RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 EPS8L3Q8TE67 593 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 TRIM51Q9BSJ1 452 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 NUF2Q9BZD4 464 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 KLHL25Q9H0H3 589 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 PCDHB13Q9Y5F0 798 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 ADCY6O43306 1168 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 USP11P51784 963 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 MIIPQ5JXC2 388 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 C11orf74Q86VG3 221 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 SH3TC2Q8TF17 1288 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 COX4I2Q96KJ9 171 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 DDX4Q9NQI0 724 aaKnown RBP15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 DCTN4Q9UJW0 460 aa15.18■□□□□ 0.02
SYNGAP1-203ENST00000428982 TTLL13PA6NNM8 815 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 RSPH10B2B2RC85 870 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 RSPH10BP0C881 870 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 TKTP29401 623 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 TUBA4AP68366 448 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 UAP1Q16222 522 aaPredicted RBP15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 TMEM214Q6NUQ4 689 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 GADL1Q6ZQY3 521 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 PDZD8Q8NEN9 1154 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 FERMT1Q9BQL6 677 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 C10orf88Q9H8K7 445 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 XAB2Q9HCS7 855 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 GGA3Q9NZ52 723 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 EFR3BQ9Y2G0 817 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 TIAM2Q8IVF5 1701 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 MYH7P12883 1935 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 A0A0G2JND7 137 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 DDTLA6NHG4 134 aaPredicted RBP15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 SLC16A3O15427 465 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 FGFR4P22455 802 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 ZNF543Q08ER8 600 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 NLRP9Q7RTR0 991 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 C14orf80Q86SX3 495 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 ECSITQ9BQ95 431 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 SLC39A3Q9BRY0 314 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 MRPL1Q9BYD6 325 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 CELF4Q9BZC1 486 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 ATP11BQ9Y2G3 1177 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 WNT7AO00755 349 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 CDH3P22223 829 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 GEMIN4P57678 1058 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 BASP1P80723 227 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 PALB2Q86YC2 1186 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 KIAA0895Q8NCT3 520 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 CCDC138Q96M89 665 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 PAIP1Q9H074 479 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 DEFB129Q9H1M3 183 aa15.17■□□□□ 0.02
SYNGAP1-203ENST00000428982 MIF4GDA9UHW6 222 aaKnown RBP15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 PDXKO00764 312 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 THAP12O43422 761 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 SPARCL1Q14515 664 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 ZC2HC1CQ53FD0 456 aaPredicted RBP15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 TAF1BQ53T94 588 aaPredicted RBP15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 FAM83AQ86UY5 434 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 MYCT1Q8N699 235 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 COQ7Q99807 217 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 HAUS8Q9BT25 410 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 TYW1Q9NV66 732 aaKnown RBP15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 TMEM260Q9NX78 707 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 HACL1Q9UJ83 578 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 SSX2IPQ9Y2D8 614 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 USP17L10C9JJH3 530 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 FBP2O00757 339 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 FGGP02679 453 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 KNOP1Q1ED39 458 aaKnown RBP15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 SPDYE2Q495Y8 402 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 MEI1Q5TIA1 1274 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 CCSAPQ6IQ19 270 aaPredicted RBP15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 RHOT2Q8IXI1 618 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 SLC15A3Q8IY34 581 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 SLC35B4Q969S0 331 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 TLCD1Q96CP7 247 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 TRPV5Q9NQA5 729 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 USP20Q9Y2K6 914 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 CNOT3O75175 753 aaKnown RBP15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 TDP2O95551 362 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 GSTM4Q03013 218 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 EPM2AIP1Q7L775 607 aaPredicted RBP15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 PASD1Q8IV76 773 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 HAPLN3Q96S86 360 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 HEY1Q9Y5J3 304 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 TSPAN9O75954 239 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 LONRF1Q17RB8 773 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 ZFYVE27Q5T4F4 411 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 SUN5Q8TC36 379 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 DDI1Q8WTU0 396 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 ZBED2Q9BTP6 218 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 GRIP2Q9C0E4 1043 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 UBN1Q9NPG3 1134 aa15.16■□□□□ 0.02
SYNGAP1-203ENST00000428982 CCNB1P14635 433 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 ACADVLP49748 655 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 PPP2R5CQ13362 524 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 FOXB2Q5VYV0 432 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 C4orf50Q6ZRC1 276 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 ADGRF4Q8IZF3 695 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 FNDC8Q8TC99 324 aa15.15■□□□□ 0.02
SYNGAP1-203ENST00000428982 ACTRT1Q8TDG2 376 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms