RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 ABCB4P21439 1286 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 HOXA11P31270 313 aaPredicted RBP14.03□□□□□ -0.16
ACTN4-204ENST00000440400 MAN1A1P33908 653 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 GGCXP38435 758 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 NNTQ13423 1086 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 MFSD10Q14728 455 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 NBPF20Q3BBV1 942 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 SLC10A6Q3KNW5 377 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 PLEKHA7Q6IQ23 1121 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 ZNF518BQ9C0D4 1074 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 SMARCAL1Q9NZC9 954 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 NOC2LQ9Y3T9 749 aaKnown RBP14.03□□□□□ -0.16
ACTN4-204ENST00000440400 DOCK3Q8IZD9 2030 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 LACTBL1A8MY62 500 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 TNNC2P02585 160 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 VTNP04004 478 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 AXLP30530 894 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 XKR4Q5GH76 650 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 C1orf127Q8N9H9 656 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 ZNF564Q8TBZ8 553 aaPredicted RBP14.03□□□□□ -0.16
ACTN4-204ENST00000440400 CAVIN3Q969G5 261 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 GOLPH3Q9H4A6 298 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 STIM2Q9P246 746 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 SH3BP1Q9Y3L3 701 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 PCDHA3Q9Y5H8 950 aa14.03□□□□□ -0.16
ACTN4-204ENST00000440400 CXCL8P10145 99 aa14.02□□□□□ -0.16
ACTN4-204ENST00000440400 KRT5P13647 590 aa14.02□□□□□ -0.16
ACTN4-204ENST00000440400 CCNHP51946 323 aaPredicted RBP14.02□□□□□ -0.16
ACTN4-204ENST00000440400 PPARDQ03181 441 aa14.02□□□□□ -0.16
ACTN4-204ENST00000440400 ZBTB6Q15916 424 aa14.02□□□□□ -0.16
ACTN4-204ENST00000440400 NUP85Q9BW27 656 aa14.02□□□□□ -0.16
ACTN4-204ENST00000440400 SLITRK6Q9H5Y7 841 aa14.02□□□□□ -0.16
ACTN4-204ENST00000440400 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.02□□□□□ -0.161e-5■□□□□ 9.3
ACTN4-204ENST00000440400 ITGA11Q9UKX5 1188 aa14.02□□□□□ -0.16
ACTN4-204ENST00000440400 AKT3Q9Y243 479 aa14.02□□□□□ -0.16
ACTN4-204ENST00000440400 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.02□□□□□ -0.16
ACTN4-204ENST00000440400 KPNA6O60684 536 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 PAEPP09466 180 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 GNA15P30679 374 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 PSEN2P49810 448 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 YWHAEP62258 255 aaKnown RBP14.02□□□□□ -0.17
ACTN4-204ENST00000440400 IGBP1P78318 339 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 ELMO3Q96BJ8 720 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 CFHR5Q9BXR6 569 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 LHX5Q9H2C1 402 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 CYP3A43Q9HB55 503 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 PCDHB4Q9Y5E5 795 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 FRMPD3Q5JV73 1810 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 NFICP08651 508 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 CYBAP13498 195 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 SLC1A1P43005 524 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 AARSP49588 968 aaKnown RBP eCLIP14.02□□□□□ -0.179e-10■■■■■ 48
ACTN4-204ENST00000440400 INCA1Q0VD86 236 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 CCL14Q16627 93 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 CYP1B1Q16678 543 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 PPP1R15BQ5SWA1 713 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 CCDC70Q6NSX1 233 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 ALG3Q92685 438 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 ZNF653Q96CK0 615 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 KATNAL1Q9BW62 490 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 IMPG2Q9BZV3 1241 aa14.02□□□□□ -0.17
ACTN4-204ENST00000440400 KAT6AQ92794 2004 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 CA12O43570 354 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 GJA9P57773 515 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 GNGT1P63211 74 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 TNNC1P63316 161 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 CRHR2Q13324 411 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 JADE1Q6IE81 842 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 NME8Q8N427 588 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 OTUD6BQ8N6M0 293 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 TRPV1Q8NER1 839 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 HDAC7Q8WUI4 952 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 CISHQ9NSE2 258 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 CTTNBP2NLQ9P2B4 639 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 DMGDHQ9UI17 866 aaKnown RBP14.01□□□□□ -0.17
ACTN4-204ENST00000440400 EME2A4GXA9 379 aaPredicted RBP14.01□□□□□ -0.17
ACTN4-204ENST00000440400 DARSP14868 501 aaKnown RBP14.01□□□□□ -0.17
ACTN4-204ENST00000440400 HSPA6P17066 643 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 MMP8P22894 467 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 CLNS1AP54105 237 aaKnown RBP14.01□□□□□ -0.17
ACTN4-204ENST00000440400 PPP2R5EQ16537 467 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 RUFY4Q6ZNE9 571 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 FAM76AQ8TAV0 307 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 WHAMMQ8TF30 809 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 SNX27Q96L92 541 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 PSMB7Q99436 277 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 TCHPQ9BT92 498 aa14.01□□□□□ -0.17
ACTN4-204ENST00000440400 TRIM6Q9C030 488 aaPredicted RBP14.01□□□□□ -0.17
ACTN4-204ENST00000440400 CAPN15O75808 1086 aa14□□□□□ -0.17
ACTN4-204ENST00000440400 CFHP08603 1231 aa14□□□□□ -0.17
ACTN4-204ENST00000440400 RPSAP08865 295 aaKnown RBP14□□□□□ -0.17
ACTN4-204ENST00000440400 TMEM191BP0C7N4 346 aa14□□□□□ -0.17
ACTN4-204ENST00000440400 COMTP21964 271 aa14□□□□□ -0.17
ACTN4-204ENST00000440400 EIF4BP23588 611 aaKnown RBP14□□□□□ -0.17
ACTN4-204ENST00000440400 PEX19P40855 299 aa14□□□□□ -0.17
ACTN4-204ENST00000440400 PURAQ00577 322 aaKnown RBP14□□□□□ -0.17
ACTN4-204ENST00000440400 E2F5Q15329 346 aa14□□□□□ -0.17
ACTN4-204ENST00000440400 ZNF699Q32M78 642 aa14□□□□□ -0.17
ACTN4-204ENST00000440400 PRAMEF19Q5SWL8 479 aa14□□□□□ -0.17
ACTN4-204ENST00000440400 TMEM270Q6UE05 265 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms