RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 TRIM28Q13263 835 aaKnown RBP23.5■■□□□ 1.35
TOP2B-204ENST00000435706 SBK1Q52WX2 424 aa23.5■■□□□ 1.35
TOP2B-204ENST00000435706 MROH9Q5TGP6 573 aa23.5■■□□□ 1.35
TOP2B-204ENST00000435706 MAD2L2Q9UI95 211 aa23.5■■□□□ 1.35
TOP2B-204ENST00000435706 AP4S1Q9Y587 144 aa23.5■■□□□ 1.35
TOP2B-204ENST00000435706 E2F8A0AVK6 867 aa23.5■■□□□ 1.35
TOP2B-204ENST00000435706 P4HA2O15460 535 aa23.5■■□□□ 1.35
TOP2B-204ENST00000435706 STXBP2Q15833 593 aa23.5■■□□□ 1.35
TOP2B-204ENST00000435706 VCAM1P19320 739 aa23.5■■□□□ 1.35
TOP2B-204ENST00000435706 PON1P27169 355 aa23.5■■□□□ 1.35
TOP2B-204ENST00000435706 ZNF786Q8N393 782 aa23.5■■□□□ 1.35
TOP2B-204ENST00000435706 PARD3BQ8TEW8 1205 aa23.5■■□□□ 1.35
TOP2B-204ENST00000435706 TOPORSQ9NS56 1045 aaPredicted RBP23.5■■□□□ 1.35
TOP2B-204ENST00000435706 KCND2Q9NZV8 630 aa23.5■■□□□ 1.35
TOP2B-204ENST00000435706 KIAA0391O15091 583 aaKnown RBP23.49■■□□□ 1.35
TOP2B-204ENST00000435706 CLPTM1O96005 669 aa23.49■■□□□ 1.35
TOP2B-204ENST00000435706 PDGFRAP16234 1089 aa23.49■■□□□ 1.35
TOP2B-204ENST00000435706 CIITAP33076 1130 aa23.49■■□□□ 1.35
TOP2B-204ENST00000435706 RC3H1Q5TC82 1133 aaKnown RBP23.49■■□□□ 1.35
TOP2B-204ENST00000435706 ATG4AQ8WYN0 398 aa23.49■■□□□ 1.35
TOP2B-204ENST00000435706 KLHL4Q9C0H6 718 aa23.49■■□□□ 1.35
TOP2B-204ENST00000435706 GFAPP14136 432 aa23.49■■□□□ 1.35
TOP2B-204ENST00000435706 CDH2P19022 906 aaPredicted RBP23.49■■□□□ 1.35
TOP2B-204ENST00000435706 TRIM60Q495X7 471 aa23.49■■□□□ 1.35
TOP2B-204ENST00000435706 AGAP3Q96P47 875 aa23.49■■□□□ 1.35
TOP2B-204ENST00000435706 UBA6A0AVT1 1052 aaPredicted RBP23.49■■□□□ 1.35
TOP2B-204ENST00000435706 ZSCAN5CA6NGD5 496 aaPredicted RBP23.49■■□□□ 1.35
TOP2B-204ENST00000435706 UBE2Q2LH0YL09 131 aa23.49■■□□□ 1.35
TOP2B-204ENST00000435706 FAM153BP0C7A2 387 aa23.49■■□□□ 1.35
TOP2B-204ENST00000435706 ZNF844Q08AG5 666 aa23.49■■□□□ 1.35
TOP2B-204ENST00000435706 CCDC15Q0P6D6 951 aa23.49■■□□□ 1.35
TOP2B-204ENST00000435706 FAM153CQ494X1 144 aa23.49■■□□□ 1.35
TOP2B-204ENST00000435706 BEST2Q8NFU1 509 aa23.49■■□□□ 1.35
TOP2B-204ENST00000435706 CNDP1Q96KN2 507 aa23.49■■□□□ 1.35
TOP2B-204ENST00000435706 EHD4Q9H223 541 aa23.49■■□□□ 1.35
TOP2B-204ENST00000435706 FAM153AQ9UHL3 310 aa23.49■■□□□ 1.35
TOP2B-204ENST00000435706 RBP3P10745 1247 aa23.49■■□□□ 1.35
TOP2B-204ENST00000435706 ARPP19P56211 112 aa23.49■■□□□ 1.35
TOP2B-204ENST00000435706 UGP2Q16851 508 aa23.49■■□□□ 1.35
TOP2B-204ENST00000435706 EGFL8Q99944 293 aa23.49■■□□□ 1.35
TOP2B-204ENST00000435706 CCNA1P78396 465 aa23.48■■□□□ 1.35
TOP2B-204ENST00000435706 NFX1Q12986 1120 aaKnown RBP23.48■■□□□ 1.35
TOP2B-204ENST00000435706 DMC1Q14565 340 aa23.48■■□□□ 1.35
TOP2B-204ENST00000435706 PPHLN1Q8NEY8 458 aaKnown RBP23.48■■□□□ 1.35
TOP2B-204ENST00000435706 NSUN6Q8TEA1 469 aaKnown RBP23.48■■□□□ 1.35
TOP2B-204ENST00000435706 USP21Q9UK80 565 aa23.48■■□□□ 1.35
TOP2B-204ENST00000435706 PODNQ7Z5L7 613 aa23.48■■□□□ 1.35
TOP2B-204ENST00000435706 INPP5DQ92835 1189 aa23.48■■□□□ 1.35
TOP2B-204ENST00000435706 PSMC3P17980 439 aa23.48■■□□□ 1.35
TOP2B-204ENST00000435706 ZNF543Q08ER8 600 aa23.48■■□□□ 1.35
TOP2B-204ENST00000435706 ARAP3Q8WWN8 1544 aa23.48■■□□□ 1.35
TOP2B-204ENST00000435706 TMEM120AQ9BXJ8 343 aa23.48■■□□□ 1.35
TOP2B-204ENST00000435706 TAGLN3Q9UI15 199 aa23.48■■□□□ 1.35
TOP2B-204ENST00000435706 LRCH1Q9Y2L9 728 aa23.48■■□□□ 1.35
TOP2B-204ENST00000435706 PDAP1Q13442 181 aaKnown RBP23.47■■□□□ 1.35
TOP2B-204ENST00000435706 TEX12Q9BXU0 123 aa23.47■■□□□ 1.35
TOP2B-204ENST00000435706 F8W8V4 182 aa23.47■■□□□ 1.35
TOP2B-204ENST00000435706 ARHGAP22Q7Z5H3 698 aa23.47■■□□□ 1.35
TOP2B-204ENST00000435706 FAM71DQ8N9W8 422 aa23.47■■□□□ 1.35
TOP2B-204ENST00000435706 PAWRQ96IZ0 340 aaKnown RBP23.47■■□□□ 1.35
TOP2B-204ENST00000435706 RSAD1Q9HA92 442 aa23.47■■□□□ 1.35
TOP2B-204ENST00000435706 CNOT7Q9UIV1 285 aaKnown RBP23.47■■□□□ 1.35
TOP2B-204ENST00000435706 FKBP6O75344 327 aa23.47■■□□□ 1.35
TOP2B-204ENST00000435706 RFX5P48382 616 aaPredicted RBP23.47■■□□□ 1.35
TOP2B-204ENST00000435706 ZNF677Q86XU0 584 aa23.47■■□□□ 1.35
TOP2B-204ENST00000435706 AP3B1O00203 1094 aa23.47■■□□□ 1.35
TOP2B-204ENST00000435706 TFRCP02786 760 aaKnown RBP23.47■■□□□ 1.35
TOP2B-204ENST00000435706 EAPPQ56P03 285 aaPredicted RBP23.47■■□□□ 1.35
TOP2B-204ENST00000435706 ATXN2LQ8WWM7 1075 aaKnown RBP23.47■■□□□ 1.35
TOP2B-204ENST00000435706 FAM49AQ9H0Q0 323 aaPredicted RBP23.47■■□□□ 1.35
TOP2B-204ENST00000435706 TMEM8AQ9HCN3 771 aa23.47■■□□□ 1.35
TOP2B-204ENST00000435706 AXIN2Q9Y2T1 843 aa23.47■■□□□ 1.35
TOP2B-204ENST00000435706 VCPP55072 806 aaKnown RBP23.46■■□□□ 1.35
TOP2B-204ENST00000435706 ELF3P78545 371 aaPredicted RBP23.46■■□□□ 1.35
TOP2B-204ENST00000435706 FEZF2Q8TBJ5 459 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 MTMR4Q9NYA4 1195 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 PCDHA10Q9Y5I2 948 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 OVOS2A0A0G2JMS6 1433 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 ZBTB39O15060 712 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 RASA2Q15283 850 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 PREPLQ4J6C6 727 aaPredicted RBP23.46■■□□□ 1.35
TOP2B-204ENST00000435706 LAYNQ6UX15 382 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 ATP8B4Q8TF62 1192 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 MTMR8Q96EF0 704 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 SEMA4AQ9H3S1 761 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 A8MXQ7 604 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 RAP1GDS1P52306 607 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 SNX30Q5VWJ9 437 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 ABI1Q8IZP0 508 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 SEMA6BQ9H3T3 888 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 ACOT2P49753 483 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 WDR72Q3MJ13 1102 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 EPC2Q52LR7 807 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 TMC3Q7Z5M5 1100 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 VPS33BQ9H267 617 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 A0A0A6YYK5 440 aaPredicted RBP23.46■■□□□ 1.35
TOP2B-204ENST00000435706 TRAPPC3O43617 180 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 TMCC1O94876 653 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 ACAD10Q6JQN1 1059 aa23.46■■□□□ 1.35
TOP2B-204ENST00000435706 B4GALNT2Q8NHY0 566 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms