RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 SCLYQ96I15 445 aa19.52■□□□□ 0.71
HMGN1-206ENST00000431390 ZNF560Q96MR9 790 aa19.52■□□□□ 0.71
HMGN1-206ENST00000431390 SYT11Q9BT88 431 aa19.52■□□□□ 0.71
HMGN1-206ENST00000431390 PPP1R12CQ9BZL4 782 aa19.52■□□□□ 0.71
HMGN1-206ENST00000431390 GOLGA6L9A6NEM1 432 aa19.51■□□□□ 0.71
HMGN1-206ENST00000431390 CYP26A1O43174 497 aa19.51■□□□□ 0.71
HMGN1-206ENST00000431390 KRT5P13647 590 aa19.51■□□□□ 0.71
HMGN1-206ENST00000431390 CYP2C18P33260 490 aa19.51■□□□□ 0.71
HMGN1-206ENST00000431390 CCL23P55773 120 aa19.51■□□□□ 0.71
HMGN1-206ENST00000431390 BPIFB4P59827 614 aa19.51■□□□□ 0.71
HMGN1-206ENST00000431390 BMS1Q14692 1282 aaKnown RBP19.51■□□□□ 0.71
HMGN1-206ENST00000431390 SPA17Q15506 151 aa19.51■□□□□ 0.71
HMGN1-206ENST00000431390 SLC18A3Q16572 532 aa19.51■□□□□ 0.71
HMGN1-206ENST00000431390 TMEM130Q8N3G9 435 aa19.51■□□□□ 0.71
HMGN1-206ENST00000431390 ELAC1Q9H777 363 aaKnown RBP19.51■□□□□ 0.71
HMGN1-206ENST00000431390 CYP3A43Q9HB55 503 aa19.51■□□□□ 0.71
HMGN1-206ENST00000431390 NXF1Q9UBU9 619 aaKnown RBP19.51■□□□□ 0.71
HMGN1-206ENST00000431390 TET1Q8NFU7 2136 aa19.51■□□□□ 0.71
HMGN1-206ENST00000431390 USP27XA6NNY8 438 aa19.5■□□□□ 0.71
HMGN1-206ENST00000431390 SOX4Q06945 474 aaPredicted RBP19.5■□□□□ 0.71
HMGN1-206ENST00000431390 NAB2Q15742 525 aa19.5■□□□□ 0.71
HMGN1-206ENST00000431390 TJAP1Q5JTD0 557 aa19.5■□□□□ 0.71
HMGN1-206ENST00000431390 MFSD5Q6N075 450 aa19.5■□□□□ 0.71
HMGN1-206ENST00000431390 REXO1L1PQ8IX06 675 aa19.5■□□□□ 0.71
HMGN1-206ENST00000431390 RNF169Q8NCN4 708 aa19.5■□□□□ 0.71
HMGN1-206ENST00000431390 EPS8L1Q8TE68 723 aa19.5■□□□□ 0.71
HMGN1-206ENST00000431390 PPP1R13BQ96KQ4 1090 aa19.5■□□□□ 0.71
HMGN1-206ENST00000431390 RNF19AQ9NV58 838 aa19.5■□□□□ 0.71
HMGN1-206ENST00000431390 TMEM161AQ9NX61 479 aa19.5■□□□□ 0.71
HMGN1-206ENST00000431390 TRMT1Q9NXH9 659 aaKnown RBP19.5■□□□□ 0.71
HMGN1-206ENST00000431390 POLIQ9UNA4 740 aa19.5■□□□□ 0.71
HMGN1-206ENST00000431390 REXO2Q9Y3B8 237 aaKnown RBP19.5■□□□□ 0.71
HMGN1-206ENST00000431390 PCDHB4Q9Y5E5 795 aa19.5■□□□□ 0.71
HMGN1-206ENST00000431390 GRXCR1A8MXD5 290 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 ENPP3O14638 875 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 PBX2P40425 430 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 PDE6CP51160 858 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 SCNN1GP51170 649 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 TNNC1P63316 161 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 GRIK3Q13003 919 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 TTC39CQ8N584 583 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.49■□□□□ 0.71
HMGN1-206ENST00000431390 CISHQ9NSE2 258 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 MIOSQ9NXC5 875 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 ADAMTS1Q9UHI8 967 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 NOCTQ9UK39 431 aaKnown RBP19.49■□□□□ 0.71
HMGN1-206ENST00000431390 MICAL3Q7RTP6 2002 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 A0A087X0T9 212 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 ZNF263O14978 683 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 FAM228BP0C875 321 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 CYP11B1P15538 503 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 ZNF132P52740 706 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 GFPT1Q06210 699 aaPredicted RBP19.49■□□□□ 0.71
HMGN1-206ENST00000431390 PPIGQ13427 754 aaKnown RBP eCLIP19.49■□□□□ 0.715e-19■■□□□ 12
HMGN1-206ENST00000431390 TMEM240Q5SV17 173 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 TMEM270Q6UE05 265 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 SCARA5Q6ZMJ2 495 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 ZNF662Q6ZS27 426 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 C16orf59Q7L2K0 433 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 SLC47A2Q86VL8 602 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 ZNF677Q86XU0 584 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 RBBP8NLQ8NC74 664 aaPredicted RBP19.49■□□□□ 0.71
HMGN1-206ENST00000431390 PPM1EQ8WY54 764 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 AGPAT1Q99943 283 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 PBX4Q9BYU1 374 aa19.49■□□□□ 0.71
HMGN1-206ENST00000431390 LUC7LQ9NQ29 371 aaKnown RBP19.49■□□□□ 0.71
HMGN1-206ENST00000431390 RNF216Q9NWF9 866 aaPredicted RBP19.49■□□□□ 0.71
HMGN1-206ENST00000431390 PPEF2O14830 753 aa19.48■□□□□ 0.71
HMGN1-206ENST00000431390 CSF2RAP15509 400 aa19.48■□□□□ 0.71
HMGN1-206ENST00000431390 RPL9P32969 192 aaKnown RBP19.48■□□□□ 0.71
HMGN1-206ENST00000431390 TAF6P49848 677 aa19.48■□□□□ 0.71
HMGN1-206ENST00000431390 SV2CQ496J9 727 aa19.48■□□□□ 0.71
HMGN1-206ENST00000431390 C10orf76Q5T2E6 689 aa19.48■□□□□ 0.71
HMGN1-206ENST00000431390 GLB1LQ6UWU2 654 aa19.48■□□□□ 0.71
HMGN1-206ENST00000431390 TXLNBQ8N3L3 684 aa19.48■□□□□ 0.71
HMGN1-206ENST00000431390 SLC30A5Q8TAD4 765 aa19.48■□□□□ 0.71
HMGN1-206ENST00000431390 OLIG1Q8TAK6 271 aa19.48■□□□□ 0.71
HMGN1-206ENST00000431390 GOLGA2P5Q9HBQ8 144 aa19.48■□□□□ 0.71
HMGN1-206ENST00000431390 GDAP2Q9NXN4 497 aa19.48■□□□□ 0.71
HMGN1-206ENST00000431390 NENFQ9UMX5 172 aa19.48■□□□□ 0.71
HMGN1-206ENST00000431390 ATP8B3O60423 1300 aa19.47■□□□□ 0.71
HMGN1-206ENST00000431390 TTC3P53804 2025 aa19.47■□□□□ 0.71
HMGN1-206ENST00000431390 DDX3XO00571 662 aaKnown RBP eCLIP19.47■□□□□ 0.715e-16■■■■□ 24.5
HMGN1-206ENST00000431390 WEE2P0C1S8 567 aa19.47■□□□□ 0.71
HMGN1-206ENST00000431390 ACRP10323 421 aa19.47■□□□□ 0.71
HMGN1-206ENST00000431390 TNFAIP3P21580 790 aa19.47■□□□□ 0.71
HMGN1-206ENST00000431390 AFF1P51825 1210 aaKnown RBP19.47■□□□□ 0.71
HMGN1-206ENST00000431390 VAV2P52735 878 aa19.47■□□□□ 0.71
HMGN1-206ENST00000431390 CYP27A1Q02318 531 aa19.47■□□□□ 0.71
HMGN1-206ENST00000431390 CNKSR3Q6P9H4 555 aa19.47■□□□□ 0.71
HMGN1-206ENST00000431390 NOP9Q86U38 636 aaKnown RBP19.47■□□□□ 0.71
HMGN1-206ENST00000431390 LNX1Q8TBB1 728 aaPredicted RBP19.47■□□□□ 0.71
HMGN1-206ENST00000431390 GAS2L1Q99501 681 aaPredicted RBP19.47■□□□□ 0.71
HMGN1-206ENST00000431390 SDCBP2Q9H190 292 aa19.47■□□□□ 0.71
HMGN1-206ENST00000431390 SMYD3Q9H7B4 428 aa19.47■□□□□ 0.71
HMGN1-206ENST00000431390 NAGPAQ9UK23 515 aa19.47■□□□□ 0.71
HMGN1-206ENST00000431390 PCDHA13Q9Y5I0 950 aa19.47■□□□□ 0.71
HMGN1-206ENST00000431390 TTC28Q96AY4 2481 aa19.46■□□□□ 0.71
HMGN1-206ENST00000431390 CD58P19256 250 aa19.46■□□□□ 0.71
HMGN1-206ENST00000431390 IBSPP21815 317 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms