RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 DYMQ7RTS9 669 aa14.09□□□□□ -0.15
VRK3-203ENST00000424804 ZBTB44Q8NCP5 570 aa14.09□□□□□ -0.15
VRK3-203ENST00000424804 APPL2Q8NEU8 664 aa14.09□□□□□ -0.15
VRK3-203ENST00000424804 SHKBP1Q8TBC3 707 aa14.09□□□□□ -0.15
VRK3-203ENST00000424804 DNASE1L2Q92874 299 aa14.09□□□□□ -0.15
VRK3-203ENST00000424804 KIF12Q96FN5 646 aa14.09□□□□□ -0.15
VRK3-203ENST00000424804 TMEM209Q96SK2 561 aa14.09□□□□□ -0.15
VRK3-203ENST00000424804 MKNK1Q9BUB5 465 aa14.09□□□□□ -0.15
VRK3-203ENST00000424804 IKZF4Q9H2S9 585 aa14.09□□□□□ -0.15
VRK3-203ENST00000424804 LARSQ9P2J5 1176 aaKnown RBP14.09□□□□□ -0.15
VRK3-203ENST00000424804 CPSF3Q9UKF6 684 aaKnown RBP14.09□□□□□ -0.15
VRK3-203ENST00000424804 UBQLN1Q9UMX0 589 aaKnown RBP14.09□□□□□ -0.15
VRK3-203ENST00000424804 ANO9A1A5B4 782 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 TISP43B9A030 160 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 K7ENM7 598 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 ZNF197O14709 1029 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 OGTO15294 1046 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 LILRB5O75023 590 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 NMT1P30419 496 aaKnown RBP14.08□□□□□ -0.16
VRK3-203ENST00000424804 DDIT3P35638 169 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 ID4P47928 161 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 ME1P48163 572 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 LILRA4P59901 499 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 GTF2BQ00403 316 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 GPR17Q13304 367 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 WDR44Q5JSH3 913 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 CENPPQ6IPU0 288 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 CCDC73Q6ZRK6 1079 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 PDZD4Q76G19 769 aaPredicted RBP14.08□□□□□ -0.16
VRK3-203ENST00000424804 TTC9BQ8N6N2 239 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 SMARCD2Q92925 531 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 RMDN1Q96DB5 314 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 BICD1Q96G01 975 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 LRRC3BQ96PB8 259 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 NELL2Q99435 816 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 STRA6Q9BX79 667 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 BCO2Q9BYV7 579 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 ZFP14Q9HCL3 533 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 ZNF334Q9HCZ1 680 aaPredicted RBP14.08□□□□□ -0.16
VRK3-203ENST00000424804 TRPV5Q9NQA5 729 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 STK17AQ9UEE5 414 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 YIPF1Q9Y548 306 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 STYXL1Q9Y6J8 313 aa14.08□□□□□ -0.16
VRK3-203ENST00000424804 PIRO00625 290 aa14.07□□□□□ -0.16
VRK3-203ENST00000424804 CUTAO60888 179 aa14.07□□□□□ -0.16
VRK3-203ENST00000424804 PPP6R2O75170 966 aa14.07□□□□□ -0.16
VRK3-203ENST00000424804 YEATS4O95619 227 aa14.07□□□□□ -0.16
VRK3-203ENST00000424804 TYMPP19971 482 aa14.07□□□□□ -0.16
VRK3-203ENST00000424804 MAGEA9P43362 315 aa14.07□□□□□ -0.16
VRK3-203ENST00000424804 YWHAHQ04917 246 aaPredicted RBP14.07□□□□□ -0.16
VRK3-203ENST00000424804 CSTF1Q05048 431 aaKnown RBP14.07□□□□□ -0.16
VRK3-203ENST00000424804 DUSP4Q13115 394 aa14.07□□□□□ -0.16
VRK3-203ENST00000424804 TEAD2Q15562 447 aa14.07□□□□□ -0.16
VRK3-203ENST00000424804 JADE1Q6IE81 842 aa14.07□□□□□ -0.16
VRK3-203ENST00000424804 CRELD2Q6UXH1 353 aaPredicted RBP14.07□□□□□ -0.16
VRK3-203ENST00000424804 MAMSTRQ6ZN01 415 aa14.07□□□□□ -0.16
VRK3-203ENST00000424804 SV2BQ7L1I2 683 aa14.07□□□□□ -0.16
VRK3-203ENST00000424804 KCNG4Q8TDN1 519 aa14.07□□□□□ -0.16
VRK3-203ENST00000424804 BORCS6Q96GS4 357 aa14.07□□□□□ -0.16
VRK3-203ENST00000424804 CHAMP1Q96JM3 812 aa14.07□□□□□ -0.16
VRK3-203ENST00000424804 SENP8Q96LD8 212 aa14.07□□□□□ -0.16
VRK3-203ENST00000424804 ZNF512Q96ME7 567 aaPredicted RBP14.07□□□□□ -0.16
VRK3-203ENST00000424804 PGLYRP2Q96PD5 576 aa14.07□□□□□ -0.16
VRK3-203ENST00000424804 PARVGQ9HBI0 331 aa14.07□□□□□ -0.16
VRK3-203ENST00000424804 PRMT8Q9NR22 394 aaPredicted RBP14.07□□□□□ -0.16
VRK3-203ENST00000424804 SPATA6Q9NWH7 488 aaPredicted RBP14.07□□□□□ -0.16
VRK3-203ENST00000424804 CFAP45Q9UL16 551 aa14.07□□□□□ -0.16
VRK3-203ENST00000424804 TCHHQ07283 1943 aa14.07□□□□□ -0.16
VRK3-203ENST00000424804 DENND4CQ5VZ89 1909 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.06□□□□□ -0.16
VRK3-203ENST00000424804 MTMR11A4FU01 709 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 OR6C75A6NL08 312 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 H0YCG3 227 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 LAMTOR5O43504 91 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 TRAK2O60296 914 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 CYP11A1P05108 521 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 NFICP08651 508 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 MYL4P12829 197 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 IDEP14735 1019 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 CPB1P15086 417 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 PSMC3P17980 439 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 LIG4P49917 911 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 FOXK2Q01167 660 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 MTAPQ13126 283 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 GAS6Q14393 721 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 ZC2HC1CQ53FD0 456 aaPredicted RBP14.06□□□□□ -0.16
VRK3-203ENST00000424804 STXBP5Q5T5C0 1151 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 CYP4A22Q5TCH4 519 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 C9orf57Q5W0N0 161 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 SCARA3Q6AZY7 606 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 TSSK4Q6SA08 328 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 ZNF852Q6ZMS4 543 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 GAREM2Q75VX8 874 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 MFSD6LQ8IWD5 586 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 ATAD1Q8NBU5 361 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 OR10T2Q8NGX3 314 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 ZSCAN18Q8TBC5 510 aaPredicted RBP14.06□□□□□ -0.16
VRK3-203ENST00000424804 DHX58Q96C10 678 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 TSPAN18Q96SJ8 248 aa14.06□□□□□ -0.16
VRK3-203ENST00000424804 TRMT61BQ9BVS5 477 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms