RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 OGTO15294 1046 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 KDM1AO60341 852 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 TBC1D8O95759 1140 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 CPA1P15085 419 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 PRPSAP1Q14558 356 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 ANO4Q32M45 955 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 ZNF699Q32M78 642 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 BBS12Q6ZW61 710 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 SLFN11Q7Z7L1 901 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 SFR1Q86XK3 245 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 HELQQ8TDG4 1101 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 SMCR8Q8TEV9 937 aaPredicted RBP3.96□□□□□ -1.77
SHPRH-205ENST00000433355 CMTM5Q96DZ9 223 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 ZNF302Q9NR11 478 aa3.96□□□□□ -1.77
SHPRH-205ENST00000433355 TRMT1Q9NXH9 659 aaKnown RBP3.96□□□□□ -1.77
SHPRH-205ENST00000433355 POLRMTO00411 1230 aaKnown RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 ACKR2O00590 384 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 PFKLP17858 780 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 CAPZA2P47755 286 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 PTK6Q13882 451 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 MTX3Q5HYI7 312 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 NOTUMQ6P988 496 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 TMEM139Q8IV31 216 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 U2AF1L4Q8WU68 220 aaKnown RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 GJA10Q969M2 543 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 MRRFQ96E11 262 aaKnown RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 EIF2AK1Q9BQI3 630 aaKnown RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 SEC31BQ9NQW1 1179 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 TACC3Q9Y6A5 838 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 STYXL1Q9Y6J8 313 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 ATRXP46100 2492 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 HPDP32754 393 aaPredicted RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 MMP13P45452 471 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 SCNN1GP51170 649 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 RHBDL3P58872 404 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 LRRC74AQ0VAA2 488 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 STK4Q13043 487 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 CYP1B1Q16678 543 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 TFDP3Q5H9I0 405 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 EFHC1Q5JVL4 640 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 WDR75Q8IWA0 830 aaKnown RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 CRYGNQ8WXF5 182 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 ZNF622Q969S3 477 aaKnown RBP eCLIP3.96□□□□□ -1.785e-7■□□□□ 11.3
SHPRH-205ENST00000433355 HSFY1Q96LI6 401 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 UROC1Q96N76 676 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 CCDC85AQ96PX6 553 aaPredicted RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 LRRC37BQ96QE4 947 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 UBXN6Q9BZV1 441 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 VPS16Q9H269 839 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 GANQ9H2C0 597 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 CCDC68Q9H2F9 335 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.96□□□□□ -1.785e-9■■■■■ 51.3
SHPRH-205ENST00000433355 GDF3Q9NR23 364 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 SIK3Q9Y2K2 1263 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 CHADO15335 359 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 FAM155BO75949 473 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 C7P10643 843 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 TAC1P20366 129 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 HCAR3P49019 387 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 CORO7P57737 925 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 FAM187BQ17R55 369 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 INSCQ1MX18 579 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 SCARA3Q6AZY7 606 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 LDHDQ86WU2 507 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 IFNLR1Q8IU57 520 aaPredicted RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 PPIL6Q8IXY8 311 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 PPM1KQ8N3J5 372 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 ACRBPQ8NEB7 543 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 BCAS4Q8TDM0 211 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 ZFP91Q96JP5 570 aaPredicted RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 KCNF1Q9H3M0 494 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 TLR3O15455 904 aaKnown RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 C1RP00736 705 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 CHRNA5P30532 468 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 BCAT1P54687 386 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 POLR2FP61218 127 aaKnown RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 SATB1Q01826 763 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 PTPN11Q06124 597 aaPredicted RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 PICALMQ13492 652 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 NPY5RQ15761 445 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 EPM2AIP1Q7L775 607 aaPredicted RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 MYO1HQ8N1T3 1032 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 ZCCHC9Q8N567 271 aaKnown RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 BEST2Q8NFU1 509 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 TPCN2Q8NHX9 752 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 FKBP10Q96AY3 582 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 CEP170P1Q96L14 293 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 KIFC3Q9BVG8 833 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 RNF146Q9NTX7 359 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 PYCARDQ9ULZ3 195 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 FHOD1Q9Y613 1164 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 M0R3G1 203 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 B4GALT4O60513 344 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 SNAPC5O75971 98 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 MMEP08473 750 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 C6orf222P0C671 652 aaPredicted RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 EEF2P13639 858 aaKnown RBP3.96□□□□□ -1.78
SHPRH-205ENST00000433355 TECP42680 631 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 PTGER2P43116 358 aa3.96□□□□□ -1.78
SHPRH-205ENST00000433355 ADKP55263 362 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms