RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 CYP24A1Q07973 514 aa16.04■□□□□ 0.16
RTN4-210ENST00000427710 SNW1Q13573 536 aaKnown RBP16.04■□□□□ 0.16
RTN4-210ENST00000427710 SMYD4Q8IYR2 804 aaPredicted RBP16.04■□□□□ 0.16
RTN4-210ENST00000427710 ENGASEQ8NFI3 743 aa16.04■□□□□ 0.16
RTN4-210ENST00000427710 OR10T2Q8NGX3 314 aa16.04■□□□□ 0.16
RTN4-210ENST00000427710 PLEKHO2Q8TD55 490 aa16.04■□□□□ 0.16
RTN4-210ENST00000427710 CCDC127Q96BQ5 260 aa16.04■□□□□ 0.16
RTN4-210ENST00000427710 ANKRD36BP1Q96IX9 119 aa16.04■□□□□ 0.16
RTN4-210ENST00000427710 RTP3Q9BQQ7 232 aa16.04■□□□□ 0.16
RTN4-210ENST00000427710 LRFN3Q9BTN0 628 aa16.04■□□□□ 0.16
RTN4-210ENST00000427710 KCTD10Q9H3F6 313 aa16.04■□□□□ 0.16
RTN4-210ENST00000427710 INTS13Q9NVM9 706 aa16.04■□□□□ 0.16
RTN4-210ENST00000427710 DNMT3BQ9UBC3 853 aaKnown RBP16.04■□□□□ 0.16
RTN4-210ENST00000427710 MYH10P35580 1976 aa16.04■□□□□ 0.16
RTN4-210ENST00000427710 KPNA7A9QM74 516 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 EXOC3O60645 756 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 RHOBTB3O94955 611 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 PAPLNO95428 1278 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 TNNC2P02585 160 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 MYL1P05976 194 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 HNRNPA1P09651 372 aaKnown RBP eCLIP16.03■□□□□ 0.162e-6■□□□□ 8.1
RTN4-210ENST00000427710 ATF2P15336 505 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 ZXDAP98168 799 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 PTPN21Q16825 1174 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 UVSSAQ2YD98 709 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 SV2CQ496J9 727 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 TMEM31Q5JXX7 168 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 CYP26C1Q6V0L0 522 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 OTOP3Q7RTS5 596 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 ZDHHC14Q8IZN3 488 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 TTC9BQ8N6N2 239 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 ITFG1Q8TB96 612 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 RSAD2Q8WXG1 361 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 CCDC47Q96A33 483 aaKnown RBP16.03■□□□□ 0.16
RTN4-210ENST00000427710 ACSF2Q96CM8 615 aaPredicted RBP16.03■□□□□ 0.16
RTN4-210ENST00000427710 ZNF560Q96MR9 790 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 C1QTNF1Q9BXJ1 281 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 RHOBTB2Q9BYZ6 727 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 CRISPLD1Q9H336 500 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 KIAA1586Q9HCI6 787 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 AFF4Q9UHB7 1163 aaKnown RBP16.03■□□□□ 0.16
RTN4-210ENST00000427710 CIZ1Q9ULV3 898 aaPredicted RBP16.03■□□□□ 0.16
RTN4-210ENST00000427710 USTQ9Y2C2 406 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 INSL5Q9Y5Q6 135 aa16.03■□□□□ 0.16
RTN4-210ENST00000427710 DENND4CQ5VZ89 1909 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 OR6C75A6NL08 312 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 NRG2O14511 850 aaPredicted RBP16.02■□□□□ 0.16
RTN4-210ENST00000427710 HCRTO43612 131 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 XYLBO75191 536 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 SOAT2O75908 522 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 LRG1P02750 347 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 CYP11A1P05108 521 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 TNNI1P19237 187 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 FSHRP23945 695 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 HOXA9P31269 272 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 SNRPFP62306 86 aaKnown RBP16.02■□□□□ 0.16
RTN4-210ENST00000427710 RBP5P82980 135 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 TWF1Q12792 350 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 PSMD6Q15008 389 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 SURF1Q15526 300 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 DUOXA2Q1HG44 320 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 TPGS2Q68CL5 300 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 OSTM1Q86WC4 334 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 METTL23Q86XA0 190 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 C12orf56Q8IXR9 622 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 HS6ST3Q8IZP7 471 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 ING5Q8WYH8 240 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 ZNF516Q92618 1163 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 EDAQ92838 391 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 ELMO3Q96BJ8 720 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 CGRRF1Q99675 332 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 GZF1Q9H116 711 aaPredicted RBP16.02■□□□□ 0.16
RTN4-210ENST00000427710 ITGA11Q9UKX5 1188 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 L1RE1Q9UN81 338 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 SLC27A5Q9Y2P5 690 aa16.02■□□□□ 0.16
RTN4-210ENST00000427710 ZNF318Q5VUA4 2279 aa16.01■□□□□ 0.15
RTN4-210ENST00000427710 ARHGEF37A1IGU5 675 aa16.01■□□□□ 0.15
RTN4-210ENST00000427710 MTMR11A4FU01 709 aa16.01■□□□□ 0.15
RTN4-210ENST00000427710 CST3P01034 146 aaPredicted RBP16.01■□□□□ 0.15
RTN4-210ENST00000427710 NR3C1P04150 777 aa16.01■□□□□ 0.15
RTN4-210ENST00000427710 FAM160A1Q05DH4 1040 aa16.01■□□□□ 0.15
RTN4-210ENST00000427710 DUSP4Q13115 394 aa16.01■□□□□ 0.15
RTN4-210ENST00000427710 SLC39A12Q504Y0 691 aa16.01■□□□□ 0.15
RTN4-210ENST00000427710 TRAPPC11Q7Z392 1133 aa16.01■□□□□ 0.15
RTN4-210ENST00000427710 LRRTM3Q86VH5 581 aa16.01■□□□□ 0.15
RTN4-210ENST00000427710 WDR49Q8IV35 697 aa16.01■□□□□ 0.15
RTN4-210ENST00000427710 TCEAL8Q8IYN2 117 aa16.01■□□□□ 0.15
RTN4-210ENST00000427710 PLCD3Q8N3E9 789 aa16.01■□□□□ 0.15
RTN4-210ENST00000427710 PDCL2Q8N4E4 241 aa16.01■□□□□ 0.15
RTN4-210ENST00000427710 ATAD1Q8NBU5 361 aa16.01■□□□□ 0.15
RTN4-210ENST00000427710 MFSD14AQ96MC6 490 aa16.01■□□□□ 0.15
RTN4-210ENST00000427710 FNBP1Q96RU3 617 aa16.01■□□□□ 0.15
RTN4-210ENST00000427710 CORO1BQ9BR76 489 aa16.01■□□□□ 0.15
RTN4-210ENST00000427710 DMAC2Q9NW81 257 aa16.01■□□□□ 0.15
RTN4-210ENST00000427710 CGNQ9P2M7 1197 aaKnown RBP16.01■□□□□ 0.15
RTN4-210ENST00000427710 SNX9Q9Y5X1 595 aa16.01■□□□□ 0.15
RTN4-210ENST00000427710 PTPRDP23468 1912 aa16.01■□□□□ 0.15
RTN4-210ENST00000427710 GPR37L1O60883 481 aa16■□□□□ 0.15
RTN4-210ENST00000427710 RHOP08100 348 aa16■□□□□ 0.15
RTN4-210ENST00000427710 ACAT1P24752 427 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms