RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 TMBIM4Q9HC24 238 aa16.5■□□□□ 0.23
SCARF1-203ENST00000434376 INTUQ9ULD6 942 aa16.5■□□□□ 0.23
SCARF1-203ENST00000434376 C4BPAP04003 597 aaKnown RBP16.5■□□□□ 0.23
SCARF1-203ENST00000434376 HSPA9P38646 679 aaKnown RBP16.5■□□□□ 0.23
SCARF1-203ENST00000434376 PEX5P50542 639 aa16.5■□□□□ 0.23
SCARF1-203ENST00000434376 ITGA8P53708 1063 aa16.5■□□□□ 0.23
SCARF1-203ENST00000434376 RUFY4Q6ZNE9 571 aa16.5■□□□□ 0.23
SCARF1-203ENST00000434376 ZNF572Q7Z3I7 529 aaPredicted RBP16.5■□□□□ 0.23
SCARF1-203ENST00000434376 FUKQ8N0W3 1084 aa16.5■□□□□ 0.23
SCARF1-203ENST00000434376 CALR3Q96L12 384 aaKnown RBP16.5■□□□□ 0.23
SCARF1-203ENST00000434376 NFICP08651 508 aa16.5■□□□□ 0.23
SCARF1-203ENST00000434376 GCLCP48506 637 aaPredicted RBP16.5■□□□□ 0.23
SCARF1-203ENST00000434376 NUMBP49757 651 aa16.5■□□□□ 0.23
SCARF1-203ENST00000434376 PPP2R2AP63151 447 aa16.5■□□□□ 0.23
SCARF1-203ENST00000434376 MYO1EQ12965 1108 aa16.5■□□□□ 0.23
SCARF1-203ENST00000434376 KLK14Q9P0G3 267 aa16.5■□□□□ 0.23
SCARF1-203ENST00000434376 HCRTO43612 131 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 ADCY3O60266 1144 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 INSRRP14616 1297 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 SCTRP47872 440 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 RAB6CQ53S08 254 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 DPP9Q86TI2 863 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 GPC2Q8N158 579 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 C12orf29Q8N999 325 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 TMEM121Q9BTD3 319 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 RAB6CQ9H0N0 254 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 DHX33Q9H6R0 707 aaKnown RBP16.49■□□□□ 0.23
SCARF1-203ENST00000434376 DONSONQ9NYP3 566 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 NENFQ9UMX5 172 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 MYPNQ86TC9 1320 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 PASKQ96RG2 1323 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 MIF4GDA9UHW6 222 aaKnown RBP16.49■□□□□ 0.23
SCARF1-203ENST00000434376 SGK1O00141 431 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 GRIN3BO60391 1043 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 ATF2P15336 505 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 TAF5Q15542 800 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 MFSD7Q6UXD7 560 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 ZC3H18Q86VM9 953 aaKnown RBP16.49■□□□□ 0.23
SCARF1-203ENST00000434376 ERICH1Q86X53 443 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 RASGEF1CQ8N431 466 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 SLC10A4Q96EP9 437 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 HEXIM2Q96MH2 286 aaKnown RBP16.49■□□□□ 0.23
SCARF1-203ENST00000434376 ELAC2Q9BQ52 826 aaKnown RBP16.49■□□□□ 0.23
SCARF1-203ENST00000434376 MRPL4Q9BYD3 311 aaKnown RBP16.49■□□□□ 0.23
SCARF1-203ENST00000434376 CXCL16Q9H2A7 254 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 RBPJLQ9UBG7 517 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 CACNG4Q9UBN1 327 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 STK38LQ9Y2H1 464 aa16.49■□□□□ 0.23
SCARF1-203ENST00000434376 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.49■□□□□ 0.23
SCARF1-203ENST00000434376 MAFGO15525 162 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 IQCF3P0C7M6 154 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 NAMPTP43490 491 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 ATF7IP2Q5U623 682 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 DUPD1Q68J44 220 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 OSBPL8Q9BZF1 889 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 MIS12Q9H081 205 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 WNT8AQ9H1J5 351 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 SMYD3Q9H7B4 428 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 GPATCH2LQ9NWQ4 482 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 ANAPC5Q9UJX4 755 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 L3MBTL1Q9Y468 752 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 MYH9P35579 1960 aaKnown RBP16.48■□□□□ 0.23
SCARF1-203ENST00000434376 SPAG7O75391 227 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 GARTP22102 1010 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 GPR162Q16538 588 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 ZDHHC24Q6UX98 284 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 KLF6Q99612 283 aaPredicted RBP16.48■□□□□ 0.23
SCARF1-203ENST00000434376 MAGED2Q9UNF1 606 aaPredicted RBP16.48■□□□□ 0.23
SCARF1-203ENST00000434376 A0A0B4J269 797 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.48■□□□□ 0.23
SCARF1-203ENST00000434376 BTNL10A8MVZ5 291 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 CHN1P15882 459 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 DUOXA2Q1HG44 320 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 ANKRD20A8PQ5CZ79 823 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 DENND1BQ6P3S1 775 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 SRRM1Q8IYB3 904 aaKnown RBP16.48■□□□□ 0.23
SCARF1-203ENST00000434376 TMC2Q8TDI7 906 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 VPS37BQ9H9H4 285 aa16.48■□□□□ 0.23
SCARF1-203ENST00000434376 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.48■□□□□ 0.23
SCARF1-203ENST00000434376 RASGRF2O14827 1237 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 P4HA2O15460 535 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 GZMAP12544 262 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 CHRNA3P32297 505 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 MAMLD1Q13495 774 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 PSMD6Q15008 389 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 ACCSLQ4AC99 568 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 SH3PXD2AQ5TCZ1 1133 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.47■□□□□ 0.23
SCARF1-203ENST00000434376 SGSM3Q96HU1 749 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 PRMT1Q99873 361 aaKnown RBP16.47■□□□□ 0.23
SCARF1-203ENST00000434376 NTPCRQ9BSD7 190 aaKnown RBP16.47■□□□□ 0.23
SCARF1-203ENST00000434376 CDC42EP4Q9H3Q1 356 aaKnown RBP16.47■□□□□ 0.23
SCARF1-203ENST00000434376 DNPEPQ9ULA0 475 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 PCDHA3Q9Y5H8 950 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 MAFBQ9Y5Q3 323 aaPredicted RBP16.47■□□□□ 0.23
SCARF1-203ENST00000434376 WDR91A4D1P6 747 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 ZBTB48P10074 688 aaPredicted RBP16.47■□□□□ 0.23
SCARF1-203ENST00000434376 YY1P25490 414 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 PSMA2P25787 234 aa16.47■□□□□ 0.23
SCARF1-203ENST00000434376 RABGGTBP53611 331 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms