RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 PI4K2AQ9BTU6 479 aa15.65■□□□□ 0.1
SGCE-204ENST00000428696 APOL5Q9BWW9 433 aa15.65■□□□□ 0.1
SGCE-204ENST00000428696 TMEM8AQ9HCN3 771 aa15.65■□□□□ 0.1
SGCE-204ENST00000428696 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.65■□□□□ 0.1
SGCE-204ENST00000428696 CDY1Q9Y6F8 540 aa15.65■□□□□ 0.1
SGCE-204ENST00000428696 COL4A4P53420 1690 aaPredicted RBP15.64■□□□□ 0.09
SGCE-204ENST00000428696 M0QZQ0 153 aa15.64■□□□□ 0.09
SGCE-204ENST00000428696 ADAM12O43184 909 aa15.64■□□□□ 0.09
SGCE-204ENST00000428696 LILRB3O75022 631 aa15.64■□□□□ 0.09
SGCE-204ENST00000428696 VNN1O95497 513 aa15.64■□□□□ 0.09
SGCE-204ENST00000428696 EFEMP2O95967 443 aa15.64■□□□□ 0.09
SGCE-204ENST00000428696 MXI1P50539 228 aa15.64■□□□□ 0.09
SGCE-204ENST00000428696 SGSM1Q2NKQ1 1148 aa15.64■□□□□ 0.09
SGCE-204ENST00000428696 ZACNQ401N2 412 aa15.64■□□□□ 0.09
SGCE-204ENST00000428696 CT47A1Q5JQC4 288 aaPredicted RBP15.64■□□□□ 0.09
SGCE-204ENST00000428696 KRT39Q6A163 491 aa15.64■□□□□ 0.09
SGCE-204ENST00000428696 SCARA5Q6ZMJ2 495 aa15.64■□□□□ 0.09
SGCE-204ENST00000428696 CXorf38Q8TB03 319 aa15.64■□□□□ 0.09
SGCE-204ENST00000428696 TAS1R2Q8TE23 839 aa15.64■□□□□ 0.09
SGCE-204ENST00000428696 HLA-CQ95604 372 aa15.64■□□□□ 0.09
SGCE-204ENST00000428696 CDCA3Q99618 268 aaPredicted RBP15.64■□□□□ 0.09
SGCE-204ENST00000428696 CLSTN3Q9BQT9 956 aa15.64■□□□□ 0.09
SGCE-204ENST00000428696 IMPG2Q9BZV3 1241 aa15.64■□□□□ 0.09
SGCE-204ENST00000428696 PRDM6Q9NQX0 595 aa15.64■□□□□ 0.09
SGCE-204ENST00000428696 DSEQ9UL01 958 aa15.64■□□□□ 0.09
SGCE-204ENST00000428696 POLIQ9UNA4 740 aa15.64■□□□□ 0.09
SGCE-204ENST00000428696 NFE2L3Q9Y4A8 694 aa15.64■□□□□ 0.09
SGCE-204ENST00000428696 H3BQ06 376 aaPredicted RBP15.63■□□□□ 0.09
SGCE-204ENST00000428696 NCK2O43639 380 aa15.63■□□□□ 0.09
SGCE-204ENST00000428696 SRGAP2BP0DMP2 458 aa15.63■□□□□ 0.09
SGCE-204ENST00000428696 CPB1P15086 417 aa15.63■□□□□ 0.09
SGCE-204ENST00000428696 EPCAMP16422 314 aa15.63■□□□□ 0.09
SGCE-204ENST00000428696 KCNA5P22460 613 aa15.63■□□□□ 0.09
SGCE-204ENST00000428696 ATICP31939 592 aa15.63■□□□□ 0.09
SGCE-204ENST00000428696 GTF2H1P32780 548 aa15.63■□□□□ 0.09
SGCE-204ENST00000428696 ZSCAN23Q3MJ62 389 aa15.63■□□□□ 0.09
SGCE-204ENST00000428696 ZNF667Q5HYK9 610 aa15.63■□□□□ 0.09
SGCE-204ENST00000428696 ZNF280DQ6N043 979 aa15.63■□□□□ 0.09
SGCE-204ENST00000428696 FOXR2Q6PJQ5 311 aa15.63■□□□□ 0.09
SGCE-204ENST00000428696 RSPO2Q6UXX9 243 aaPredicted RBP15.63■□□□□ 0.09
SGCE-204ENST00000428696 PPFIBP1Q86W92 1011 aa15.63■□□□□ 0.09
SGCE-204ENST00000428696 FAM114A1Q8IWE2 563 aa15.63■□□□□ 0.09
SGCE-204ENST00000428696 EFHBQ8N7U6 833 aa15.63■□□□□ 0.09
SGCE-204ENST00000428696 SNX25Q9H3E2 840 aa15.63■□□□□ 0.09
SGCE-204ENST00000428696 RXFP1Q9HBX9 757 aa15.63■□□□□ 0.09
SGCE-204ENST00000428696 SAMSN1Q9NSI8 373 aaKnown RBP15.63■□□□□ 0.09
SGCE-204ENST00000428696 FNIP2Q9P278 1114 aa15.63■□□□□ 0.09
SGCE-204ENST00000428696 FBXL5Q9UKA1 691 aa15.63■□□□□ 0.09
SGCE-204ENST00000428696 BARX2Q9UMQ3 279 aaPredicted RBP15.63■□□□□ 0.09
SGCE-204ENST00000428696 IRAK3Q9Y616 596 aa15.63■□□□□ 0.09
SGCE-204ENST00000428696 GLUD1P00367 558 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 PDGFRBP09619 1106 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 OR4Q2P0C623 313 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 CDK11BP21127 795 aaKnown RBP15.62■□□□□ 0.09
SGCE-204ENST00000428696 ELF1P32519 619 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 AARSP49588 968 aaKnown RBP eCLIP15.62■□□□□ 0.09
SGCE-204ENST00000428696 MYL7Q01449 175 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 CETN1Q12798 172 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 KCNH2Q12809 1159 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 LRMPQ12912 555 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 ADAM15Q13444 863 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 CBWD6Q4V339 395 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 WDR44Q5JSH3 913 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 CBWD3Q5JTY5 395 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 CBWD5Q5RIA9 395 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 SPOPLQ6IQ16 392 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 ADGRF2Q8IZF7 708 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 PDCL2Q8N4E4 241 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 AOPEPQ8N6M6 819 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 OR6B3Q8NGW1 331 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 ENOX1Q8TC92 643 aaKnown RBP15.62■□□□□ 0.09
SGCE-204ENST00000428696 THAP9Q9H5L6 903 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 FANCLQ9NW38 375 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 MTRRQ9UBK8 725 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 L1RE1Q9UN81 338 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 BACE2Q9Y5Z0 518 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 HCFC2Q9Y5Z7 792 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 ANK1P16157 1881 aa15.62■□□□□ 0.09
SGCE-204ENST00000428696 TGM5O43548 720 aa15.61■□□□□ 0.09
SGCE-204ENST00000428696 OAZ2O95190 189 aa15.61■□□□□ 0.09
SGCE-204ENST00000428696 AFPP02771 609 aaKnown RBP15.61■□□□□ 0.09
SGCE-204ENST00000428696 P4HA1P13674 534 aa15.61■□□□□ 0.09
SGCE-204ENST00000428696 PRKCSHP14314 528 aaPredicted RBP15.61■□□□□ 0.09
SGCE-204ENST00000428696 TYMPP19971 482 aa15.61■□□□□ 0.09
SGCE-204ENST00000428696 ACAT1P24752 427 aaKnown RBP15.61■□□□□ 0.09
SGCE-204ENST00000428696 CDH8P55286 799 aa15.61■□□□□ 0.09
SGCE-204ENST00000428696 MYL5Q02045 173 aa15.61■□□□□ 0.09
SGCE-204ENST00000428696 SOWAHAQ2M3V2 549 aa15.61■□□□□ 0.09
SGCE-204ENST00000428696 TRIM59Q8IWR1 403 aa15.61■□□□□ 0.09
SGCE-204ENST00000428696 C12orf76Q8N812 135 aaPredicted RBP15.61■□□□□ 0.09
SGCE-204ENST00000428696 FBXL13Q8NEE6 735 aa15.61■□□□□ 0.09
SGCE-204ENST00000428696 SLC35C1Q96A29 364 aa15.61■□□□□ 0.09
SGCE-204ENST00000428696 PABPC5Q96DU9 382 aaKnown RBP15.61■□□□□ 0.09
SGCE-204ENST00000428696 PGLYRP2Q96PD5 576 aa15.61■□□□□ 0.09
SGCE-204ENST00000428696 XYLT2Q9H1B5 865 aa15.61■□□□□ 0.09
SGCE-204ENST00000428696 RAB20Q9NX57 234 aa15.61■□□□□ 0.09
SGCE-204ENST00000428696 GDAP2Q9NXN4 497 aa15.61■□□□□ 0.09
SGCE-204ENST00000428696 DDX43Q9NXZ2 648 aaKnown RBP15.61■□□□□ 0.09
SGCE-204ENST00000428696 EYSQ5T1H1 3165 aa15.61■□□□□ 0.09
SGCE-204ENST00000428696 BECN2A8MW95 431 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms