RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 LMF1Q96S06 567 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 NEU1Q99519 415 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 MPHOSPH9Q99550 1183 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 SLC38A3Q99624 504 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 ISCA1Q9BUE6 129 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 CHST8Q9H2A9 424 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 GSTO2Q9H4Y5 243 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 A1CFQ9NQ94 594 aaKnown RBP3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 SACM1LQ9NTJ5 587 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 MRPS18AQ9NVS2 196 aaKnown RBP3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 PLA2G3Q9NZ20 509 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 PPP4R1LQ9P1A2 415 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 LRCH1Q9Y2L9 728 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 SH3BP1Q9Y3L3 701 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 DUSP10Q9Y6W6 482 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 CDHR4A6H8M9 788 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 GOLGA6L3A6NEY3 463 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 DRGXA6NNA5 263 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 ZNF785A8K8V0 405 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 TMEM233B4DJY2 109 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 LAMTOR5O43504 91 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 NUAK1O60285 661 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 TBC1D4O60343 1298 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 TLR5O60602 858 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 PPFIA4O75335 1185 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 RAD17O75943 681 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 AGFG2O95081 481 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 GABRB3P28472 473 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 VIPR2P41587 438 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 TECP42680 631 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 RABGGTBP53611 331 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 UCP3P55916 312 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 FOXO1Q12778 655 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 FOXL1Q12952 345 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 RAB32Q13637 225 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 GRM7Q14831 915 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 ARL13BQ3SXY8 428 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 PRR16Q569H4 304 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 UTP14CQ5TAP6 766 aaKnown RBP3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 DCAF12L1Q5VU92 463 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 ANO1Q5XXA6 986 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 LMBRD2Q68DH5 695 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 KRT28Q7Z3Y7 464 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 SP8Q8IXZ3 490 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 CACNA2D3Q8IZS8 1091 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 CCDC33Q8N5R6 958 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 FITM2Q8N6M3 262 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 DNAJC5GQ8N7S2 189 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 NUP133Q8WUM0 1156 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 ST8SIA2Q92186 375 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 TFAP2CQ92754 450 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 C18orf8Q96DM3 657 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 IQCDQ96DY2 449 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 MESP1Q9BRJ9 268 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 EIF2AQ9BY44 585 aaKnown RBP3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 TMEM8AQ9HCN3 771 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 XPNPEP3Q9NQH7 507 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 TM7SF3Q9NS93 570 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 GJB4Q9NTQ9 266 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 HESX1Q9UBX0 185 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 PGAP2Q9UHJ9 254 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 CLCA2Q9UQC9 943 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 GPR52Q9Y2T5 361 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 RNF114Q9Y508 228 aa3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 MORC2Q9Y6X9 1032 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P27-201ENST00000431429 CCDC189A1A4V9 331 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 HNRNPDLO14979 420 aaKnown RBP3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 DCLK1O15075 740 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 GNAI2P04899 355 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 GRPP07492 148 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 FCER1AP12319 257 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 KCNJ5P48544 419 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 ALDH9A1P49189 494 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 CARSP49589 748 aaKnown RBP3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 ZNF135P52742 658 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 RAP2BP61225 183 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 PSMC1P62191 440 aaKnown RBP3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 ICA1Q05084 483 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 BOP1Q14137 746 aaKnown RBP3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 PUM3Q15397 648 aaKnown RBP3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 NOMO2Q5JPE7 1267 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 ZFYVE27Q5T4F4 411 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 FAM102AQ5T9C2 384 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 AGAP9Q5VTM2 703 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 FAM160B1Q5W0V3 765 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 SPTY2D1Q68D10 685 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 FCRL6Q6DN72 434 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 LDHAL6AQ6ZMR3 332 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 KIAA0408Q6ZU52 694 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 UNC13DQ70J99 1090 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 BEND5Q7L4P6 421 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 TAX1BP1Q86VP1 789 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 SYTL1Q8IYJ3 562 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 FUKQ8N0W3 1084 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 ANKRD42Q8N9B4 389 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 Q8NA96 180 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 RNF169Q8NCN4 708 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 PDPRQ8NCN5 879 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 LRIG1Q96JA1 1093 aa3.81□□□□□ -1.8
HMGB1P27-201ENST00000431429 KCNC2Q96PR1 638 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms