RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 POU5F1Q01860 360 aaKnown RBP6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 PPP3CAQ08209 521 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 GRIK3Q13003 919 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 TUSC3Q13454 348 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 TMEM132DQ14C87 1099 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 IQCB1Q15051 598 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 NR6A1Q15406 480 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 RAB30Q15771 203 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 KYAT1Q16773 422 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 SPOUT1Q5T280 376 aaKnown RBP6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 SPATA1Q5VX52 437 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 KCNT2Q6UVM3 1135 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 TAS1R1Q7RTX1 841 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 FILIP1Q7Z7B0 1213 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 AOPEPQ8N6M6 819 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 C1orf127Q8N9H9 656 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 ENOX1Q8TC92 643 aaKnown RBP6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 PARD3BQ8TEW8 1205 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 HASPINQ8TF76 798 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 CLP1Q92989 425 aaKnown RBP6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 TIFAQ96CG3 184 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 SCARF2Q96GP6 870 aaPredicted RBP6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 CEP63Q96MT8 703 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 RPS6KC1Q96S38 1066 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 CGRRF1Q99675 332 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 MRPL9Q9BYD2 267 aaKnown RBP6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 MTMR12Q9C0I1 747 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 ASB7Q9H672 318 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 KIAA1586Q9HCI6 787 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 INTS13Q9NVM9 706 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 FANCLQ9NW38 375 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 MARCH5Q9NX47 278 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 SIX4Q9UIU6 781 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 MSRAQ9UJ68 235 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 FRMD4BQ9Y2L6 1034 aa6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 DNMT3AQ9Y6K1 912 aaPredicted RBP6.18□□□□□ -1.42
HERPUD2-204ENST00000426180 PODXLO00592 558 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 PIRO00625 290 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 MAPK13O15264 365 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 GRM6O15303 877 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 CSPG5O95196 566 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 KIF4AO95239 1232 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 EFEMP2O95967 443 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 CST3P01034 146 aaPredicted RBP6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 EPB41P11171 864 aaKnown RBP6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 LAG3P18627 525 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 TNNI1P19237 187 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 DNAJB1P25685 340 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 LRPAP1P30533 357 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 CTNNB1P35222 781 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 BRCC3P46736 316 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 GCLMP48507 274 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 VAMP7P51809 220 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 CLDN10P78369 228 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 BFSP1Q12934 665 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 UPP1Q16831 310 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 CCDC40Q4G0X9 1142 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 EPC2Q52LR7 807 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 CT47A1Q5JQC4 288 aaPredicted RBP6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 CDKAL1Q5VV42 579 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 TDRD10Q5VZ19 366 aaKnown RBP6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 C9orf57Q5W0N0 161 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 PPP2R2DQ66LE6 453 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 FOXR2Q6PJQ5 311 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 LRSAM1Q6UWE0 723 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 Q7L0L9 218 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 TRAPPC11Q7Z392 1133 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 FRMD5Q7Z6J6 570 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 LUZP1Q86V48 1076 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 WDR49Q8IV35 697 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 CD302Q8IX05 232 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 SLC39A11Q8N1S5 342 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 KLHL23Q8NBE8 558 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 RNF217Q8TC41 542 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 GDPD5Q8WTR4 605 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 ARNTL2Q8WYA1 636 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 SLC35C1Q96A29 364 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 IGSF21Q96ID5 467 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 B3GALT6Q96L58 329 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 CNOT6LQ96LI5 555 aaKnown RBP6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 FAM161BQ96MY7 647 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 ZNF558Q96NG5 402 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 FAM193BQ96PV7 902 aaPredicted RBP6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 TGS1Q96RS0 853 aaKnown RBP6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 TMEM175Q9BSA9 504 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 MKNK1Q9BUB5 465 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 THAP9Q9H5L6 903 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 MMRN2Q9H8L6 949 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 SLC28A3Q9HAS3 691 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 CBX8Q9HC52 389 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 SLC24A3Q9HC58 644 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 ALG13Q9NP73 1137 aaKnown RBP6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 DPP3Q9NY33 737 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 KANSL3Q9P2N6 904 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 ARMCX3Q9UH62 379 aaPredicted RBP6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 UBQLN1Q9UMX0 589 aaKnown RBP6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 AGAP1Q9UPQ3 857 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 FAN1Q9Y2M0 1017 aa6.17□□□□□ -1.42
HERPUD2-204ENST00000426180 DERAQ9Y315 318 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms