RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 CCNYL1Q8N7R7 359 aa12.72□□□□□ -0.37
NEK1-201ENST00000439128 SKA1Q96BD8 255 aa12.72□□□□□ -0.37
NEK1-201ENST00000439128 ZNF558Q96NG5 402 aa12.72□□□□□ -0.37
NEK1-201ENST00000439128 MTMR12Q9C0I1 747 aa12.72□□□□□ -0.37
NEK1-201ENST00000439128 FBXO2Q9UK22 296 aaPredicted RBP12.72□□□□□ -0.37
NEK1-201ENST00000439128 SALL1Q9NSC2 1324 aa12.72□□□□□ -0.37
NEK1-201ENST00000439128 CCDC151A5D8V7 595 aa12.72□□□□□ -0.37
NEK1-201ENST00000439128 KIF3CO14782 793 aa12.72□□□□□ -0.37
NEK1-201ENST00000439128 HOXC6P09630 235 aa12.72□□□□□ -0.37
NEK1-201ENST00000439128 FGFR2P21802 821 aa12.72□□□□□ -0.37
NEK1-201ENST00000439128 LHX1P48742 406 aa12.72□□□□□ -0.37
NEK1-201ENST00000439128 LIG3P49916 1009 aa12.72□□□□□ -0.37
NEK1-201ENST00000439128 FKBP1CQ5VVH2 108 aa12.72□□□□□ -0.37
NEK1-201ENST00000439128 SHC4Q6S5L8 630 aa12.72□□□□□ -0.37
NEK1-201ENST00000439128 NCLNQ969V3 563 aa12.72□□□□□ -0.37
NEK1-201ENST00000439128 PANX2Q96RD6 677 aa12.72□□□□□ -0.37
NEK1-201ENST00000439128 RSAD1Q9HA92 442 aa12.72□□□□□ -0.37
NEK1-201ENST00000439128 CDC23Q9UJX2 597 aa12.72□□□□□ -0.37
NEK1-201ENST00000439128 ZNF541Q9H0D2 1346 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 RTN2O75298 545 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 HMGCRP04035 888 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 GIPC2Q8TF65 315 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 SCUBE2Q9NQ36 999 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 INTS9Q9NV88 658 aaKnown RBP12.71□□□□□ -0.37
NEK1-201ENST00000439128 DDIT4Q9NX09 232 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 MX2P20592 715 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 CCDC144BQ3MJ40 725 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 KCTD16Q68DU8 428 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 WDR48Q8TAF3 677 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 SPDL1Q96EA4 605 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 RUSC1Q9BVN2 902 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 IDI2Q9BXS1 227 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 TMEM60Q9H2L4 133 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 RNF14Q9UBS8 474 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 PCDHB5Q9Y5E4 795 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 TLR2O60603 784 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 PCK1P35558 622 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 SESN2P58004 480 aaPredicted RBP12.71□□□□□ -0.37
NEK1-201ENST00000439128 ZKSCAN8Q15776 578 aaPredicted RBP12.71□□□□□ -0.37
NEK1-201ENST00000439128 TMCO4Q5TGY1 634 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 OVOS1Q6IE37 1185 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 CACUL1Q86Y37 369 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 UPF1Q92900 1129 aaKnown RBP eCLIP12.71□□□□□ -0.37
NEK1-201ENST00000439128 XPO6Q96QU8 1125 aaKnown RBP12.71□□□□□ -0.37
NEK1-201ENST00000439128 VPS28Q9UK41 221 aa12.71□□□□□ -0.37
NEK1-201ENST00000439128 M0QYT0 321 aa12.71□□□□□ -0.38
NEK1-201ENST00000439128 KRT38O76015 456 aa12.71□□□□□ -0.38
NEK1-201ENST00000439128 SREBF1P36956 1147 aa12.71□□□□□ -0.38
NEK1-201ENST00000439128 COPS2P61201 443 aa12.71□□□□□ -0.38
NEK1-201ENST00000439128 SNRPFP62306 86 aaKnown RBP12.71□□□□□ -0.38
NEK1-201ENST00000439128 PDAP1Q13442 181 aaKnown RBP12.71□□□□□ -0.38
NEK1-201ENST00000439128 PREPLQ4J6C6 727 aaPredicted RBP12.71□□□□□ -0.38
NEK1-201ENST00000439128 RIOX2Q8IUF8 465 aa12.71□□□□□ -0.38
NEK1-201ENST00000439128 SPATA16Q9BXB7 569 aa12.71□□□□□ -0.38
NEK1-201ENST00000439128 METTL5Q9NRN9 209 aaKnown RBP12.71□□□□□ -0.38
NEK1-201ENST00000439128 IQGAP1P46940 1657 aa12.71□□□□□ -0.38
NEK1-201ENST00000439128 COPEO14579 308 aa12.71□□□□□ -0.38
NEK1-201ENST00000439128 ZNF189O75820 626 aaPredicted RBP12.71□□□□□ -0.38
NEK1-201ENST00000439128 GPD1P21695 349 aa12.71□□□□□ -0.38
NEK1-201ENST00000439128 PPP3CCP48454 512 aa12.71□□□□□ -0.38
NEK1-201ENST00000439128 ZRANB3Q5FWF4 1079 aa12.71□□□□□ -0.38
NEK1-201ENST00000439128 PTRHD1Q6GMV3 140 aaKnown RBP12.71□□□□□ -0.38
NEK1-201ENST00000439128 PPM1NQ8N819 430 aa12.71□□□□□ -0.38
NEK1-201ENST00000439128 PKP3Q9Y446 797 aa12.71□□□□□ -0.38
NEK1-201ENST00000439128 ORC6Q9Y5N6 252 aa12.71□□□□□ -0.38
NEK1-201ENST00000439128 CNTNAP2Q9UHC6 1331 aa12.7□□□□□ -0.38
NEK1-201ENST00000439128 MAPK13O15264 365 aa12.7□□□□□ -0.38
NEK1-201ENST00000439128 CLCN1P35523 988 aa12.7□□□□□ -0.38
NEK1-201ENST00000439128 GNGT1P63211 74 aa12.7□□□□□ -0.38
NEK1-201ENST00000439128 C7orf25Q9BPX7 421 aa12.7□□□□□ -0.38
NEK1-201ENST00000439128 PSMD3O43242 534 aa12.7□□□□□ -0.38
NEK1-201ENST00000439128 SMIM24O75264 130 aa12.7□□□□□ -0.38
NEK1-201ENST00000439128 FMO2Q99518 471 aa12.7□□□□□ -0.38
NEK1-201ENST00000439128 SMPD4Q9NXE4 827 aa12.7□□□□□ -0.38
NEK1-201ENST00000439128 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.7□□□□□ -0.38
NEK1-201ENST00000439128 SNX24Q9Y343 169 aa12.7□□□□□ -0.38
NEK1-201ENST00000439128 TM4SF1P30408 202 aa12.7□□□□□ -0.38
NEK1-201ENST00000439128 FXR2P51116 673 aaKnown RBP eCLIP12.7□□□□□ -0.38
NEK1-201ENST00000439128 SOX10P56693 466 aa12.7□□□□□ -0.38
NEK1-201ENST00000439128 SLC7A5Q01650 507 aa12.7□□□□□ -0.38
NEK1-201ENST00000439128 ART3Q13508 389 aa12.7□□□□□ -0.38
NEK1-201ENST00000439128 NFE2Q16621 373 aaPredicted RBP12.7□□□□□ -0.38
NEK1-201ENST00000439128 TSGA10IPQ3SY00 556 aa12.7□□□□□ -0.38
NEK1-201ENST00000439128 RD3Q7Z3Z2 195 aa12.7□□□□□ -0.38
NEK1-201ENST00000439128 MAGEB10Q96LZ2 347 aaPredicted RBP12.7□□□□□ -0.38
NEK1-201ENST00000439128 PXDNQ92626 1479 aa12.7□□□□□ -0.38
NEK1-201ENST00000439128 KRT14P02533 472 aa12.7□□□□□ -0.38
NEK1-201ENST00000439128 FASTKD1Q53R41 847 aaKnown RBP12.7□□□□□ -0.38
NEK1-201ENST00000439128 WNT8AQ9H1J5 351 aa12.7□□□□□ -0.38
NEK1-201ENST00000439128 DDX43Q9NXZ2 648 aaKnown RBP12.7□□□□□ -0.38
NEK1-201ENST00000439128 CRLS1Q9UJA2 301 aa12.7□□□□□ -0.38
NEK1-201ENST00000439128 NCKAP1Q9Y2A7 1128 aa12.7□□□□□ -0.38
NEK1-201ENST00000439128 RASGRF2O14827 1237 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 MAPK9P45984 424 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 TAF11Q15544 211 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 IPMKQ8NFU5 416 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 PPWD1Q96BP3 646 aaKnown RBP12.69□□□□□ -0.38
NEK1-201ENST00000439128 TLR8Q9NR97 1041 aaKnown RBP12.69□□□□□ -0.38
NEK1-201ENST00000439128 ABHD10Q9NUJ1 306 aa12.69□□□□□ -0.38
NEK1-201ENST00000439128 PODXLO00592 558 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms