RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 ADM5C9JUS6 153 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 CCDC22O60826 627 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 FAM13AO94988 1023 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 ZWINTO95229 277 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 PYGLP06737 847 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 DLATP10515 647 aaKnown RBP12.59□□□□□ -0.39
LTBR-203ENST00000441074 KCNA1Q09470 495 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 AP1B1Q10567 949 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 KPNB1Q14974 876 aaKnown RBP12.59□□□□□ -0.39
LTBR-203ENST00000441074 GSTA3Q16772 222 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 CBWD6Q4V339 395 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 CBWD3Q5JTY5 395 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 CBWD5Q5RIA9 395 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 ZC3H18Q86VM9 953 aaKnown RBP12.59□□□□□ -0.39
LTBR-203ENST00000441074 PPFIBP2Q8ND30 876 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 ZNF398Q8TD17 642 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 GRK7Q8WTQ7 553 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 RUSC1Q9BVN2 902 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 PLVAPQ9BX97 442 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 TUFT1Q9NNX1 390 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 SMG5Q9UPR3 1016 aaKnown RBP12.59□□□□□ -0.39
LTBR-203ENST00000441074 SH3BP1Q9Y3L3 701 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 RSPH10B2B2RC85 870 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 SMAPO00193 183 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 CLDN3O15551 220 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 ABHD2P08910 425 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 RSPH10BP0C881 870 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 ATF2P15336 505 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 TMED2Q15363 201 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 CTC1Q2NKJ3 1217 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 PHLDB3Q6NSJ2 640 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 DSTYKQ6XUX3 929 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 HS2ST1Q7LGA3 356 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 NLRP9Q7RTR0 991 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 LDHDQ86WU2 507 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 PSPC1Q8WXF1 523 aaKnown RBP12.59□□□□□ -0.39
LTBR-203ENST00000441074 NR1H4Q96RI1 486 aaPredicted RBP12.59□□□□□ -0.39
LTBR-203ENST00000441074 CCDC28BQ9BUN5 200 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 ZMYM2Q9UBW7 1377 aa12.59□□□□□ -0.39
LTBR-203ENST00000441074 NFIBO00712 420 aa12.58□□□□□ -0.4
LTBR-203ENST00000441074 CAPN9O14815 690 aa12.58□□□□□ -0.4
LTBR-203ENST00000441074 SPAG7O75391 227 aa12.58□□□□□ -0.4
LTBR-203ENST00000441074 PSMG1O95456 288 aa12.58□□□□□ -0.4
LTBR-203ENST00000441074 GAS8O95995 478 aa12.58□□□□□ -0.4
LTBR-203ENST00000441074 CYP3A4P08684 503 aa12.58□□□□□ -0.4
LTBR-203ENST00000441074 BCRP11274 1271 aa12.58□□□□□ -0.4
LTBR-203ENST00000441074 GSTT1P30711 240 aa12.58□□□□□ -0.4
LTBR-203ENST00000441074 RANBP1P43487 201 aa12.58□□□□□ -0.4
LTBR-203ENST00000441074 HMGCS2P54868 508 aa12.58□□□□□ -0.4
LTBR-203ENST00000441074 MOB2Q70IA6 237 aa12.58□□□□□ -0.4
LTBR-203ENST00000441074 CLNKQ7Z7G1 428 aa12.58□□□□□ -0.4
LTBR-203ENST00000441074 NCSTNQ92542 709 aa12.58□□□□□ -0.4
LTBR-203ENST00000441074 EIF2AK1Q9BQI3 630 aaKnown RBP12.58□□□□□ -0.4
LTBR-203ENST00000441074 BTBD10Q9BSF8 475 aa12.58□□□□□ -0.4
LTBR-203ENST00000441074 SYNCQ9H7C4 482 aa12.58□□□□□ -0.4
LTBR-203ENST00000441074 RAVER2Q9HCJ3 691 aaKnown RBP12.58□□□□□ -0.4
LTBR-203ENST00000441074 STX18Q9P2W9 335 aaKnown RBP12.58□□□□□ -0.4
LTBR-203ENST00000441074 FRMD4BQ9Y2L6 1034 aa12.58□□□□□ -0.4
LTBR-203ENST00000441074 SLC4A7Q9Y6M7 1214 aa12.58□□□□□ -0.4
LTBR-203ENST00000441074 ZNF536O15090 1300 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 MSH4O15457 936 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 GSC2O15499 205 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 LRRN2O75325 713 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 KRT36O76013 467 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 GZMAP12544 262 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 ADCY8P40145 1251 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 SERPINB4P48594 390 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 MYL7Q01449 175 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 ACSBG2Q5FVE4 666 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 RINT1Q6NUQ1 792 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 TDRPQ86YL5 185 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 BBOF1Q8ND07 529 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 VCX3BQ9H321 246 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 PARVGQ9HBI0 331 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 VCX3AQ9NNX9 186 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 DDX43Q9NXZ2 648 aaKnown RBP12.57□□□□□ -0.4
LTBR-203ENST00000441074 KCND2Q9NZV8 630 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 SENP1Q9P0U3 644 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 LARSQ9P2J5 1176 aaKnown RBP12.57□□□□□ -0.4
LTBR-203ENST00000441074 ZNF212Q9UDV6 495 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 MAP3K7O43318 606 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 CREB3O43889 395 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 EXOC3O60645 756 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 TBX10O75333 385 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 CYP1A2P05177 515 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 PTPRAP18433 802 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 MYBPC2Q14324 1141 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 CEP128Q6ZU80 1094 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 OTOAQ7RTW8 1153 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 MTDHQ86UE4 582 aaKnown RBP12.57□□□□□ -0.4
LTBR-203ENST00000441074 CPNE8Q86YQ8 564 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 CCNJLQ8IV13 435 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 KLHL23Q8NBE8 558 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 LMO3Q8TAP4 145 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 ZNF564Q8TBZ8 553 aaPredicted RBP12.57□□□□□ -0.4
LTBR-203ENST00000441074 CHURC1Q8WUH1 139 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 PWWP2AQ96N64 755 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 RANBP17Q9H2T7 1088 aaKnown RBP12.57□□□□□ -0.4
LTBR-203ENST00000441074 TRABDQ9H4I3 376 aa12.57□□□□□ -0.4
LTBR-203ENST00000441074 CHST7Q9NS84 486 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms