RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 PPM1KQ8N3J5 372 aa16.52■□□□□ 0.24
COL11A1-204ENST00000427239 TTC39CQ8N584 583 aa16.52■□□□□ 0.24
COL11A1-204ENST00000427239 NEK11Q8NG66 645 aa16.52■□□□□ 0.24
COL11A1-204ENST00000427239 SPATA18Q8TC71 538 aa16.52■□□□□ 0.24
COL11A1-204ENST00000427239 TIFAQ96CG3 184 aa16.52■□□□□ 0.24
COL11A1-204ENST00000427239 IQCDQ96DY2 449 aa16.52■□□□□ 0.24
COL11A1-204ENST00000427239 C17orf80Q9BSJ5 609 aa16.52■□□□□ 0.24
COL11A1-204ENST00000427239 NKX2-4Q9H2Z4 354 aa16.52■□□□□ 0.24
COL11A1-204ENST00000427239 PCDHB8Q9UN66 801 aa16.52■□□□□ 0.24
COL11A1-204ENST00000427239 LZTS1Q9Y250 596 aa16.52■□□□□ 0.24
COL11A1-204ENST00000427239 TACC1O75410 805 aa16.51■□□□□ 0.23
COL11A1-204ENST00000427239 CYP11A1P05108 521 aa16.51■□□□□ 0.23
COL11A1-204ENST00000427239 TYMPP19971 482 aa16.51■□□□□ 0.23
COL11A1-204ENST00000427239 MFAP3P55082 362 aa16.51■□□□□ 0.23
COL11A1-204ENST00000427239 UBE3AQ05086 875 aa16.51■□□□□ 0.23
COL11A1-204ENST00000427239 CUL2Q13617 745 aa16.51■□□□□ 0.23
COL11A1-204ENST00000427239 SOWAHAQ2M3V2 549 aa16.51■□□□□ 0.23
COL11A1-204ENST00000427239 USP41Q3LFD5 358 aa16.51■□□□□ 0.23
COL11A1-204ENST00000427239 DPY19L2P1Q6NXN4 242 aa16.51■□□□□ 0.23
COL11A1-204ENST00000427239 BCL7CQ8WUZ0 217 aaPredicted RBP16.51■□□□□ 0.23
COL11A1-204ENST00000427239 NUP58Q9BVL2 599 aa16.51■□□□□ 0.23
COL11A1-204ENST00000427239 LSM14BQ9BX40 385 aaKnown RBP16.51■□□□□ 0.23
COL11A1-204ENST00000427239 BCO2Q9BYV7 579 aa16.51■□□□□ 0.23
COL11A1-204ENST00000427239 SIX2Q9NPC8 291 aa16.51■□□□□ 0.23
COL11A1-204ENST00000427239 UBE2TQ9NPD8 197 aaPredicted RBP16.51■□□□□ 0.23
COL11A1-204ENST00000427239 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.51■□□□□ 0.23
COL11A1-204ENST00000427239 FAM207AQ9NSI2 230 aaPredicted RBP16.51■□□□□ 0.23
COL11A1-204ENST00000427239 ARHGEF15O94989 841 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 SOD2P04179 222 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 UCHL3P15374 230 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 TRIM21P19474 475 aaKnown RBP16.5■□□□□ 0.23
COL11A1-204ENST00000427239 FGFR3P22607 806 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 ASPAP45381 313 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 ZNF75DP51815 510 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 YWHAEP62258 255 aaKnown RBP16.5■□□□□ 0.23
COL11A1-204ENST00000427239 FAM171A1Q5VUB5 890 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 SPECC1LQ69YQ0 1117 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.5■□□□□ 0.23
COL11A1-204ENST00000427239 RRAGAQ7L523 313 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 METTL23Q86XA0 190 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 GPR65Q8IYL9 337 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 RNF168Q8IYW5 571 aaPredicted RBP16.5■□□□□ 0.23
COL11A1-204ENST00000427239 CHST7Q9NS84 486 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 ITIH6Q6UXX5 1313 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 SCN1AP35498 2009 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 H3BNC9 293 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 I3L4J1 428 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 LHX1P48742 406 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 BMS1Q14692 1282 aaKnown RBP16.5■□□□□ 0.23
COL11A1-204ENST00000427239 FIGNQ5HY92 759 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 PDXDC1Q6P996 788 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 FBXO22Q8NEZ5 403 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 ELMO3Q96BJ8 720 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 TTPALQ9BTX7 342 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 EDEM3Q9BZQ6 932 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 DNAJC12Q9UKB3 198 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 MTUS1Q9ULD2 1270 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 L1RE1Q9UN81 338 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 POLIQ9UNA4 740 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.5■□□□□ 0.23
COL11A1-204ENST00000427239 TRANK1O15050 2925 aa16.5■□□□□ 0.23
COL11A1-204ENST00000427239 NOL4O94818 638 aa16.49■□□□□ 0.23
COL11A1-204ENST00000427239 OAZ2O95190 189 aa16.49■□□□□ 0.23
COL11A1-204ENST00000427239 WEE2P0C1S8 567 aa16.49■□□□□ 0.23
COL11A1-204ENST00000427239 KLK7P49862 253 aa16.49■□□□□ 0.23
COL11A1-204ENST00000427239 WSCD1Q658N2 575 aa16.49■□□□□ 0.23
COL11A1-204ENST00000427239 KIAA1841Q6NSI8 718 aa16.49■□□□□ 0.23
COL11A1-204ENST00000427239 VSTM4Q8IW00 320 aa16.49■□□□□ 0.23
COL11A1-204ENST00000427239 ARHGEF19Q8IW93 802 aa16.49■□□□□ 0.23
COL11A1-204ENST00000427239 VPS52Q8N1B4 723 aa16.49■□□□□ 0.23
COL11A1-204ENST00000427239 PDCL2Q8N4E4 241 aa16.49■□□□□ 0.23
COL11A1-204ENST00000427239 NAA15Q9BXJ9 866 aaKnown RBP16.49■□□□□ 0.23
COL11A1-204ENST00000427239 OXCT2Q9BYC2 517 aaPredicted RBP16.49■□□□□ 0.23
COL11A1-204ENST00000427239 DNAI2Q9GZS0 605 aa16.49■□□□□ 0.23
COL11A1-204ENST00000427239 SSX2IPQ9Y2D8 614 aa16.49■□□□□ 0.23
COL11A1-204ENST00000427239 GABRDO14764 452 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 ADCY5O95622 1261 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 WARSP23381 471 aaKnown RBP16.48■□□□□ 0.23
COL11A1-204ENST00000427239 TKTP29401 623 aaKnown RBP16.48■□□□□ 0.23
COL11A1-204ENST00000427239 GNL1P36915 607 aaPredicted RBP16.48■□□□□ 0.23
COL11A1-204ENST00000427239 CDH8P55286 799 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 POLR2FP61218 127 aaKnown RBP16.48■□□□□ 0.23
COL11A1-204ENST00000427239 APBA1Q02410 837 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 YWHAHQ04917 246 aaPredicted RBP16.48■□□□□ 0.23
COL11A1-204ENST00000427239 OVOS1Q6IE37 1185 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 ANKS3Q6ZW76 656 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 TAS1R1Q7RTX1 841 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 CEP57Q86XR8 500 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 ADGRF2Q8IZF7 708 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 THEM5Q8N1Q8 247 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 SPPL3Q8TCT6 385 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 VN1R3Q9BXE9 311 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 STK33Q9BYT3 514 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 GANQ9H2C0 597 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 SNX25Q9H3E2 840 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 ALG13Q9NP73 1137 aaKnown RBP16.48■□□□□ 0.23
COL11A1-204ENST00000427239 CISHQ9NSE2 258 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 CEP72Q9P209 647 aa16.48■□□□□ 0.23
COL11A1-204ENST00000427239 BARX2Q9UMQ3 279 aaPredicted RBP16.48■□□□□ 0.23
COL11A1-204ENST00000427239 TIMM13Q9Y5L4 95 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms