RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 FAM71AQ8IYT1 594 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 ACER1Q8TDN7 264 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 TTC17Q96AE7 1141 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 RILPQ96NA2 401 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 CTDP1Q9Y5B0 961 aaPredicted RBP11.05□□□□□ -0.64
SCAF4-203ENST00000434667 E5RJQ4 531 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 GRIN3BO60391 1043 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 PFDN1O60925 122 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 FAM155BO75949 473 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 WNT7BP56706 349 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 DGKZQ13574 1117 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 ZNF394Q53GI3 561 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 RC3H1Q5TC82 1133 aaKnown RBP11.05□□□□□ -0.64
SCAF4-203ENST00000434667 C4orf50Q6ZRC1 276 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 FAM196AQ6ZSG2 479 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 CTAGE3PQ8IX95 158 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 ANKRD35Q8N283 1001 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 PDCD7Q8N8D1 485 aaKnown RBP11.05□□□□□ -0.64
SCAF4-203ENST00000434667 TCP10LQ8TDR4 215 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 DDX27Q96GQ7 796 aaKnown RBP11.05□□□□□ -0.64
SCAF4-203ENST00000434667 ZNF333Q96JL9 665 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 MBOAT7Q96N66 472 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 ADGRA3Q8IWK6 1321 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 FAM237BA0A1B0GVD1 139 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 MAP3K6O95382 1288 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 HSPA6P17066 643 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 BRD2P25440 801 aaKnown RBP11.05□□□□□ -0.64
SCAF4-203ENST00000434667 ADSSP30520 456 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 DSG3P32926 999 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 CETN2P41208 172 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 YARSP54577 528 aaKnown RBP11.05□□□□□ -0.64
SCAF4-203ENST00000434667 PTK6Q13882 451 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 SMTNL2Q2TAL5 461 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 TMEM130Q8N3G9 435 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 ATL2Q8NHH9 583 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 IL31RAQ8NI17 732 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 DENND1AQ8TEH3 1009 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 WDR11Q9BZH6 1224 aa11.05□□□□□ -0.64
SCAF4-203ENST00000434667 TCRBV7S3A2A0A539 114 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 MEI4A8MW99 385 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 GYG2O15488 501 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 PSMD10O75832 226 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 CYP1A2P05177 515 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 GAP43P17677 238 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 ANXA13P27216 316 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 MARK3P27448 753 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 ATP5DP30049 168 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 CACNA2D1P54289 1103 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 KDSRQ06136 332 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 CETN1Q12798 172 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 FAM102BQ5T8I3 360 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 APOBEC3HQ6NTF7 200 aaKnown RBP11.04□□□□□ -0.64
SCAF4-203ENST00000434667 TRIM56Q9BRZ2 755 aaKnown RBP11.04□□□□□ -0.64
SCAF4-203ENST00000434667 OSBPL8Q9BZF1 889 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.04□□□□□ -0.64
SCAF4-203ENST00000434667 GAKO14976 1311 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 LUC7L3O95232 432 aaKnown RBP11.04□□□□□ -0.64
SCAF4-203ENST00000434667 TOP3BO95985 862 aaKnown RBP11.04□□□□□ -0.64
SCAF4-203ENST00000434667 CYP1A1P04798 512 aaPredicted RBP11.04□□□□□ -0.64
SCAF4-203ENST00000434667 SPP2Q13103 211 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 UGCGQ16739 394 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 KCNT1Q5JUK3 1230 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 CWF19L1Q69YN2 538 aaKnown RBP11.04□□□□□ -0.64
SCAF4-203ENST00000434667 PPP1R21Q6ZMI0 780 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 AGGF1Q8N302 714 aaeCLIP11.04□□□□□ -0.64
SCAF4-203ENST00000434667 HELQQ8TDG4 1101 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 FAM20AQ96MK3 541 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 POLR3CQ9BUI4 534 aaPredicted RBP11.04□□□□□ -0.64
SCAF4-203ENST00000434667 PRR12Q9ULL5 1215 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 KLRG2A4D1S0 409 aaPredicted RBP11.04□□□□□ -0.64
SCAF4-203ENST00000434667 EIF3DO15371 548 aaKnown RBP eCLIP11.04□□□□□ -0.64
SCAF4-203ENST00000434667 BGNP21810 368 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 HSPA1LP34931 641 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 GCLCP48506 637 aaPredicted RBP11.04□□□□□ -0.64
SCAF4-203ENST00000434667 GDF10P55107 478 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 CTC1Q2NKJ3 1217 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 OR52E8Q6IFG1 317 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 HAUS6Q7Z4H7 955 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 XXYLT1Q8NBI6 393 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 DDX1Q92499 740 aaKnown RBP11.04□□□□□ -0.64
SCAF4-203ENST00000434667 FAM161BQ96MY7 647 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 PACSIN3Q9UKS6 424 aa11.04□□□□□ -0.64
SCAF4-203ENST00000434667 RPS6KA4O75676 772 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 HLA-DOAP06340 250 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 ENO1P06733 434 aaKnown RBP11.03□□□□□ -0.64
SCAF4-203ENST00000434667 IL1R1P14778 569 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 RASSF2P50749 326 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 COG7P83436 770 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 PPP2R5DQ14738 602 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 SNRNP35Q16560 246 aaKnown RBP11.03□□□□□ -0.64
SCAF4-203ENST00000434667 ACAD10Q6JQN1 1059 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 MFSD7Q6UXD7 560 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.03□□□□□ -0.645e-6■■■■■ 29.2
SCAF4-203ENST00000434667 TMX4Q9H1E5 349 aaPredicted RBP11.03□□□□□ -0.64
SCAF4-203ENST00000434667 EURLQ9NYK6 297 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 STARD13Q9Y3M8 1113 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 ZNFX1Q9P2E3 1918 aaKnown RBP11.03□□□□□ -0.64
SCAF4-203ENST00000434667 PRELPP51888 382 aa11.03□□□□□ -0.64
SCAF4-203ENST00000434667 ATXN3P54252 364 aaPredicted RBP11.03□□□□□ -0.64
SCAF4-203ENST00000434667 GPX6P59796 221 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms