RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 C9orf57Q5W0N0 161 aa15.46■□□□□ 0.07
SMARCE1-205ENST00000431889 ADALQ6DHV7 355 aa15.46■□□□□ 0.07
SMARCE1-205ENST00000431889 ZNF852Q6ZMS4 543 aa15.46■□□□□ 0.07
SMARCE1-205ENST00000431889 SFR1Q86XK3 245 aa15.46■□□□□ 0.07
SMARCE1-205ENST00000431889 TMC8Q8IU68 726 aa15.46■□□□□ 0.07
SMARCE1-205ENST00000431889 NOC3LQ8WTT2 800 aaKnown RBP15.46■□□□□ 0.07
SMARCE1-205ENST00000431889 SMARCD2Q92925 531 aa15.46■□□□□ 0.07
SMARCE1-205ENST00000431889 RMDN1Q96DB5 314 aa15.46■□□□□ 0.07
SMARCE1-205ENST00000431889 AK8Q96MA6 479 aa15.46■□□□□ 0.07
SMARCE1-205ENST00000431889 SMG9Q9H0W8 520 aaKnown RBP15.46■□□□□ 0.07
SMARCE1-205ENST00000431889 AVENQ9NQS1 362 aaPredicted RBP15.46■□□□□ 0.07
SMARCE1-205ENST00000431889 CPSF3Q9UKF6 684 aaKnown RBP15.46■□□□□ 0.07
SMARCE1-205ENST00000431889 GVINP1Q7Z2Y8 2422 aa15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 MTMR11A4FU01 709 aa15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 OAZ2O95190 189 aa15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 ZNF131P52739 623 aa15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 TMEM132DQ14C87 1099 aa15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 SLC39A12Q504Y0 691 aa15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 SPATA1Q5VX52 437 aa15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 RTL10Q7L3V2 364 aa15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 BEST2Q8NFU1 509 aa15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 FAM200AQ8TCP9 573 aa15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 GIPC2Q8TF65 315 aa15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 LARP4BQ92615 738 aaKnown RBP15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 LRRC3BQ96PB8 259 aa15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 SEPT5Q99719 369 aaPredicted RBP15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 LRRC3Q9BY71 257 aa15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 UPF2Q9HAU5 1272 aaKnown RBP15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 RBM12Q9NTZ6 932 aaKnown RBP15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 SLC38A8A6NNN8 435 aa15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 H0YCG3 227 aa15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 KINO60870 393 aaKnown RBP15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 CCNE1P24864 410 aa15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 LONP1P36776 959 aaKnown RBP15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 AARSP49588 968 aaKnown RBP eCLIP15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 CYP4F8P98187 520 aa15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 CENPPQ6IPU0 288 aa15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 ZC3H14Q6PJT7 736 aaKnown RBP15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 PYM1Q9BRP8 204 aaKnown RBP15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 FGFBP2Q9BYJ0 223 aa15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 KCNG1Q9UIX4 513 aa15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 PIAS3Q9Y6X2 628 aa15.45■□□□□ 0.06
SMARCE1-205ENST00000431889 ZNF263O14978 683 aa15.44■□□□□ 0.06
SMARCE1-205ENST00000431889 PIGRP01833 764 aa15.44■□□□□ 0.06
SMARCE1-205ENST00000431889 ODC1P11926 461 aa15.44■□□□□ 0.06
SMARCE1-205ENST00000431889 PSMC3P17980 439 aa15.44■□□□□ 0.06
SMARCE1-205ENST00000431889 CYP3A5P20815 502 aa15.44■□□□□ 0.06
SMARCE1-205ENST00000431889 ALDH1A3P47895 512 aa15.44■□□□□ 0.06
SMARCE1-205ENST00000431889 EPHB3P54753 998 aa15.44■□□□□ 0.06
SMARCE1-205ENST00000431889 GTF2BQ00403 316 aa15.44■□□□□ 0.06
SMARCE1-205ENST00000431889 GPR17Q13304 367 aa15.44■□□□□ 0.06
SMARCE1-205ENST00000431889 MGAT5BQ3V5L5 792 aa15.44■□□□□ 0.06
SMARCE1-205ENST00000431889 GAREM2Q75VX8 874 aa15.44■□□□□ 0.06
SMARCE1-205ENST00000431889 DNAJB7Q7Z6W7 309 aaPredicted RBP15.44■□□□□ 0.06
SMARCE1-205ENST00000431889 MAP4K3Q8IVH8 894 aa15.44■□□□□ 0.06
SMARCE1-205ENST00000431889 EFCAB13Q8IY85 973 aa15.44■□□□□ 0.06
SMARCE1-205ENST00000431889 SUMF1Q8NBK3 374 aa15.44■□□□□ 0.06
SMARCE1-205ENST00000431889 POMGNT1Q8WZA1 660 aa15.44■□□□□ 0.06
SMARCE1-205ENST00000431889 FAM3CQ92520 227 aa15.44■□□□□ 0.06
SMARCE1-205ENST00000431889 SAAL1Q96ER3 474 aa15.44■□□□□ 0.06
SMARCE1-205ENST00000431889 ATXN3LQ9H3M9 355 aa15.44■□□□□ 0.06
SMARCE1-205ENST00000431889 LMAN1LQ9HAT1 526 aa15.44■□□□□ 0.06
SMARCE1-205ENST00000431889 AGO2Q9UKV8 859 aaKnown RBP15.44■□□□□ 0.06
SMARCE1-205ENST00000431889 GOLGA8IPA6NC78 632 aa15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 MYMKA6NI61 221 aa15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 GOLGA8JA6NMD2 632 aa15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 CYB561D2O14569 222 aa15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 GABRR2P28476 465 aa15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 DDIT3P35638 169 aa15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 GPR15P49685 360 aa15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 CASP5P51878 434 aa15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 PLD1Q13393 1074 aa15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 PTPAQ15257 358 aa15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 GPR158Q5T848 1215 aa15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 SDHAF4Q5VUM1 108 aa15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 WSCD1Q658N2 575 aa15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 ARMCX5Q6P1M9 558 aa15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 CRELD2Q6UXH1 353 aaPredicted RBP15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 BRAPQ7Z569 592 aa15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 LRRTM3Q86VH5 581 aa15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 KRI1Q8N9T8 703 aaKnown RBP15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 ATRIPQ8WXE1 791 aa15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 CLDN23Q96B33 292 aa15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 MKNK1Q9BUB5 465 aa15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 DPP3Q9NY33 737 aa15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 FBXO2Q9UK22 296 aaPredicted RBP15.43■□□□□ 0.06
SMARCE1-205ENST00000431889 OR6C75A6NL08 312 aa15.42■□□□□ 0.06
SMARCE1-205ENST00000431889 PIRO00625 290 aa15.42■□□□□ 0.06
SMARCE1-205ENST00000431889 XPOTO43592 962 aaKnown RBP15.42■□□□□ 0.06
SMARCE1-205ENST00000431889 ATF6P18850 670 aa15.42■□□□□ 0.06
SMARCE1-205ENST00000431889 ADSSP30520 456 aa15.42■□□□□ 0.06
SMARCE1-205ENST00000431889 MCM2P49736 904 aa15.42■□□□□ 0.06
SMARCE1-205ENST00000431889 EPHA5P54756 1037 aa15.42■□□□□ 0.06
SMARCE1-205ENST00000431889 CCDC142Q17RM4 750 aa15.42■□□□□ 0.06
SMARCE1-205ENST00000431889 WDR44Q5JSH3 913 aa15.42■□□□□ 0.06
SMARCE1-205ENST00000431889 ARID3BQ8IVW6 561 aaPredicted RBP15.42■□□□□ 0.06
SMARCE1-205ENST00000431889 YAF2Q8IY57 180 aa15.42■□□□□ 0.06
SMARCE1-205ENST00000431889 ZNF687Q8N1G0 1237 aa15.42■□□□□ 0.06
SMARCE1-205ENST00000431889 IRF7Q92985 503 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms