RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 DNPEPQ9ULA0 475 aa22.48■■□□□ 1.19
USP48-205ENST00000421625 ACSBG2Q5FVE4 666 aa22.48■■□□□ 1.19
USP48-205ENST00000421625 FYB2Q5VWT5 728 aa22.48■■□□□ 1.19
USP48-205ENST00000421625 IRGCQ6NXR0 463 aa22.48■■□□□ 1.19
USP48-205ENST00000421625 SCG3Q8WXD2 468 aaKnown RBP22.48■■□□□ 1.19
USP48-205ENST00000421625 PRR11Q96HE9 360 aaPredicted RBP22.48■■□□□ 1.19
USP48-205ENST00000421625 AVENQ9NQS1 362 aaPredicted RBP22.48■■□□□ 1.19
USP48-205ENST00000421625 SAR1AQ9NR31 198 aa22.48■■□□□ 1.19
USP48-205ENST00000421625 RAB20Q9NX57 234 aa22.48■■□□□ 1.19
USP48-205ENST00000421625 RPL26L1Q9UNX3 145 aaKnown RBP22.48■■□□□ 1.19
USP48-205ENST00000421625 MYPNQ86TC9 1320 aa22.47■■□□□ 1.19
USP48-205ENST00000421625 CFAP69A5D8W1 941 aa22.47■■□□□ 1.19
USP48-205ENST00000421625 PI4K2BG5E9Z4 385 aa22.47■■□□□ 1.19
USP48-205ENST00000421625 KRT10P13645 584 aa22.47■■□□□ 1.19
USP48-205ENST00000421625 EFTUD2Q15029 972 aaKnown RBP eCLIP22.47■■□□□ 1.191e-7■■□□□ 12.6
USP48-205ENST00000421625 ABCB5Q2M3G0 1257 aa22.47■■□□□ 1.19
USP48-205ENST00000421625 PPP1R15BQ5SWA1 713 aa22.47■■□□□ 1.19
USP48-205ENST00000421625 TMEM174Q8WUU8 243 aa22.47■■□□□ 1.19
USP48-205ENST00000421625 QSER1Q2KHR3 1735 aa22.47■■□□□ 1.19
USP48-205ENST00000421625 POLR2MP0CAP2 368 aa22.47■■□□□ 1.19
USP48-205ENST00000421625 SSTR3P32745 418 aaPredicted RBP22.47■■□□□ 1.19
USP48-205ENST00000421625 NOP14P78316 857 aaKnown RBP22.47■■□□□ 1.19
USP48-205ENST00000421625 ROR2Q01974 943 aaKnown RBP22.47■■□□□ 1.19
USP48-205ENST00000421625 SPDYAQ5MJ70 313 aa22.47■■□□□ 1.19
USP48-205ENST00000421625 HHIPL2Q6UWX4 724 aa22.47■■□□□ 1.19
USP48-205ENST00000421625 MFN1Q8IWA4 741 aa22.47■■□□□ 1.19
USP48-205ENST00000421625 FBXL13Q8NEE6 735 aa22.47■■□□□ 1.19
USP48-205ENST00000421625 TMEM8AQ9HCN3 771 aa22.47■■□□□ 1.19
USP48-205ENST00000421625 SENP1Q9P0U3 644 aa22.47■■□□□ 1.19
USP48-205ENST00000421625 CPSF2Q9P2I0 782 aaKnown RBP22.47■■□□□ 1.19
USP48-205ENST00000421625 PI4KBQ9UBF8 816 aa22.47■■□□□ 1.19
USP48-205ENST00000421625 FAM198AQ9UFP1 575 aa22.47■■□□□ 1.19
USP48-205ENST00000421625 ZBTB21Q9ULJ3 1066 aa22.47■■□□□ 1.19
USP48-205ENST00000421625 COQ4Q9Y3A0 265 aa22.47■■□□□ 1.19
USP48-205ENST00000421625 CNGA1P29973 690 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 PIK3CAP42336 1068 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 CRKP46108 304 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 PEX3P56589 373 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 GTF2BQ00403 316 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 ALCAMQ13740 583 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 ATP13A4Q4VNC1 1196 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 ANKMY2Q8IV38 441 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 RHOT1Q8IXI2 618 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 DTX3LQ8TDB6 740 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 TTC25Q96NG3 672 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 A0A0G2JND7 137 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 ATP9AO75110 1047 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 ARSEP51690 589 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 PTP4A2Q12974 167 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 GPS1Q13098 491 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 FOXB2Q5VYV0 432 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 TATDN1Q6P1N9 297 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 SAMD1Q6SPF0 538 aaPredicted RBP22.46■■□□□ 1.19
USP48-205ENST00000421625 GALNT15Q8N3T1 639 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 BTBD10Q9BSF8 475 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 FOXP3Q9BZS1 431 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 ALG13Q9NP73 1137 aaKnown RBP22.46■■□□□ 1.19
USP48-205ENST00000421625 ZNF148Q9UQR1 794 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 LRCH1Q9Y2L9 728 aa22.46■■□□□ 1.19
USP48-205ENST00000421625 PTCD3Q96EY7 689 aaKnown RBP22.45■■□□□ 1.18
USP48-205ENST00000421625 KIFC3Q9BVG8 833 aa22.45■■□□□ 1.18
USP48-205ENST00000421625 KCNQ5Q9NR82 932 aa22.45■■□□□ 1.18
USP48-205ENST00000421625 ANKFY1Q9P2R3 1169 aa22.45■■□□□ 1.18
USP48-205ENST00000421625 PSMC3IPQ9P2W1 217 aaPredicted RBP22.45■■□□□ 1.18
USP48-205ENST00000421625 HEY2Q9UBP5 337 aa22.45■■□□□ 1.18
USP48-205ENST00000421625 CAPN9O14815 690 aa22.45■■□□□ 1.18
USP48-205ENST00000421625 GSC2O15499 205 aa22.45■■□□□ 1.18
USP48-205ENST00000421625 PSTPIP1O43586 416 aa22.45■■□□□ 1.18
USP48-205ENST00000421625 LIASO43766 372 aa22.45■■□□□ 1.18
USP48-205ENST00000421625 GH2P01242 217 aa22.45■■□□□ 1.18
USP48-205ENST00000421625 CFHP08603 1231 aa22.45■■□□□ 1.18
USP48-205ENST00000421625 MAPTP10636 758 aaKnown RBP22.45■■□□□ 1.18
USP48-205ENST00000421625 RXRBP28702 533 aa22.45■■□□□ 1.18
USP48-205ENST00000421625 RARRES1P49788 294 aa22.45■■□□□ 1.18
USP48-205ENST00000421625 MIER3Q7Z3K6 550 aa22.45■■□□□ 1.18
USP48-205ENST00000421625 ZC3H18Q86VM9 953 aaKnown RBP22.45■■□□□ 1.18
USP48-205ENST00000421625 KATNAL2Q8IYT4 538 aa22.45■■□□□ 1.18
USP48-205ENST00000421625 IFT43Q96FT9 208 aa22.45■■□□□ 1.18
USP48-205ENST00000421625 C11orf70Q9BRQ4 267 aa22.45■■□□□ 1.18
USP48-205ENST00000421625 VCXQ9H320 206 aa22.45■■□□□ 1.18
USP48-205ENST00000421625 WDR35Q9P2L0 1181 aa22.45■■□□□ 1.18
USP48-205ENST00000421625 ZHX2Q9Y6X8 837 aa22.45■■□□□ 1.18
USP48-205ENST00000421625 GOLGA8SH3BPF8 625 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 GOLGA8MH3BSY2 632 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 IRF6O14896 467 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 CCDC22O60826 627 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 HAUS5O94927 633 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 TROVE2P10155 538 aaKnown RBP eCLIP22.44■■□□□ 1.18
USP48-205ENST00000421625 PASD1Q8IV76 773 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 LARGE2Q8N3Y3 721 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 WDR60Q8WVS4 1066 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 POMGNT1Q8WZA1 660 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 FAM81BQ96LP2 452 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 GOLGA8RI6L899 631 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 TBX10O75333 385 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 MMP10P09238 476 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 VIL1P09327 827 aaKnown RBP22.44■■□□□ 1.18
USP48-205ENST00000421625 NSFP46459 744 aaKnown RBP22.44■■□□□ 1.18
USP48-205ENST00000421625 LMNB2Q03252 620 aa22.44■■□□□ 1.18
USP48-205ENST00000421625 CCDC142Q17RM4 750 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms