RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 LRIG1Q96JA1 1093 aa6.43□□□□□ -1.38
LINC01040-201ENST00000425048 NR2E3Q9Y5X4 410 aa6.43□□□□□ -1.38
LINC01040-201ENST00000425048 LINC01548A6NM66 108 aa6.42□□□□□ -1.38
LINC01040-201ENST00000425048 VWC2LB2RUY7 222 aa6.42□□□□□ -1.38
LINC01040-201ENST00000425048 URI1O94763 535 aaPredicted RBP6.42□□□□□ -1.38
LINC01040-201ENST00000425048 MC2RQ01718 297 aa6.42□□□□□ -1.38
LINC01040-201ENST00000425048 TFF2Q03403 129 aa6.42□□□□□ -1.38
LINC01040-201ENST00000425048 RAB24Q969Q5 203 aa6.42□□□□□ -1.38
LINC01040-201ENST00000425048 HDAC10Q969S8 669 aa6.42□□□□□ -1.38
LINC01040-201ENST00000425048 ADGRA2Q96PE1 1338 aa6.42□□□□□ -1.38
LINC01040-201ENST00000425048 F5H697 171 aa6.41□□□□□ -1.38
LINC01040-201ENST00000425048 K7ESF4 209 aa6.41□□□□□ -1.38
LINC01040-201ENST00000425048 SGTAO43765 313 aa6.41□□□□□ -1.38
LINC01040-201ENST00000425048 ANXA1P04083 346 aa6.41□□□□□ -1.38
LINC01040-201ENST00000425048 PRR35P0CG20 571 aa6.41□□□□□ -1.38
LINC01040-201ENST00000425048 NPTX2P47972 431 aa6.41□□□□□ -1.38
LINC01040-201ENST00000425048 ZNF280AP59817 542 aaPredicted RBP6.41□□□□□ -1.38
LINC01040-201ENST00000425048 KLF1Q13351 362 aaPredicted RBP6.41□□□□□ -1.38
LINC01040-201ENST00000425048 CLUL1Q15846 466 aa6.41□□□□□ -1.38
LINC01040-201ENST00000425048 FLYWCH1Q4VC44 716 aa6.41□□□□□ -1.38
LINC01040-201ENST00000425048 C11orf87Q6NUJ2 197 aa6.41□□□□□ -1.38
LINC01040-201ENST00000425048 TMIEQ8NEW7 156 aa6.41□□□□□ -1.38
LINC01040-201ENST00000425048 PBKQ96KB5 322 aa6.41□□□□□ -1.38
LINC01040-201ENST00000425048 TRIB1Q96RU8 372 aa6.41□□□□□ -1.38
LINC01040-201ENST00000425048 SMOQ99835 787 aa6.41□□□□□ -1.38
LINC01040-201ENST00000425048 ALG8Q9BVK2 526 aa6.41□□□□□ -1.38
LINC01040-201ENST00000425048 SEMA4CQ9C0C4 833 aa6.41□□□□□ -1.38
LINC01040-201ENST00000425048 SLC45A2Q9UMX9 530 aa6.41□□□□□ -1.38
LINC01040-201ENST00000425048 SPATA31A3Q5VYP0 1347 aa6.41□□□□□ -1.38
LINC01040-201ENST00000425048 A0A0B4J269 797 aa6.4□□□□□ -1.38
LINC01040-201ENST00000425048 TRIM75PA6NK02 468 aa6.4□□□□□ -1.38
LINC01040-201ENST00000425048 TRIAP1O43715 76 aa6.4□□□□□ -1.38
LINC01040-201ENST00000425048 NR2F6P10588 404 aa6.4□□□□□ -1.38
LINC01040-201ENST00000425048 KELP23276 732 aa6.4□□□□□ -1.38
LINC01040-201ENST00000425048 HSD3B2P26439 372 aa6.4□□□□□ -1.38
LINC01040-201ENST00000425048 PTGER1P34995 402 aa6.4□□□□□ -1.38
LINC01040-201ENST00000425048 TUBB3Q13509 450 aa6.4□□□□□ -1.38
LINC01040-201ENST00000425048 RAB39AQ14964 217 aa6.4□□□□□ -1.38
LINC01040-201ENST00000425048 PLAC9Q5JTB6 97 aa6.4□□□□□ -1.38
LINC01040-201ENST00000425048 TAPT1Q6NXT6 567 aa6.4□□□□□ -1.38
LINC01040-201ENST00000425048 GADL1Q6ZQY3 521 aa6.4□□□□□ -1.38
LINC01040-201ENST00000425048 FAM9AQ8IZU1 332 aaPredicted RBP6.4□□□□□ -1.38
LINC01040-201ENST00000425048 CAMKK1Q8N5S9 505 aa6.4□□□□□ -1.38
LINC01040-201ENST00000425048 COG1Q8WTW3 980 aa6.4□□□□□ -1.38
LINC01040-201ENST00000425048 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.4□□□□□ -1.38
LINC01040-201ENST00000425048 TLDC2A0PJX2 215 aa6.39□□□□□ -1.39
LINC01040-201ENST00000425048 CD1AP06126 327 aa6.39□□□□□ -1.39
LINC01040-201ENST00000425048 HNRNPCP07910 306 aaKnown RBP eCLIP6.39□□□□□ -1.39
LINC01040-201ENST00000425048 CCT8P50990 548 aa6.39□□□□□ -1.39
LINC01040-201ENST00000425048 SLC16A1P53985 500 aa6.39□□□□□ -1.39
LINC01040-201ENST00000425048 TMEM119Q4V9L6 283 aa6.39□□□□□ -1.39
LINC01040-201ENST00000425048 ZNF626Q68DY1 528 aa6.39□□□□□ -1.39
LINC01040-201ENST00000425048 ZNF782Q6ZMW2 699 aaPredicted RBP6.39□□□□□ -1.39
LINC01040-201ENST00000425048 POC1BQ8TC44 478 aa6.39□□□□□ -1.39
LINC01040-201ENST00000425048 RFKQ969G6 155 aa6.39□□□□□ -1.39
LINC01040-201ENST00000425048 CALCOCO1Q9P1Z2 691 aa6.39□□□□□ -1.39
LINC01040-201ENST00000425048 TARM1B6A8C7 271 aa6.38□□□□□ -1.39
LINC01040-201ENST00000425048 NDUFS2O75306 463 aa6.38□□□□□ -1.39
LINC01040-201ENST00000425048 CNGA1P29973 690 aa6.38□□□□□ -1.39
LINC01040-201ENST00000425048 SLC44A4Q53GD3 710 aa6.38□□□□□ -1.39
LINC01040-201ENST00000425048 PPP4R3AQ6IN85 833 aa6.38□□□□□ -1.39
LINC01040-201ENST00000425048 KRT26Q7Z3Y9 468 aa6.38□□□□□ -1.39
LINC01040-201ENST00000425048 RPL36ALQ969Q0 106 aaKnown RBP6.38□□□□□ -1.39
LINC01040-201ENST00000425048 MRGPRX4Q96LA9 322 aa6.38□□□□□ -1.39
LINC01040-201ENST00000425048 FCRL4Q96PJ5 515 aa6.38□□□□□ -1.39
LINC01040-201ENST00000425048 TPSD1Q9BZJ3 242 aa6.38□□□□□ -1.39
LINC01040-201ENST00000425048 BHMT2Q9H2M3 363 aa6.38□□□□□ -1.39
LINC01040-201ENST00000425048 EHD3Q9NZN3 535 aa6.38□□□□□ -1.39
LINC01040-201ENST00000425048 POLRMTO00411 1230 aaKnown RBP6.37□□□□□ -1.39
LINC01040-201ENST00000425048 BMP15O95972 392 aa6.37□□□□□ -1.39
LINC01040-201ENST00000425048 ZFXP17010 805 aaPredicted RBP6.37□□□□□ -1.39
LINC01040-201ENST00000425048 TUBA4AP68366 448 aa6.37□□□□□ -1.39
LINC01040-201ENST00000425048 BMPR2Q13873 1038 aa6.37□□□□□ -1.39
LINC01040-201ENST00000425048 PGM2L1Q6PCE3 622 aa6.37□□□□□ -1.39
LINC01040-201ENST00000425048 SLC30A10Q6XR72 485 aa6.37□□□□□ -1.39
LINC01040-201ENST00000425048 ATL2Q8NHH9 583 aa6.37□□□□□ -1.39
LINC01040-201ENST00000425048 FBXO41Q8TF61 875 aa6.37□□□□□ -1.39
LINC01040-201ENST00000425048 ZBTB9Q96C00 473 aa6.37□□□□□ -1.39
LINC01040-201ENST00000425048 CLPTM1LQ96KA5 538 aa6.37□□□□□ -1.39
LINC01040-201ENST00000425048 OSBPL9Q96SU4 736 aa6.37□□□□□ -1.39
LINC01040-201ENST00000425048 AMBRA1Q9C0C7 1298 aa6.37□□□□□ -1.39
LINC01040-201ENST00000425048 NRIP3Q9NQ35 241 aa6.37□□□□□ -1.39
LINC01040-201ENST00000425048 SERTAD4Q9NUC0 356 aa6.37□□□□□ -1.39
LINC01040-201ENST00000425048 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.37□□□□□ -1.39
LINC01040-201ENST00000425048 BTBD3Q9Y2F9 522 aa6.37□□□□□ -1.39
LINC01040-201ENST00000425048 TP73O15350 636 aa6.36□□□□□ -1.39
LINC01040-201ENST00000425048 LATS1O95835 1130 aa6.36□□□□□ -1.39
LINC01040-201ENST00000425048 RHOP08100 348 aa6.36□□□□□ -1.39
LINC01040-201ENST00000425048 FAM163BP0C2L3 166 aa6.36□□□□□ -1.39
LINC01040-201ENST00000425048 DRD4P21917 467 aa6.36□□□□□ -1.39
LINC01040-201ENST00000425048 CERS1P27544 350 aa6.36□□□□□ -1.39
LINC01040-201ENST00000425048 TLE1Q04724 770 aa6.36□□□□□ -1.39
LINC01040-201ENST00000425048 PDSS2Q86YH6 399 aa6.36□□□□□ -1.39
LINC01040-201ENST00000425048 JADE3Q92613 823 aa6.36□□□□□ -1.39
LINC01040-201ENST00000425048 SCAMP4Q969E2 229 aa6.36□□□□□ -1.39
LINC01040-201ENST00000425048 FKBP10Q96AY3 582 aa6.36□□□□□ -1.39
LINC01040-201ENST00000425048 MAN1C1Q9NR34 630 aa6.36□□□□□ -1.39
LINC01040-201ENST00000425048 TUBD1Q9UJT1 453 aa6.36□□□□□ -1.39
LINC01040-201ENST00000425048 PHLDB1Q86UU1 1377 aa6.35□□□□□ -1.39
LINC01040-201ENST00000425048 E9PLN8 166 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms