RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 LENG1Q96BZ8 264 aaPredicted RBP11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 PTCD3Q96EY7 689 aaKnown RBP11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 INTS2Q9H0H0 1204 aaKnown RBP11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 LIN28AQ9H9Z2 209 aaKnown RBP11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 NDE1Q9NXR1 346 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 CCNL1Q9UK58 526 aaPredicted RBP11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 ZNF652Q9Y2D9 606 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 AK5Q9Y6K8 562 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 RBM47A0AV96 593 aaKnown RBP11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 E5RJQ4 531 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 PLSCR1O15162 318 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 TGFB1I1O43294 461 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 RPS6KA4O75676 772 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 PCSK6P29122 969 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 COG7P83436 770 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 GK3PQ14409 553 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 ZRSR2Q15696 482 aaKnown RBP11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 EDRF1Q3B7T1 1238 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 RGS9BPQ6ZS82 235 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 MAP7D3Q8IWC1 876 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 ZNF653Q96CK0 615 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 EYA3Q99504 573 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 CCDC77Q9BR77 488 aa11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 FHDC1Q9C0D6 1143 aaPredicted RBP11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 DIS3Q9Y2L1 958 aaKnown RBP11.92□□□□□ -0.5
SEC61A1-202ENST00000424880 ARHGAP42A6NI28 874 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 C2CD2LO14523 706 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 TRAFD1O14545 582 aaPredicted RBP11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 ITIH2P19823 946 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 GCLMP48507 274 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 EPHB1P54762 984 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 SLC12A3P55017 1021 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 PRR16Q569H4 304 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 TREML1Q86YW5 311 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 SLC35B4Q969S0 331 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 ACSF2Q96CM8 615 aaPredicted RBP11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 SH2D3AQ9BRG2 576 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 TUT1Q9H6E5 874 aaKnown RBP11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 USTQ9Y2C2 406 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 WDR37Q9Y2I8 494 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 ZNF831Q5JPB2 1677 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 CCDC195A0A1B0GUA6 201 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 DCAF8L1A6NGE4 600 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 PI4K2BG5E9Z4 385 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 CHMP2AO43633 222 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 PPP1R11O60927 126 aaPredicted RBP11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 SSTR1P30872 391 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 PEX6Q13608 980 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 CCDC62Q6P9F0 684 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 FOXR2Q6PJQ5 311 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 ANKS1BQ7Z6G8 1248 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 ST13P4Q8IZP2 240 aaPredicted RBP11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 MYCT1Q8N699 235 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 CELF1Q92879 486 aaKnown RBP11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 ARHGEF1Q92888 912 aaKnown RBP11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 NR1H4Q96RI1 486 aaPredicted RBP11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 GRIP2Q9C0E4 1043 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 LRRC27Q9C0I9 530 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 TLE6Q9H808 572 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 METTL14Q9HCE5 456 aaKnown RBP11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 ANKFY1Q9P2R3 1169 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 NARFQ9UHQ1 456 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 UMODL1Q5DID0 1318 aa11.91□□□□□ -0.5
SEC61A1-202ENST00000424880 UTRNP46939 3433 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 CALUO43852 315 aaPredicted RBP11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 FOXD2O60548 495 aaPredicted RBP11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 DNAJC6O75061 913 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 PDE5AO76074 875 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 IFNB1P01574 187 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 TROVE2P10155 538 aaKnown RBP eCLIP11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 RALAP11233 206 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 BMP3P12645 472 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 CD58P19256 250 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 PEX2P28328 305 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 PDIA2Q13087 525 aaKnown RBP11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 CBX3Q13185 183 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 ALCAMQ13740 583 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 KCTD21Q4G0X4 260 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 RC3H1Q5TC82 1133 aaKnown RBP11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 KRT27Q7Z3Y8 459 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 CYP2W1Q8TAV3 490 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 SLC26A7Q8TE54 656 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 GCNAQ96QF7 691 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 MECRQ9BV79 373 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 KLHL4Q9C0H6 718 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 STK32BQ9NY57 414 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 WHRNQ9P202 907 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 APEX2Q9UBZ4 518 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 SLC7A8Q9UHI5 535 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 APPL1Q9UKG1 709 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 COL24A1Q17RW2 1714 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 DOCK2Q92608 1830 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 MIF4GDA9UHW6 222 aaKnown RBP11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 FCHO1O14526 889 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 GAS8O95995 478 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 KRT10P13645 584 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 BGNP21810 368 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 EIF4BP23588 611 aaKnown RBP11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 ALDH18A1P54886 795 aaKnown RBP11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 ARL4CP56559 192 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms