RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 GANCQ8TET4 914 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 UROC1Q96N76 676 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 POP1Q99575 1024 aaKnown RBP13.66□□□□□ -0.22
PTCH1-207ENST00000429896 GABRQQ9UN88 632 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 IGLV3-22A0A075B6J6 115 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 CD44P16070 742 aaKnown RBP13.66□□□□□ -0.22
PTCH1-207ENST00000429896 JADE1Q6IE81 842 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 PPP1R13BQ96KQ4 1090 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 SLITRK1Q96PX8 696 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 WDR35Q9P2L0 1181 aa13.66□□□□□ -0.22
PTCH1-207ENST00000429896 SIPA1L3O60292 1781 aaPredicted RBP13.65□□□□□ -0.22
PTCH1-207ENST00000429896 RWDD2BP57060 319 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 TRAPPC11Q7Z392 1133 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 FIBCD1Q8N539 461 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 USP20Q9Y2K6 914 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 SLC4A7Q9Y6M7 1214 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.65□□□□□ -0.22
PTCH1-207ENST00000429896 RTN2O75298 545 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 COG7P83436 770 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 MAP3K10Q02779 954 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 CYP4A22Q5TCH4 519 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 FIS1Q9Y3D6 152 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 PODXLO00592 558 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 NNMTP40261 264 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 PTENP60484 403 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 PTK7Q13308 1070 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 E2F4Q16254 413 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 KIAA0319LQ8IZA0 1049 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 RSRC1Q96IZ7 334 aaKnown RBP13.65□□□□□ -0.22
PTCH1-207ENST00000429896 TJP2Q9UDY2 1190 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 PCDHA2Q9Y5H9 948 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 TREHO43280 583 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 CREB3O43889 395 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 BNIP3LO60238 219 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 RECQLP46063 649 aaPredicted RBP13.65□□□□□ -0.22
PTCH1-207ENST00000429896 RTP1P59025 263 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 GABPB1Q06547 395 aaPredicted RBP13.65□□□□□ -0.22
PTCH1-207ENST00000429896 KLHDC7AQ5VTJ3 777 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 AFAP1L2Q8N4X5 818 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 ZNF558Q96NG5 402 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 NIFKQ9BYG3 293 aaKnown RBP13.65□□□□□ -0.22
PTCH1-207ENST00000429896 UMODL1Q5DID0 1318 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 GSTA1P08263 222 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 GSTA2P09210 222 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 SESN3P58005 492 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 RPL10AP62906 217 aaKnown RBP13.65□□□□□ -0.22
PTCH1-207ENST00000429896 BRSK2Q8IWQ3 736 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 KIAA0895Q8NCT3 520 aa13.65□□□□□ -0.22
PTCH1-207ENST00000429896 ADCY6O43306 1168 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 RECQL4O94761 1208 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 MLH1P40692 756 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 FAM171A1Q5VUB5 890 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 ZNF677Q86XU0 584 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 UBA3Q8TBC4 463 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 ZBTB45Q96K62 511 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-207ENST00000429896 GAD1Q99259 594 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 ARHGAP42A6NI28 874 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 CASQ2O14958 399 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-207ENST00000429896 FGBP02675 491 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 BCAR1P56945 870 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 YWHAHQ04917 246 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-207ENST00000429896 RUFY4Q6ZNE9 571 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 SH3BP1Q9Y3L3 701 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 ANKRD63C9JTQ0 380 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 ATF2P15336 505 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 ARHGEF18Q6ZSZ5 1173 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 CCDC13Q8IYE1 715 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 MCUQ8NE86 351 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 CPA5Q8WXQ8 436 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 RBM41Q96IZ5 413 aaKnown RBP13.64□□□□□ -0.23
PTCH1-207ENST00000429896 TRAF3IP3Q9Y228 551 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 GJB1P08034 283 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 KLRC2P26717 231 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 SCNN1GP51170 649 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 EPHB3P54753 998 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 DENND2CQ68D51 928 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 SLC35F6Q8N357 371 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 BBOF1Q8ND07 529 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 CYP3A43Q9HB55 503 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 BAG2O95816 211 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 KRT3P12035 628 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 BRD2P25440 801 aaKnown RBP13.64□□□□□ -0.23
PTCH1-207ENST00000429896 MYL6P60660 151 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 PLD1Q13393 1074 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 NOMO2Q5JPE7 1267 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 TRIM68Q6AZZ1 485 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 CENPPQ6IPU0 288 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 TSC1Q92574 1164 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 PBKQ96KB5 322 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 RMDN2Q96LZ7 410 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 INTS13Q9NVM9 706 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 KIAA1257Q9ULG3 409 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 MYH3P11055 1940 aa13.64□□□□□ -0.23
PTCH1-207ENST00000429896 PFDN6O15212 129 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 GTF2BQ00403 316 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 OVOS1Q6IE37 1185 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 TAOK1Q7L7X3 1001 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 HELQQ8TDG4 1101 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 SLX4Q8IY92 1834 aa13.63□□□□□ -0.23
PTCH1-207ENST00000429896 TLL1O43897 1013 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms