RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 CRISPLD1Q9H336 500 aa19.94■□□□□ 0.78
UPK3BP1-201ENST00000428678 CFAP47Q6ZTR5 3102 aa19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 SPAG17Q6Q759 2223 aa19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 OR6C75A6NL08 312 aa19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 SPECC1L-ADORA2AF8WAN1 911 aa19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 K7ESF4 209 aa19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 DPYSL4O14531 572 aa19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 CLDN3O15551 220 aa19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 CNR2P34972 360 aa19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 SMTNP53814 917 aa19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 FCHO2Q0JRZ9 810 aa19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 TXNDC11Q6PKC3 985 aa19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 DSTYKQ6XUX3 929 aa19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 CEP68Q76N32 757 aa19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 ARID3BQ8IVW6 561 aaPredicted RBP19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 FAM184AQ8NB25 1140 aa19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 TMEM161BQ8NDZ6 487 aa19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 SPIRE2Q8WWL2 714 aa19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 ZFYVE19Q96K21 471 aa19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 LLPHQ9BRT6 129 aaKnown RBP19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 NTPCRQ9BSD7 190 aaKnown RBP19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 TIPINQ9BVW5 301 aa19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 LIMCH1Q9UPQ0 1083 aa19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 SLC27A5Q9Y2P5 690 aa19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 PCDHB6Q9Y5E3 794 aa19.93■□□□□ 0.78
UPK3BP1-201ENST00000428678 GDF9O60383 454 aa19.92■□□□□ 0.78
UPK3BP1-201ENST00000428678 PAPSS2O95340 614 aaPredicted RBP19.92■□□□□ 0.78
UPK3BP1-201ENST00000428678 CLTAP09496 248 aa19.92■□□□□ 0.78
UPK3BP1-201ENST00000428678 MAPTP10636 758 aaKnown RBP19.92■□□□□ 0.78
UPK3BP1-201ENST00000428678 PLS3P13797 630 aa19.92■□□□□ 0.78
UPK3BP1-201ENST00000428678 GUCY2CP25092 1073 aa19.92■□□□□ 0.78
UPK3BP1-201ENST00000428678 LRPAP1P30533 357 aa19.92■□□□□ 0.78
UPK3BP1-201ENST00000428678 CTHP32929 405 aa19.92■□□□□ 0.78
UPK3BP1-201ENST00000428678 MCL1Q07820 350 aa19.92■□□□□ 0.78
UPK3BP1-201ENST00000428678 GPR17Q13304 367 aa19.92■□□□□ 0.78
UPK3BP1-201ENST00000428678 ST3GAL2Q16842 350 aa19.92■□□□□ 0.78
UPK3BP1-201ENST00000428678 WDR44Q5JSH3 913 aa19.92■□□□□ 0.78
UPK3BP1-201ENST00000428678 DGKKQ5KSL6 1271 aa19.92■□□□□ 0.78
UPK3BP1-201ENST00000428678 ZPBP2Q6X784 338 aa19.92■□□□□ 0.78
UPK3BP1-201ENST00000428678 RALGPS2Q86X27 583 aaPredicted RBP19.92■□□□□ 0.78
UPK3BP1-201ENST00000428678 BICD1Q96G01 975 aa19.92■□□□□ 0.78
UPK3BP1-201ENST00000428678 PLEKHA5Q9HAU0 1116 aa19.92■□□□□ 0.78
UPK3BP1-201ENST00000428678 NUP210Q8TEM1 1887 aaPredicted RBP19.91■□□□□ 0.78
UPK3BP1-201ENST00000428678 MYBPHLA2RUH7 354 aa19.91■□□□□ 0.78
UPK3BP1-201ENST00000428678 TOB1P50616 345 aaPredicted RBP19.91■□□□□ 0.78
UPK3BP1-201ENST00000428678 GUCY2FP51841 1108 aa19.91■□□□□ 0.78
UPK3BP1-201ENST00000428678 PPP2R3AQ06190 1150 aa19.91■□□□□ 0.78
UPK3BP1-201ENST00000428678 PON2Q15165 354 aa19.91■□□□□ 0.78
UPK3BP1-201ENST00000428678 ARHGAP29Q52LW3 1261 aa19.91■□□□□ 0.78
UPK3BP1-201ENST00000428678 OVOS1Q6IE37 1185 aa19.91■□□□□ 0.78
UPK3BP1-201ENST00000428678 CENPPQ6IPU0 288 aa19.91■□□□□ 0.78
UPK3BP1-201ENST00000428678 DTHD1Q6ZMT9 781 aa19.91■□□□□ 0.78
UPK3BP1-201ENST00000428678 HAUS6Q7Z4H7 955 aa19.91■□□□□ 0.78
UPK3BP1-201ENST00000428678 ATAD1Q8NBU5 361 aa19.91■□□□□ 0.78
UPK3BP1-201ENST00000428678 MMTAG2Q9BU76 263 aaKnown RBP19.91■□□□□ 0.78
UPK3BP1-201ENST00000428678 ATXN3LQ9H3M9 355 aa19.91■□□□□ 0.78
UPK3BP1-201ENST00000428678 C2orf42Q9NWW7 574 aa19.91■□□□□ 0.78
UPK3BP1-201ENST00000428678 GTSE1Q9NYZ3 720 aa19.91■□□□□ 0.78
UPK3BP1-201ENST00000428678 KCNG1Q9UIX4 513 aa19.91■□□□□ 0.78
UPK3BP1-201ENST00000428678 UBQLN1Q9UMX0 589 aaKnown RBP19.91■□□□□ 0.78
UPK3BP1-201ENST00000428678 ASB3Q9Y575 518 aa19.91■□□□□ 0.78
UPK3BP1-201ENST00000428678 CACNA1GO43497 2377 aa19.91■□□□□ 0.78
UPK3BP1-201ENST00000428678 TTC26A0AVF1 554 aa19.9■□□□□ 0.78
UPK3BP1-201ENST00000428678 MTMR11A4FU01 709 aa19.9■□□□□ 0.78
UPK3BP1-201ENST00000428678 SOAT2O75908 522 aa19.9■□□□□ 0.78
UPK3BP1-201ENST00000428678 AARSP49588 968 aaKnown RBP eCLIP19.9■□□□□ 0.78
UPK3BP1-201ENST00000428678 HMGN5P82970 282 aaKnown RBP19.9■□□□□ 0.78
UPK3BP1-201ENST00000428678 IL17AQ16552 155 aa19.9■□□□□ 0.78
UPK3BP1-201ENST00000428678 ARHGAP15Q53QZ3 475 aa19.9■□□□□ 0.78
UPK3BP1-201ENST00000428678 GPR158Q5T848 1215 aa19.9■□□□□ 0.78
UPK3BP1-201ENST00000428678 GAREM2Q75VX8 874 aa19.9■□□□□ 0.78
UPK3BP1-201ENST00000428678 DNAJB7Q7Z6W7 309 aaPredicted RBP19.9■□□□□ 0.78
UPK3BP1-201ENST00000428678 FAM160A2Q8N612 972 aaPredicted RBP19.9■□□□□ 0.78
UPK3BP1-201ENST00000428678 TTC9BQ8N6N2 239 aa19.9■□□□□ 0.78
UPK3BP1-201ENST00000428678 PSMG2Q969U7 264 aa19.9■□□□□ 0.78
UPK3BP1-201ENST00000428678 CHAMP1Q96JM3 812 aa19.9■□□□□ 0.78
UPK3BP1-201ENST00000428678 LRRC3BQ96PB8 259 aa19.9■□□□□ 0.78
UPK3BP1-201ENST00000428678 MKNK1Q9BUB5 465 aa19.9■□□□□ 0.78
UPK3BP1-201ENST00000428678 HAPLN2Q9GZV7 340 aa19.9■□□□□ 0.78
UPK3BP1-201ENST00000428678 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.9■□□□□ 0.78
UPK3BP1-201ENST00000428678 KIF26AQ9ULI4 1882 aaPredicted RBP19.9■□□□□ 0.78
UPK3BP1-201ENST00000428678 LACTBL1A8MY62 500 aa19.89■□□□□ 0.77
UPK3BP1-201ENST00000428678 LAD1O00515 517 aa19.89■□□□□ 0.77
UPK3BP1-201ENST00000428678 XPOTO43592 962 aaKnown RBP19.89■□□□□ 0.77
UPK3BP1-201ENST00000428678 FOXD2O60548 495 aaPredicted RBP19.89■□□□□ 0.77
UPK3BP1-201ENST00000428678 FGF19O95750 216 aa19.89■□□□□ 0.77
UPK3BP1-201ENST00000428678 CYP3A5P20815 502 aa19.89■□□□□ 0.77
UPK3BP1-201ENST00000428678 U2AF2P26368 475 aaKnown RBP eCLIP19.89■□□□□ 0.77
UPK3BP1-201ENST00000428678 GABRR2P28476 465 aa19.89■□□□□ 0.77
UPK3BP1-201ENST00000428678 TNFSF9P41273 254 aa19.89■□□□□ 0.77
UPK3BP1-201ENST00000428678 MYBPC2Q14324 1141 aa19.89■□□□□ 0.77
UPK3BP1-201ENST00000428678 ZBTB6Q15916 424 aa19.89■□□□□ 0.77
UPK3BP1-201ENST00000428678 ARMCX5Q6P1M9 558 aa19.89■□□□□ 0.77
UPK3BP1-201ENST00000428678 LAMA1P25391 3075 aa19.88■□□□□ 0.77
UPK3BP1-201ENST00000428678 PPEF2O14830 753 aa19.88■□□□□ 0.77
UPK3BP1-201ENST00000428678 PRAMEF12O95522 483 aa19.88■□□□□ 0.77
UPK3BP1-201ENST00000428678 TYMPP19971 482 aa19.88■□□□□ 0.77
UPK3BP1-201ENST00000428678 HOXC13P31276 330 aa19.88■□□□□ 0.77
UPK3BP1-201ENST00000428678 PRPHP41219 470 aa19.88■□□□□ 0.77
UPK3BP1-201ENST00000428678 TNK2Q07912 1038 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms