RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 CD300LGQ6UXG3 332 aa12.26□□□□□ -0.45
CSTF3-203ENST00000438862 ARID3BQ8IVW6 561 aaPredicted RBP12.26□□□□□ -0.45
CSTF3-203ENST00000438862 SHKBP1Q8TBC3 707 aa12.26□□□□□ -0.45
CSTF3-203ENST00000438862 ASAP3Q8TDY4 903 aa12.26□□□□□ -0.45
CSTF3-203ENST00000438862 ADPGKQ9BRR6 497 aa12.26□□□□□ -0.45
CSTF3-203ENST00000438862 LSG1Q9H089 658 aaKnown RBP12.26□□□□□ -0.45
CSTF3-203ENST00000438862 AFF4Q9UHB7 1163 aaKnown RBP12.26□□□□□ -0.45
CSTF3-203ENST00000438862 DDX25Q9UHL0 483 aaKnown RBP12.26□□□□□ -0.45
CSTF3-203ENST00000438862 VAV3Q9UKW4 847 aa12.26□□□□□ -0.45
CSTF3-203ENST00000438862 LOC400499M0QZD8 3231 aa12.26□□□□□ -0.45
CSTF3-203ENST00000438862 UPK3BL1B0FP48 263 aa12.25□□□□□ -0.45
CSTF3-203ENST00000438862 UPK3BL2E5RIL1 263 aa12.25□□□□□ -0.45
CSTF3-203ENST00000438862 SYN3O14994 580 aa12.25□□□□□ -0.45
CSTF3-203ENST00000438862 TBX3O15119 743 aa12.25□□□□□ -0.45
CSTF3-203ENST00000438862 PRKCBP05771 671 aa12.25□□□□□ -0.45
CSTF3-203ENST00000438862 GLRA2P23416 452 aa12.25□□□□□ -0.45
CSTF3-203ENST00000438862 IGFBP6P24592 240 aaPredicted RBP12.25□□□□□ -0.45
CSTF3-203ENST00000438862 GBP1P32455 592 aa12.25□□□□□ -0.45
CSTF3-203ENST00000438862 BRCC3P46736 316 aa12.25□□□□□ -0.45
CSTF3-203ENST00000438862 NLRP5P59047 1200 aa12.25□□□□□ -0.45
CSTF3-203ENST00000438862 IRX4P78413 519 aa12.25□□□□□ -0.45
CSTF3-203ENST00000438862 AMPD2Q01433 879 aa12.25□□□□□ -0.45
CSTF3-203ENST00000438862 MRPL58Q14197 206 aaKnown RBP12.25□□□□□ -0.45
CSTF3-203ENST00000438862 FAM187BQ17R55 369 aa12.25□□□□□ -0.45
CSTF3-203ENST00000438862 RNF20Q5VTR2 975 aa12.25□□□□□ -0.45
CSTF3-203ENST00000438862 PPP4R3AQ6IN85 833 aa12.25□□□□□ -0.45
CSTF3-203ENST00000438862 ZFYVE19Q96K21 471 aa12.25□□□□□ -0.45
CSTF3-203ENST00000438862 PPP1R10Q96QC0 940 aaKnown RBP12.25□□□□□ -0.45
CSTF3-203ENST00000438862 MKNK1Q9BUB5 465 aa12.25□□□□□ -0.45
CSTF3-203ENST00000438862 CXCL16Q9H2A7 254 aa12.25□□□□□ -0.45
CSTF3-203ENST00000438862 FZD8Q9H461 694 aa12.25□□□□□ -0.45
CSTF3-203ENST00000438862 UPF2Q9HAU5 1272 aaKnown RBP12.25□□□□□ -0.45
CSTF3-203ENST00000438862 THG1LQ9NWX6 298 aaKnown RBP12.25□□□□□ -0.45
CSTF3-203ENST00000438862 EVLQ9UI08 416 aaPredicted RBP12.25□□□□□ -0.45
CSTF3-203ENST00000438862 FBXL5Q9UKA1 691 aa12.25□□□□□ -0.45
CSTF3-203ENST00000438862 NAP1L2Q9ULW6 460 aaPredicted RBP12.25□□□□□ -0.45
CSTF3-203ENST00000438862 KIF26AQ9ULI4 1882 aaPredicted RBP12.25□□□□□ -0.45
CSTF3-203ENST00000438862 ASCC3Q8N3C0 2202 aaKnown RBP12.25□□□□□ -0.45
CSTF3-203ENST00000438862 A0A1W2PRU2 124 aa12.24□□□□□ -0.45
CSTF3-203ENST00000438862 I3L4J1 428 aa12.24□□□□□ -0.45
CSTF3-203ENST00000438862 TRDMT1O14717 391 aaKnown RBP12.24□□□□□ -0.45
CSTF3-203ENST00000438862 ZBTB39O15060 712 aa12.24□□□□□ -0.45
CSTF3-203ENST00000438862 DCLK1O15075 740 aa12.24□□□□□ -0.45
CSTF3-203ENST00000438862 MEFVO15553 781 aaPredicted RBP12.24□□□□□ -0.45
CSTF3-203ENST00000438862 APBB3O95704 486 aa12.24□□□□□ -0.45
CSTF3-203ENST00000438862 WEE1P30291 646 aa12.24□□□□□ -0.45
CSTF3-203ENST00000438862 SIM1P81133 766 aaPredicted RBP12.24□□□□□ -0.45
CSTF3-203ENST00000438862 PLD1Q13393 1074 aa12.24□□□□□ -0.45
CSTF3-203ENST00000438862 USP39Q53GS9 565 aaKnown RBP12.24□□□□□ -0.45
CSTF3-203ENST00000438862 PMS2CLQ68D20 193 aa12.24□□□□□ -0.45
CSTF3-203ENST00000438862 SYT13Q7L8C5 426 aa12.24□□□□□ -0.45
CSTF3-203ENST00000438862 CYP2U1Q7Z449 544 aa12.24□□□□□ -0.45
CSTF3-203ENST00000438862 BPIFB1Q8TDL5 484 aa12.24□□□□□ -0.45
CSTF3-203ENST00000438862 EXOC4Q96A65 974 aa12.24□□□□□ -0.45
CSTF3-203ENST00000438862 ATG2BQ96BY7 2078 aa12.24□□□□□ -0.45
CSTF3-203ENST00000438862 LRRC3BQ96PB8 259 aa12.24□□□□□ -0.45
CSTF3-203ENST00000438862 LRRC3Q9BY71 257 aa12.24□□□□□ -0.45
CSTF3-203ENST00000438862 RNF26Q9BY78 433 aaPredicted RBP12.24□□□□□ -0.45
CSTF3-203ENST00000438862 PDZD7Q9H5P4 517 aa12.24□□□□□ -0.45
CSTF3-203ENST00000438862 ANO2Q9NQ90 1003 aa12.24□□□□□ -0.45
CSTF3-203ENST00000438862 ANKEF1Q9NU02 776 aa12.24□□□□□ -0.45
CSTF3-203ENST00000438862 RGL1Q9NZL6 768 aa12.24□□□□□ -0.45
CSTF3-203ENST00000438862 VPS54Q9P1Q0 977 aa12.24□□□□□ -0.45
CSTF3-203ENST00000438862 THADAQ6YHU6 1953 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 FREM2Q5SZK8 3169 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 CCDC194A0A1B0GVG4 234 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 FGF19O95750 216 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 DRD1P21728 446 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 TNK2Q07912 1038 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 C19orf57Q0VDD7 668 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 TMEM132AQ24JP5 1023 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 ZNF423Q2M1K9 1284 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 FBXO43Q4G163 708 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 CTXN3Q4LDR2 81 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 FSTL4Q6MZW2 842 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 PIP4P1Q86T03 277 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 NOSTRINQ8IVI9 506 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 ZBTB8OSQ8IWT0 167 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 CHCHD4Q8N4Q1 142 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 C3orf58Q8NDZ4 430 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 ADAM32Q8TC27 787 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 DYDC2Q96IM9 177 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 TCEANC2Q96MN5 208 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 BBC3Q96PG8 261 aaPredicted RBP12.23□□□□□ -0.45
CSTF3-203ENST00000438862 HHIPQ96QV1 700 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 NUSAP1Q9BXS6 441 aaKnown RBP12.23□□□□□ -0.45
CSTF3-203ENST00000438862 KCNMB3Q9NPA1 279 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 CACNA2D2Q9NY47 1150 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 PCDHA4Q9UN74 947 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 GDAQ9Y2T3 454 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 ABCA7Q8IZY2 2146 aa12.23□□□□□ -0.45
CSTF3-203ENST00000438862 NUP210Q8TEM1 1887 aaPredicted RBP12.23□□□□□ -0.45
CSTF3-203ENST00000438862 TRIP11Q15643 1979 aa12.22□□□□□ -0.45
CSTF3-203ENST00000438862 SPAARA0A1B0GVQ0 90 aa12.22□□□□□ -0.45
CSTF3-203ENST00000438862 LRRIQ4A6NIV6 560 aa12.22□□□□□ -0.45
CSTF3-203ENST00000438862 PATE3B3GLJ2 98 aa12.22□□□□□ -0.45
CSTF3-203ENST00000438862 SLC37A4O43826 429 aa12.22□□□□□ -0.45
CSTF3-203ENST00000438862 SLITRK3O94933 977 aa12.22□□□□□ -0.45
CSTF3-203ENST00000438862 DGKEP52429 567 aa12.22□□□□□ -0.45
CSTF3-203ENST00000438862 EPHB3P54753 998 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms