RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 KIF4AO95239 1232 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 POMCP01189 267 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 HOXA11P31270 313 aaPredicted RBP9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 RPS9P46781 194 aaKnown RBP9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 GPC5P78333 572 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 ATP11AP98196 1134 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 CSTF1Q05048 431 aaKnown RBP9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 DSC1Q08554 894 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 NECTIN1Q15223 517 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 MLF2Q15773 248 aaPredicted RBP9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 ST3GAL2Q16842 350 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 USP41Q3LFD5 358 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 SLC44A4Q53GD3 710 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 ZBTB41Q5SVQ8 909 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 LRCH2Q5VUJ6 765 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 LILRA6Q6PI73 481 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 TAS1R1Q7RTX1 841 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 MIER3Q7Z3K6 550 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 ATCAYQ86WG3 371 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 COLEC11Q9BWP8 271 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 LSG1Q9H089 658 aaKnown RBP9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 UNC45AQ9H3U1 944 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 MARCH5Q9NX47 278 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 CDH7Q9ULB5 785 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 PRG3Q9Y2Y8 225 aaPredicted RBP9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 COL4A3BPQ9Y5P4 624 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 MYH15Q9Y2K3 1946 aa9.37□□□□□ -0.91
NIF3L1-208ENST00000436412 DSPP15924 2871 aaKnown RBP9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 ARL5CA6NH57 179 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 FAM170BA6NMN3 283 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 CHMP2AO43633 222 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 PSMD10O75832 226 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 STBD1O95210 358 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 ADRB1P08588 477 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 HNRNPA1P09651 372 aaKnown RBP eCLIP9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 SPATA31D3P0C874 917 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 ITGA4P13612 1032 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 OR1G1P47890 313 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 EXOSC10Q01780 885 aaKnown RBP9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 SNW1Q13573 536 aaKnown RBP9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 UBXN2BQ14CS0 331 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 SPATA31D4Q6ZUB0 917 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 PALB2Q86YC2 1186 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 SLC7A3Q8WY07 619 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 FGF14Q92915 247 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 CLDN23Q96B33 292 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 CCDC51Q96ER9 411 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 CCDC136Q96JN2 1154 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 NLRP4Q96MN2 994 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 MBOAT7Q96N66 472 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 RBSNQ9H1K0 784 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 LTB4R2Q9NPC1 389 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 GMEB2Q9UKD1 530 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 BRPF3Q9ULD4 1205 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 USP18Q9UMW8 372 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 FNDC3AQ9Y2H6 1198 aaKnown RBP9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 MRPS17Q9Y2R5 130 aaKnown RBP9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 GTF3C3Q9Y5Q9 886 aa9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 FLNBO75369 2602 aaKnown RBP9.36□□□□□ -0.91
NIF3L1-208ENST00000436412 ASAP2O43150 1006 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 DKC1O60832 514 aaKnown RBP eCLIP9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 LRP3O75074 770 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 LRRN2O75325 713 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 POU2F2P09086 479 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 TGM1P22735 817 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 CDC27P30260 824 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 AXLP30530 894 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 HOXA9P31269 272 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 PSMC5P62195 406 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 NCBP1Q09161 790 aaKnown RBP9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 HYAL2Q12891 473 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 Q4G0T1 1027 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 UBXN11Q5T124 520 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 RALGAPA1Q6GYQ0 2036 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 PARM1Q6UWI2 310 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 B3GNT9Q6UX72 402 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 KSR1Q8IVT5 923 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 SMG8Q8ND04 991 aaKnown RBP9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 CCDC148Q8NFR7 591 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 NETO1Q8TDF5 533 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 PSPC1Q8WXF1 523 aaKnown RBP9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 RPP25Q9BUL9 199 aaKnown RBP9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 C22orf23Q9BZE7 217 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 PRMT8Q9NR22 394 aaPredicted RBP9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 ABI2Q9NYB9 513 aaPredicted RBP9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 TMEM63CQ9P1W3 806 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 PATJQ8NI35 1801 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 ZMYM2Q9UBW7 1377 aa9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 TDRD15B5MCY1 1934 aaKnown RBP9.35□□□□□ -0.91
NIF3L1-208ENST00000436412 ASPMQ8IZT6 3477 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 SPAG17Q6Q759 2223 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 CYP3A7-CYP3A51PA0A087WV96 503 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 KLF18A0A0U1RQI7 1052 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 SLC30A4O14863 429 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 PRPF3O43395 683 aaKnown RBP9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 FOXD2O60548 495 aaPredicted RBP9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 ALX3O95076 343 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 HMGB1P09429 215 aaKnown RBP9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 SRGAP2CP0DJJ0 459 aa9.34□□□□□ -0.91
NIF3L1-208ENST00000436412 MYBP10242 640 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms