted RBP10.9□□□□□ -0.66
SYN3-204ENST00000441821 LHX6Q9UPM6 363 aa10.9□□□□□ -0.66
SYN3-204ENST00000441821 SLC27A5Q9Y2P5 690 aa10.9□□□□□ -0.66
SYN3-204ENST00000441821 KIF26AQ9ULI4 1882 aaPredicted RBP10.89□□□□□ -0.67
SYN3-204ENST00000441821 SDK1Q7Z5N4 2213 aa10.89□□□□□ -0.67
SYN3-204ENST00000441821 FASNP49327 2511 aaKnown RBP10.89□□□□□ -0.67
SYN3-204ENST00000441821 PKD1L2Q7Z442 2459 aa10.89□□□□□ -0.67
SYN3-204ENST00000441821 CDX4O14627 284 aaPredicted RBP10.89□□□□□ -0.67
SYN3-204ENST00000441821 ABLIM1O14639 778 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms