RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 ADAM2Q99965 735 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 SDCBP2Q9H190 292 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 SLC38A7Q9NVC3 462 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 A0A0U1RQF3 1178 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 FAM170AA1A519 330 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 MEIS3P2A8K0S8 358 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 PIRO00625 290 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 CILPO75339 1184 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 CYP1A1P04798 512 aaPredicted RBP11.28□□□□□ -0.6
NEFM-202ENST00000433454 PAEPP09466 180 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 UNGP13051 313 aaPredicted RBP11.28□□□□□ -0.6
NEFM-202ENST00000433454 SELPP16109 830 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 BRD2P25440 801 aaKnown RBP11.28□□□□□ -0.6
NEFM-202ENST00000433454 NSFP46459 744 aaKnown RBP11.28□□□□□ -0.6
NEFM-202ENST00000433454 CENPCQ03188 943 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 INCA1Q0VD86 236 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 BFSP2Q13515 415 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 LRRC8DQ7L1W4 858 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 SLC35G2Q8TBE7 412 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 ZNF606Q8WXB4 792 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 ARHGEF26Q96DR7 871 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 GAD1Q99259 594 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 CDC23Q9UJX2 597 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 SNX9Q9Y5X1 595 aa11.28□□□□□ -0.6
NEFM-202ENST00000433454 UQCRHLA0A096LP55 91 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 GRID2IPA4D2P6 1211 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 SLU7O95391 586 aaKnown RBP11.27□□□□□ -0.61
NEFM-202ENST00000433454 UQCRHP07919 91 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 AMPD2Q01433 879 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 SOX4Q06945 474 aaPredicted RBP11.27□□□□□ -0.61
NEFM-202ENST00000433454 MBTPS1Q14703 1052 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 NAA35Q5VZE5 725 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 PAPD7Q5XG87 772 aaKnown RBP11.27□□□□□ -0.61
NEFM-202ENST00000433454 CTU1Q7Z7A3 348 aaKnown RBP11.27□□□□□ -0.61
NEFM-202ENST00000433454 PASD1Q8IV76 773 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 TPCN2Q8NHX9 752 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 LPPQ93052 612 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 ZNF653Q96CK0 615 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 PGBD4Q96DM1 585 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 TRIM11Q96F44 468 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 CALR3Q96L12 384 aaKnown RBP11.27□□□□□ -0.61
NEFM-202ENST00000433454 GOLGA2P5Q9HBQ8 144 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 GTF3C4Q9UKN8 822 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 BARX2Q9UMQ3 279 aaPredicted RBP11.27□□□□□ -0.61
NEFM-202ENST00000433454 SAR1BQ9Y6B6 198 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 ARL5CA6NH57 179 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 MED7O43513 233 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 LSM8O95777 96 aaKnown RBP11.27□□□□□ -0.61
NEFM-202ENST00000433454 THP07101 528 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 LRPAP1P30533 357 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 TAF6P49848 677 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 RAD23BP54727 409 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 NOMO3P69849 1222 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 TCEAL1Q15170 157 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 SV2CQ496J9 727 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 AGMOQ6ZNB7 445 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 SYCE1Q8N0S2 351 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 RNF169Q8NCN4 708 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 CYFIP2Q96F07 1278 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 RSAD1Q9HA92 442 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 OSGEPQ9NPF4 335 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 CTTNBP2NLQ9P2B4 639 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 CEP83Q9Y592 693 aa11.27□□□□□ -0.61
NEFM-202ENST00000433454 PITPNM1O00562 1244 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 PQBP1O60828 265 aaKnown RBP11.26□□□□□ -0.61
NEFM-202ENST00000433454 MYBL1P10243 752 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 CD19P15391 556 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 GTF2F1P35269 517 aaKnown RBP eCLIP11.26□□□□□ -0.61
NEFM-202ENST00000433454 FBXO46Q6PJ61 603 aaPredicted RBP11.26□□□□□ -0.61
NEFM-202ENST00000433454 DNAJC5GQ8N7S2 189 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 LRRC57Q8N9N7 239 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 SLC4A11Q8NBS3 891 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 GSTCDQ8NEC7 633 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 WHAMMQ8TF30 809 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 CPA5Q8WXQ8 436 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 TMEM176AQ96HP8 235 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 ZNF333Q96JL9 665 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 UBN1Q9NPG3 1134 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 HMGXB4Q9UGU5 601 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 PCDHGC3Q9UN70 934 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 KPNA7A9QM74 516 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 FTCDO95954 541 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 CYP1A2P05177 515 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 CFHP08603 1231 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 NDST1P52848 882 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 HADHBP55084 474 aaKnown RBP11.26□□□□□ -0.61
NEFM-202ENST00000433454 WHAMMP3Q1A5X7 153 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 DAAM2Q86T65 1068 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 MCOLN2Q8IZK6 566 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 MNS1Q8NEH6 495 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 TFAP2BQ92481 460 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 TWNKQ96RR1 684 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 NT5C1AQ9BXI3 368 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 FTHL17Q9BXU8 183 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 ELOVL4Q9GZR5 314 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 CRISPLD2Q9H0B8 497 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 RGS18Q9NS28 235 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 GDAP2Q9NXN4 497 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 SNX12Q9UMY4 172 aa11.26□□□□□ -0.61
NEFM-202ENST00000433454 ATMINO43313 823 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms