RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 TNNI1P19237 187 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 GPC1P35052 558 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 MXI1P50539 228 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 FXR1P51114 621 aaKnown RBP eCLIP7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 FAM189BP81408 668 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 DAB2P98082 770 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 CBLBQ13191 982 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 SURF1Q15526 300 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 ZBTB6Q15916 424 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 HIF1AQ16665 826 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 EXOC3L4Q17RC7 722 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 ZACNQ401N2 412 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 SH3PXD2AQ5TCZ1 1133 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 TDRD10Q5VZ19 366 aaKnown RBP7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 KRT39Q6A163 491 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 JADE1Q6IE81 842 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 TRIM65Q6PJ69 517 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 GBP6Q6ZN66 633 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 CCDC186Q7Z3E2 898 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 USP37Q86T82 979 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 WDR49Q8IV35 697 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 CD302Q8IX05 232 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 ETFBKMTQ8IXQ9 262 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 TMEM130Q8N3G9 435 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 DBF4BQ8NFT6 615 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 SNIP1Q8TAD8 396 aaKnown RBP7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 CXorf38Q8TB03 319 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 TAS1R2Q8TE23 839 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 RHBDD1Q8TEB9 315 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 CPLX3Q8WVH0 158 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 LINC01599Q8WXQ3 324 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 SNX27Q96L92 541 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 ZMAT2Q96NC0 199 aaKnown RBP7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 APOL6Q9BWW8 343 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 LSM14BQ9BX40 385 aaKnown RBP7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 KLF16Q9BXK1 252 aaPredicted RBP7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 TRIM6Q9C030 488 aaPredicted RBP7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 PHACTR1Q9C0D0 580 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 TTYH3Q9C0H2 523 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 INTS2Q9H0H0 1204 aaKnown RBP7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 ASB7Q9H672 318 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 FAM207AQ9NSI2 230 aaPredicted RBP7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 KLK14Q9P0G3 267 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 HCN4Q9Y3Q4 1203 aa7.59□□□□□ -1.19
LSM3P3-201ENST00000436601 CEP350Q5VT06 3117 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 SMIM28A0A1B0GU29 152 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 C9IYK1 514 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 MEN1O00255 615 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 ENPP3O14638 875 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 PARNO95453 639 aaKnown RBP7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 TIMP1P01033 207 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 CST3P01034 146 aaPredicted RBP7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 PDGFAP04085 211 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 RPLP1P05386 114 aaKnown RBP7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 ITGA4P13612 1032 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 KCNE1P15382 129 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 CASP14P31944 242 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 RAB27AP51159 221 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 AFF1P51825 1210 aaKnown RBP7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 AP3M2P53677 418 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 YARSP54577 528 aaKnown RBP7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 TFAMQ00059 246 aaKnown RBP7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 GOLGA8FQ08AF8 430 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 GOLGA8DPQ0D2H9 430 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 DUOXA2Q1HG44 320 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 FIGNQ5HY92 759 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 COL13A1Q5TAT6 717 aaPredicted RBP7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 KLHDC7AQ5VTJ3 777 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 GJB7Q6PEY0 223 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 AGMOQ6ZNB7 445 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 SLC24A5Q71RS6 500 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 TRAPPC11Q7Z392 1133 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 ZNF598Q86UK7 904 aaKnown RBP7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 ATCAYQ86WG3 371 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 ECHDC2Q86YB7 292 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 GSTCDQ8NEC7 633 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 FBXL13Q8NEE6 735 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 FBF1Q8TES7 1133 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 SREK1Q8WXA9 508 aaKnown RBP7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 SEPT8Q92599 483 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 EDEM1Q92611 657 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 LPPQ93052 612 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 ELMO3Q96BJ8 720 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 ITPKCQ96DU7 683 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 NUP58Q9BVL2 599 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 MTMR12Q9C0I1 747 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 NIF3L1Q9GZT8 377 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 GANQ9H2C0 597 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 PLCB1Q9NQ66 1216 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 RNF19AQ9NV58 838 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 RAB20Q9NX57 234 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 GCNT4Q9P109 453 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 CNTN3Q9P232 1028 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 AJAP1Q9UKB5 411 aaPredicted RBP7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 CAPN11Q9UMQ6 739 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 DERAQ9Y315 318 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 C2CD2Q9Y426 696 aa7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.58□□□□□ -1.2
LSM3P3-201ENST00000436601 PCNTO95613 3336 aa7.57□□□□□ -1.2
LSM3P3-201ENST00000436601 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms