RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 WDR27A2RRH5 827 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 ZNF785A8K8V0 405 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 KIF20AO95235 890 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 ERBB2P04626 1255 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 GJB1P08034 283 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 RHOP08100 348 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 SRGNP10124 158 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 CCND1P24385 295 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 FOLR3P41439 243 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 C21orf58P58505 322 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 MXRA7P84157 204 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 SP2Q02086 613 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 PTPROQ16827 1216 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 CCDC142Q17RM4 750 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 TAF2Q6P1X5 1199 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 PEG10Q86TG7 708 aaKnown RBP4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 SH2D3CQ8N5H7 860 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 PLBD2Q8NHP8 589 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 HOMER2Q9NSB8 354 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 SEMA4GQ9NTN9 838 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 PTGFRNQ9P2B2 879 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 DKK3Q9UBP4 350 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 ADAM21Q9UKJ8 722 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 ST3GAL5Q9UNP4 418 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 INSL6Q9Y581 213 aa4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 CFAP20Q9Y6A4 193 aaKnown RBP4.43□□□□□ -1.7
TIMM9P3-201ENST00000428659 CCDC195A0A1B0GUA6 201 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 PROM1O43490 865 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 ALDH2P05091 517 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 CHRM2P08172 466 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 PDHA1P08559 390 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 HDCP19113 662 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 FBLP22087 321 aaKnown RBP4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 RECQLP46063 649 aaPredicted RBP4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 ANXA11P50995 505 aaKnown RBP4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 PROK1P58294 105 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 BLOC1S1P78537 153 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 ZNF844Q08AG5 666 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 NOGQ13253 232 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 HABP2Q14520 560 aaPredicted RBP4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 USP45Q70EL2 814 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 HEATR3Q7Z4Q2 680 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 CLNKQ7Z7G1 428 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 TTC7BQ86TV6 843 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 COLGALT2Q8IYK4 626 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 VOPP1Q96AW1 172 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 TRIB1Q96RU8 372 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 AMBRA1Q9C0C7 1298 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 KIAA1586Q9HCI6 787 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 ABCF2Q9UG63 623 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 IP6K2Q9UHH9 426 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 LUC7L2Q9Y383 392 aaKnown RBP4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 PCDHA1Q9Y5I3 950 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 ADGRA2Q96PE1 1338 aa4.42□□□□□ -1.7
TIMM9P3-201ENST00000428659 FNDC1Q4ZHG4 1894 aaPredicted RBP4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 POLRMTO00411 1230 aaKnown RBP4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 TOR1BO14657 336 aa4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 PEX1O43933 1283 aa4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 PPFIA2O75334 1257 aa4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 ITPKBP27987 946 aa4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 ZNF135P52742 658 aaPredicted RBP4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 HK3P52790 923 aa4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 CACNA2D1P54289 1103 aa4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 RPS7P62081 194 aaKnown RBP4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 POU6F2P78424 691 aaPredicted RBP4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 ZNF267Q14586 743 aaPredicted RBP4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 TXNRD1Q16881 649 aa4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 RAVER1Q8IY67 606 aaKnown RBP4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 FAM9AQ8IZU1 332 aaPredicted RBP4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 C3orf20Q8ND61 904 aa4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 TOR1AIP2Q8NFQ8 470 aa4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 CAGE1Q8TC20 777 aa4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 TNPO1Q92973 898 aaKnown RBP4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 HOOK2Q96ED9 719 aa4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 FBXL20Q96IG2 436 aa4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 DUSP26Q9BV47 211 aa4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 MRPL46Q9H2W6 279 aaKnown RBP4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 BRD9Q9H8M2 597 aa4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 GPR35Q9HC97 309 aa4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 SERHLQ9NQF3 203 aa4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 INTS13Q9NVM9 706 aa4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 LRIT1Q9P2V4 623 aa4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 SETD1BQ9UPS6 1966 aaKnown RBP4.41□□□□□ -1.7
TIMM9P3-201ENST00000428659 LOC105371045A0A1W2PR82 267 aa4.4□□□□□ -1.71
TIMM9P3-201ENST00000428659 LINC00473A8K010 186 aa4.4□□□□□ -1.71
TIMM9P3-201ENST00000428659 RBMXL2O75526 392 aaKnown RBP4.4□□□□□ -1.71
TIMM9P3-201ENST00000428659 SNUPNO95149 360 aaKnown RBP4.4□□□□□ -1.71
TIMM9P3-201ENST00000428659 NKX6-1P78426 367 aaPredicted RBP4.4□□□□□ -1.71
TIMM9P3-201ENST00000428659 KRTAP1-1Q07627 177 aa4.4□□□□□ -1.71
TIMM9P3-201ENST00000428659 KIF22Q14807 665 aa4.4□□□□□ -1.71
TIMM9P3-201ENST00000428659 TMEM240Q5SV17 173 aa4.4□□□□□ -1.71
TIMM9P3-201ENST00000428659 VPS53Q5VIR6 699 aa4.4□□□□□ -1.71
TIMM9P3-201ENST00000428659 KAZNQ674X7 775 aa4.4□□□□□ -1.71
TIMM9P3-201ENST00000428659 PPP4R3AQ6IN85 833 aa4.4□□□□□ -1.71
TIMM9P3-201ENST00000428659 MICALCLQ6ZW33 695 aa4.4□□□□□ -1.71
TIMM9P3-201ENST00000428659 USP37Q86T82 979 aa4.4□□□□□ -1.71
TIMM9P3-201ENST00000428659 MIER2Q8N344 545 aa4.4□□□□□ -1.71
TIMM9P3-201ENST00000428659 PSD4Q8NDX1 1056 aa4.4□□□□□ -1.71
TIMM9P3-201ENST00000428659 ZNF384Q8TF68 577 aa4.4□□□□□ -1.71
TIMM9P3-201ENST00000428659 SCAMP4Q969E2 229 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms