RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 SPDL1Q96EA4 605 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 TRIM6Q9C030 488 aaPredicted RBP7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 KIAA1683Q9H0B3 1180 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 C12orf65Q9H3J6 166 aaKnown RBP7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 SAE1Q9UBE0 346 aaPredicted RBP7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 NKX1-2Q9UD57 310 aaPredicted RBP7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 SYNPO2Q9UMS6 1093 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 PCDHA10Q9Y5I2 948 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 USH1CQ9Y6N9 552 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 IVNS1ABPQ9Y6Y0 642 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 GREB1LQ9C091 1923 aaPredicted RBP7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 LRRD1A4D1F6 860 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 F8VP50 259 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 PSTPIP1O43586 416 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 ZNF862O60290 1169 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 CYP1A1P04798 512 aaPredicted RBP7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 KLRC2P26717 231 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 SLC8A3P57103 927 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 MTERF2Q49AM1 385 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 TDRD10Q5VZ19 366 aaKnown RBP7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 LONP2Q86WA8 852 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 KATNAL2Q8IYT4 538 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 ABRAQ8N0Z2 381 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 EXD1Q8NHP7 514 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 FEZF2Q8TBJ5 459 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 FBXL18Q96ME1 805 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 TMEM121Q9BTD3 319 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 TIPINQ9BVW5 301 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 ANKFY1Q9P2R3 1169 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 KIF13BQ9NQT8 1826 aa7.96□□□□□ -1.14
SMARCC1-202ENST00000425518 DNALI1O14645 258 aaPredicted RBP7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 LIASO43766 372 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 UPP2O95045 317 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 NEFHP12036 1026 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 NOMO3P69849 1222 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 KRT76Q01546 638 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 OVGP1Q12889 678 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 FAM182AQ5T1J6 154 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 LVRNQ6Q4G3 990 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 NIPA1Q7RTP0 329 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 TEX2Q8IWB9 1127 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 RBBP8NLQ8NC74 664 aaPredicted RBP7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 TMEM174Q8WUU8 243 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 TMEM143Q96AN5 459 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 PDCD2LQ9BRP1 358 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 MOV10L1Q9BXT6 1211 aaKnown RBP7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 APOBEC3GQ9HC16 384 aaKnown RBP7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 NPHS2Q9NP85 383 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 GRID1Q9ULK0 1009 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 ATP2A1O14983 1001 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 TJP3O95049 919 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 ASNSP08243 561 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 CCNB1P14635 433 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 KRT4P19013 534 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 GCAP28676 217 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 RAD23BP54727 409 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 LMNB2Q03252 620 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 CUL2Q13617 745 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 TXNRD3NBQ6F5E7 133 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 ZNF677Q86XU0 584 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 POLR3FQ9H1D9 316 aaPredicted RBP7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 SLC5A4Q9NY91 659 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 AGO2Q9UKV8 859 aaKnown RBP7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 STARD13Q9Y3M8 1113 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 ACTL7BQ9Y614 415 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 EXTL3O43909 919 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 EPHB2P29323 1055 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 SSTR1P30872 391 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 SFNP31947 248 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 PEX19P40855 299 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 BAATQ14032 418 aaPredicted RBP7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 ZACNQ401N2 412 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 ZBTB41Q5SVQ8 909 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 SCARA3Q6AZY7 606 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 RCOR2Q8IZ40 523 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 SPIRE2Q8WWL2 714 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 MCEEQ96PE7 176 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 NUDCD1Q96RS6 583 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 SENP7Q9BQF6 1050 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 TBC1D10AQ9BXI6 508 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 MAK16Q9BXY0 300 aaKnown RBP7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 UBN1Q9NPG3 1134 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 PARVAQ9NVD7 372 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 PTPRJQ12913 1337 aa7.95□□□□□ -1.14
SMARCC1-202ENST00000425518 LRRIQ4A6NIV6 560 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 PLA2G6O60733 806 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 PCK1P35558 622 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 GAD2Q05329 585 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 NR1H3Q13133 447 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 EFTUD2Q15029 972 aaKnown RBP eCLIP7.94□□□□□ -1.142e-7■■■■□ 22.1
SMARCC1-202ENST00000425518 TAF1BQ53T94 588 aaPredicted RBP7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 CENPUQ71F23 418 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 MTDHQ86UE4 582 aaKnown RBP7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 RIBC1Q8N443 379 aaPredicted RBP7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 MAB21L3Q8N8X9 362 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 DENND1AQ8TEH3 1009 aa7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 NTPCRQ9BSD7 190 aaKnown RBP7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 RBAKQ9NYW8 714 aaPredicted RBP7.94□□□□□ -1.14
SMARCC1-202ENST00000425518 IP6K2Q9UHH9 426 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms