RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 SSX2IPQ9Y2D8 614 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 F8W810 466 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 CYB561D2O14569 222 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 SPTLC1O15269 473 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 PON1P27169 355 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 ASPAP45381 313 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 GLUD2P49448 558 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 CREMQ03060 361 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 YWHAHQ04917 246 aaPredicted RBP11.79□□□□□ -0.52
CHD4-202ENST00000430771 LRMPQ12912 555 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 CUL2Q13617 745 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 NR1I3Q14994 352 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 SPOPLQ6IQ16 392 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 KIAA1841Q6NSI8 718 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 CD300LGQ6UXG3 332 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 NEK11Q8NG66 645 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 LMO3Q8TAP4 145 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 ARNTL2Q8WYA1 636 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 NAP1L5Q96NT1 182 aaPredicted RBP11.79□□□□□ -0.52
CHD4-202ENST00000430771 TTPALQ9BTX7 342 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 BCO2Q9BYV7 579 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 LMAN2LQ9H0V9 348 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 ZBP1Q9H171 429 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 APOBEC3GQ9HC16 384 aaKnown RBP11.79□□□□□ -0.52
CHD4-202ENST00000430771 TLR9Q9NR96 1032 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 ITIH6Q6UXX5 1313 aa11.79□□□□□ -0.52
CHD4-202ENST00000430771 TRIOBPQ9H2D6 2365 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 H3BNC9 293 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 H7C4K7 107 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 I3L4J1 428 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 TEX33O43247 280 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 LPXNO60711 386 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 TACC1O75410 805 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 CYP11A1P05108 521 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 FAM163BP0C2L3 166 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 SLC9A1P19634 815 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 FGFR3P22607 806 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 TKTP29401 623 aaKnown RBP11.78□□□□□ -0.52
CHD4-202ENST00000430771 LHX1P48742 406 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 MFAP3P55082 362 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 KCNMA1Q12791 1236 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 GPM6BQ13491 265 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 TRIM14Q14142 442 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 ZNF697Q5TEC3 545 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 SMYD5Q6GMV2 418 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 ANKS3Q6ZW76 656 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 CEP57Q86XR8 500 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 GPR65Q8IYL9 337 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 VPS52Q8N1B4 723 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 PDCL2Q8N4E4 241 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 POF1BQ8WVV4 589 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 JAKMIP2Q96AA8 810 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 OXCT2Q9BYC2 517 aaPredicted RBP11.78□□□□□ -0.52
CHD4-202ENST00000430771 GPR62Q9BZJ7 368 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 SMYD3Q9H7B4 428 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 GRPEL1Q9HAV7 217 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.78□□□□□ -0.522e-11■■■■■ 90.7
CHD4-202ENST00000430771 ENTPD7Q9NQZ7 604 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.78□□□□□ -0.52
CHD4-202ENST00000430771 FAM207AQ9NSI2 230 aaPredicted RBP11.78□□□□□ -0.52
CHD4-202ENST00000430771 FBXL5Q9UKA1 691 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 L1RE1Q9UN81 338 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 POLIQ9UNA4 740 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 SIK3Q9Y2K2 1263 aa11.78□□□□□ -0.52
CHD4-202ENST00000430771 FSD2A1L4K1 749 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 LRRN2O75325 713 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 EFEMP2O95967 443 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 CTSAP10619 480 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 UCHL3P15374 230 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 WARSP23381 471 aaKnown RBP11.77□□□□□ -0.53
CHD4-202ENST00000430771 PCSK1P29120 753 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 CA8P35219 290 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 DSG1Q02413 1049 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 INCA1Q0VD86 236 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 SMC1AQ14683 1233 aaKnown RBP11.77□□□□□ -0.53
CHD4-202ENST00000430771 PSMD5Q16401 504 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 PTPROQ16827 1216 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 VARS2Q5ST30 1063 aaKnown RBP11.77□□□□□ -0.53
CHD4-202ENST00000430771 KLHDC7AQ5VTJ3 777 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 WSCD1Q658N2 575 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 OVOS1Q6IE37 1185 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 PDE12Q6L8Q7 609 aaKnown RBP11.77□□□□□ -0.53
CHD4-202ENST00000430771 SPRED2Q7Z698 418 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 FMNL3Q8IVF7 1028 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 ARHGEF19Q8IW93 802 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 THEM5Q8N1Q8 247 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 GDPD5Q8WTR4 605 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 PIK3R5Q8WYR1 880 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 MRFAP1L1Q96HT8 127 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 TCF25Q9BQ70 676 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 NUP58Q9BVL2 599 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 VN1R3Q9BXE9 311 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 GANQ9H2C0 597 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 SNX25Q9H3E2 840 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 ZNF576Q9H609 170 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 CERS4Q9HA82 394 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 ALG13Q9NP73 1137 aaKnown RBP11.77□□□□□ -0.53
CHD4-202ENST00000430771 SIX2Q9NPC8 291 aa11.77□□□□□ -0.53
CHD4-202ENST00000430771 NGRNQ9NPE2 291 aaKnown RBP11.77□□□□□ -0.53
CHD4-202ENST00000430771 MRPL17Q9NRX2 175 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms