RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 KIF3CO14782 793 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 RAD51CO43502 376 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 MYCNP04198 464 aaPredicted RBP17.75■□□□□ 0.43
USHBP1-203ENST00000431146 CYBAP13498 195 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 SNX17Q15036 470 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 GLRA4Q5JXX5 417 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 CXCL17Q6UXB2 119 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 TRIM72Q6ZMU5 477 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 CD101Q93033 1021 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 ZMAT2Q96NC0 199 aaKnown RBP17.75■□□□□ 0.43
USHBP1-203ENST00000431146 CARD9Q9H257 536 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 DPP3Q9NY33 737 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 PIN4Q9Y237 131 aaKnown RBP17.75■□□□□ 0.43
USHBP1-203ENST00000431146 DUSP11O75319 330 aaKnown RBP17.75■□□□□ 0.43
USHBP1-203ENST00000431146 HEXIM1O94992 359 aaKnown RBP17.75■□□□□ 0.43
USHBP1-203ENST00000431146 MCM3P25205 808 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 TNNC1P63316 161 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 KYAT1Q16773 422 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 DCAF4L1Q3SXM0 396 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 NOTUMQ6P988 496 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 UBL4BQ8N7F7 174 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 HPDLQ96IR7 371 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 TWNKQ96RR1 684 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 RPS6KC1Q96S38 1066 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 KATNAL1Q9BW62 490 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 BCO2Q9BYV7 579 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 ST7Q9NRC1 585 aa17.75■□□□□ 0.43
USHBP1-203ENST00000431146 CD19P15391 556 aa17.74■□□□□ 0.43
USHBP1-203ENST00000431146 AKAP5P24588 427 aa17.74■□□□□ 0.43
USHBP1-203ENST00000431146 TNNT3P45378 269 aaPredicted RBP17.74■□□□□ 0.43
USHBP1-203ENST00000431146 PEX5P50542 639 aa17.74■□□□□ 0.43
USHBP1-203ENST00000431146 GUCY2DQ02846 1103 aa17.74■□□□□ 0.43
USHBP1-203ENST00000431146 PTP4A2Q12974 167 aa17.74■□□□□ 0.43
USHBP1-203ENST00000431146 LLGL1Q15334 1064 aa17.74■□□□□ 0.43
USHBP1-203ENST00000431146 TRADDQ15628 312 aa17.74■□□□□ 0.43
USHBP1-203ENST00000431146 KRT222Q8N1A0 295 aa17.74■□□□□ 0.43
USHBP1-203ENST00000431146 SMC1BQ8NDV3 1235 aa17.74■□□□□ 0.43
USHBP1-203ENST00000431146 CALR3Q96L12 384 aaKnown RBP17.74■□□□□ 0.43
USHBP1-203ENST00000431146 TRIM6Q9C030 488 aaPredicted RBP17.74■□□□□ 0.43
USHBP1-203ENST00000431146 AVENQ9NQS1 362 aaPredicted RBP17.74■□□□□ 0.43
USHBP1-203ENST00000431146 MIF4GDA9UHW6 222 aaKnown RBP17.74■□□□□ 0.43
USHBP1-203ENST00000431146 MYBL1P10243 752 aa17.74■□□□□ 0.43
USHBP1-203ENST00000431146 CDC42EP1Q00587 391 aa17.74■□□□□ 0.43
USHBP1-203ENST00000431146 MFSD14CQ5VZR4 134 aa17.74■□□□□ 0.43
USHBP1-203ENST00000431146 PHF13Q86YI8 300 aaPredicted RBP17.74■□□□□ 0.43
USHBP1-203ENST00000431146 TRIM11Q96F44 468 aa17.74■□□□□ 0.43
USHBP1-203ENST00000431146 EPB41L5Q9HCM4 733 aa17.74■□□□□ 0.43
USHBP1-203ENST00000431146 C2CD2Q9Y426 696 aa17.74■□□□□ 0.43
USHBP1-203ENST00000431146 MAP2K7O14733 419 aa17.73■□□□□ 0.43
USHBP1-203ENST00000431146 PPEF2O14830 753 aa17.73■□□□□ 0.43
USHBP1-203ENST00000431146 ATP8B1O43520 1251 aa17.73■□□□□ 0.43
USHBP1-203ENST00000431146 PYGMP11217 842 aa17.73■□□□□ 0.43
USHBP1-203ENST00000431146 RAD23BP54727 409 aa17.73■□□□□ 0.43
USHBP1-203ENST00000431146 MAMLD1Q13495 774 aa17.73■□□□□ 0.43
USHBP1-203ENST00000431146 CASP8Q14790 479 aa17.73■□□□□ 0.43
USHBP1-203ENST00000431146 GLE1Q53GS7 698 aaKnown RBP17.73■□□□□ 0.43
USHBP1-203ENST00000431146 LIN9Q5TKA1 542 aa17.73■□□□□ 0.43
USHBP1-203ENST00000431146 HDXQ7Z353 690 aa17.73■□□□□ 0.43
USHBP1-203ENST00000431146 WDTC1Q8N5D0 677 aa17.73■□□□□ 0.43
USHBP1-203ENST00000431146 WHAMMQ8TF30 809 aa17.73■□□□□ 0.43
USHBP1-203ENST00000431146 C18orf25Q96B23 403 aaPredicted RBP17.73■□□□□ 0.43
USHBP1-203ENST00000431146 WNT8AQ9H1J5 351 aa17.73■□□□□ 0.43
USHBP1-203ENST00000431146 ERVK-5Q9HDB9 667 aa17.73■□□□□ 0.43
USHBP1-203ENST00000431146 KLK14Q9P0G3 267 aa17.73■□□□□ 0.43
USHBP1-203ENST00000431146 TUBGCP4Q9UGJ1 667 aa17.73■□□□□ 0.43
USHBP1-203ENST00000431146 RALGAPA2Q2PPJ7 1873 aa17.73■□□□□ 0.43
USHBP1-203ENST00000431146 SART1O43290 800 aaKnown RBP17.72■□□□□ 0.43
USHBP1-203ENST00000431146 RECQL4O94761 1208 aa17.72■□□□□ 0.43
USHBP1-203ENST00000431146 CTNNA1P35221 906 aaKnown RBP17.72■□□□□ 0.43
USHBP1-203ENST00000431146 POU5F1Q01860 360 aaKnown RBP17.72■□□□□ 0.43
USHBP1-203ENST00000431146 NBPF20Q3BBV1 942 aa17.72■□□□□ 0.43
USHBP1-203ENST00000431146 DENND1BQ6P3S1 775 aa17.72■□□□□ 0.43
USHBP1-203ENST00000431146 IFT81Q8WYA0 676 aa17.72■□□□□ 0.43
USHBP1-203ENST00000431146 SNX27Q96L92 541 aa17.72■□□□□ 0.43
USHBP1-203ENST00000431146 ELOVL4Q9GZR5 314 aa17.72■□□□□ 0.43
USHBP1-203ENST00000431146 AMACRQ9UHK6 382 aa17.72■□□□□ 0.43
USHBP1-203ENST00000431146 ITGA11Q9UKX5 1188 aa17.72■□□□□ 0.43
USHBP1-203ENST00000431146 MYO1FO00160 1098 aa17.72■□□□□ 0.43
USHBP1-203ENST00000431146 ELNP15502 786 aa17.72■□□□□ 0.43
USHBP1-203ENST00000431146 MMP8P22894 467 aa17.72■□□□□ 0.43
USHBP1-203ENST00000431146 ATICP31939 592 aa17.72■□□□□ 0.43
USHBP1-203ENST00000431146 CARSP49589 748 aaKnown RBP17.72■□□□□ 0.43
USHBP1-203ENST00000431146 GJA9P57773 515 aa17.72■□□□□ 0.43
USHBP1-203ENST00000431146 YWHAEP62258 255 aaKnown RBP17.72■□□□□ 0.43
USHBP1-203ENST00000431146 CACNB2Q08289 660 aaPredicted RBP17.72■□□□□ 0.43
USHBP1-203ENST00000431146 MAP9Q49MG5 647 aa17.72■□□□□ 0.43
USHBP1-203ENST00000431146 CYP4A22Q5TCH4 519 aa17.72■□□□□ 0.43
USHBP1-203ENST00000431146 DPH6Q7L8W6 267 aa17.72■□□□□ 0.43
USHBP1-203ENST00000431146 SLC4A11Q8NBS3 891 aa17.72■□□□□ 0.43
USHBP1-203ENST00000431146 RNF39Q9H2S5 420 aa17.72■□□□□ 0.43
USHBP1-203ENST00000431146 TTC7AQ9ULT0 858 aaPredicted RBP17.72■□□□□ 0.43
USHBP1-203ENST00000431146 SCN10AQ9Y5Y9 1956 aa17.72■□□□□ 0.43
USHBP1-203ENST00000431146 HOXC8P31273 242 aa17.71■□□□□ 0.43
USHBP1-203ENST00000431146 YARSP54577 528 aaKnown RBP17.71■□□□□ 0.43
USHBP1-203ENST00000431146 RPL7AP62424 266 aaKnown RBP17.71■□□□□ 0.43
USHBP1-203ENST00000431146 RBP5P82980 135 aa17.71■□□□□ 0.43
USHBP1-203ENST00000431146 C1QBPQ07021 282 aaKnown RBP17.71■□□□□ 0.43
USHBP1-203ENST00000431146 FAM47CQ5HY64 1035 aa17.71■□□□□ 0.43
USHBP1-203ENST00000431146 CELF4Q9BZC1 486 aaKnown RBP17.71■□□□□ 0.43
USHBP1-203ENST00000431146 PCDHA3Q9Y5H8 950 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms