RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 FDXRP22570 491 aa4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 FXR1P51114 621 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 KIAA0895LQ68EN5 471 aa4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 TTC7BQ86TV6 843 aa4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 FAM98AQ8NCA5 519 aaKnown RBP4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 CAVIN3Q969G5 261 aa4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 RAB24Q969Q5 203 aa4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 PRDM13Q9H4Q3 707 aa4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 TCF7L1Q9HCS4 588 aa4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 SIDT1Q9NXL6 827 aaKnown RBP4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 CTTNBP2NLQ9P2B4 639 aa4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 IP6K2Q9UHH9 426 aa4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 LUC7L2Q9Y383 392 aaKnown RBP4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 RIMS1Q86UR5 1692 aaKnown RBP4.32□□□□□ -1.72
HMGB3P12-201ENST00000438745 EPRSP07814 1512 aaKnown RBP4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 PRSS29PA6NIE9 313 aa4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 SNUPNO95149 360 aaKnown RBP4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 FBLP22087 321 aaKnown RBP4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 RECQLP46063 649 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 RARRES1P49788 294 aa4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 RAB27AP51159 221 aa4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 MCL1Q07820 350 aa4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 SNAPC2Q13487 334 aa4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 ZNF169Q14929 603 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 Q6ZNX1 250 aa4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 COLGALT2Q8IYK4 626 aa4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 SIMC1Q8NDZ2 872 aa4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 NTN5Q8WTR8 489 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 KAT5Q92993 513 aa4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 CHMP4CQ96CF2 233 aa4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 RNF31Q96EP0 1072 aa4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 LRIG1Q96JA1 1093 aa4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 PDLIM2Q96JY6 352 aa4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 KLHL32Q96NJ5 620 aa4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 TLR10Q9BXR5 811 aa4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 TBCCD1Q9NVR7 557 aa4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 FOXJ2Q9P0K8 574 aa4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 ZNHIT2Q9UHR6 403 aa4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 ABCC2Q92887 1545 aa4.31□□□□□ -1.72
HMGB3P12-201ENST00000438745 PCSK5Q92824 1860 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 PRAMEF33A0A0G2JMD5 474 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 F2RL2O00254 374 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 KIAA0355O15063 1070 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 PRAMEF10O60809 474 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 NUDT3O95989 172 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 ANXA1P04083 346 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 POU2F2P09086 479 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 CT47B1P0C2W7 299 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 SRGNP10124 158 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 KCNA2P16389 499 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 PDCP20941 246 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 MALP21145 153 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 POU6F2P78424 691 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 LRRC41Q15345 812 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 KHDC1Q4VXA5 237 aaKnown RBP4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 TMEM240Q5SV17 173 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 ZNF365Q70YC5 407 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 PDSS2Q86YH6 399 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 PTCD3Q96EY7 689 aaKnown RBP4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 BBC3Q96PG8 261 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 CRAMP1Q96RY5 1269 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 RIOX1Q9H6W3 641 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 METTL14Q9HCE5 456 aaKnown RBP4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 MAN1C1Q9NR34 630 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 ZIM2Q9NZV7 527 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 TCEAL9Q9UHQ7 104 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 NOB1Q9ULX3 412 aaKnown RBP4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 MTO1Q9Y2Z2 717 aaKnown RBP4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 NEU2Q9Y3R4 380 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 EID1Q9Y6B2 187 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 COX11Q9Y6N1 276 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 MAP3K4Q9Y6R4 1608 aa4.3□□□□□ -1.72
HMGB3P12-201ENST00000438745 FHAD1B1AJZ9 1412 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 PTPRGP23470 1445 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 BCORL1Q5H9F3 1711 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 ADAMTS12P58397 1594 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 E7ENX8 843 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 PROM1O43490 865 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 AKAP10O43572 662 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 MARCH6O60337 910 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 SUN1O94901 812 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 PARNO95453 639 aaKnown RBP4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 CD1AP06126 327 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 GATA3P23771 443 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 CYP2C19P33261 490 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 SIM1P81133 766 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 TAP2Q03519 686 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 DYRK1AQ13627 763 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 GEN1Q17RS7 908 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 ZNF362Q5T0B9 420 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 FMNL3Q8IVF7 1028 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 CFAP52Q8N1V2 620 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 CPA6Q8N4T0 437 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 TSR2Q969E8 191 aaKnown RBP4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 VRK1Q99986 396 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 KCTD5Q9NXV2 234 aa4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 RGS17Q9UGC6 210 aaPredicted RBP4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 TESQ9UGI8 421 aaKnown RBP4.29□□□□□ -1.72
HMGB3P12-201ENST00000438745 ZNF180Q9UJW8 692 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms