RNA–Protein interactions for RNA: ENST00000418897.5

DDX39B-204, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-204ENST00000418897 TPSD1Q9BZJ3 242 aa13.14□□□□□ -0.31
DDX39B-204ENST00000418897 PRORYQ9H606 182 aa13.14□□□□□ -0.31
DDX39B-204ENST00000418897 PLXNB3Q9ULL4 1909 aa13.13□□□□□ -0.31
DDX39B-204ENST00000418897 TRABD2BA6NFA1 517 aa13.13□□□□□ -0.31
DDX39B-204ENST00000418897 PRPF3O43395 683 aaKnown RBP13.13□□□□□ -0.31
DDX39B-204ENST00000418897 SH3BP5O60239 455 aa13.13□□□□□ -0.31
DDX39B-204ENST00000418897 VNN2O95498 520 aa13.13□□□□□ -0.31
DDX39B-204ENST00000418897 CD59P13987 128 aa13.13□□□□□ -0.31
DDX39B-204ENST00000418897 GALK1P51570 392 aa13.13□□□□□ -0.31
DDX39B-204ENST00000418897 SOX4Q06945 474 aaPredicted RBP13.13□□□□□ -0.31
DDX39B-204ENST00000418897 NECTIN1Q15223 517 aa13.13□□□□□ -0.31
DDX39B-204ENST00000418897 DUOXA1Q1HG43 343 aa13.13□□□□□ -0.31
DDX39B-204ENST00000418897 GLRA4Q5JXX5 417 aa13.13□□□□□ -0.31
DDX39B-204ENST00000418897 CREB3L3Q68CJ9 461 aa13.13□□□□□ -0.31
DDX39B-204ENST00000418897 LMBRD2Q68DH5 695 aaPredicted RBP13.13□□□□□ -0.31
DDX39B-204ENST00000418897 RNF19BQ6ZMZ0 732 aa13.13□□□□□ -0.31
DDX39B-204ENST00000418897 GAREM2Q75VX8 874 aa13.13□□□□□ -0.31
DDX39B-204ENST00000418897 DAGLBQ8NCG7 672 aa13.13□□□□□ -0.31
DDX39B-204ENST00000418897 CCDC26Q8TAB7 109 aa13.13□□□□□ -0.31
DDX39B-204ENST00000418897 CCDC12Q8WUD4 166 aaPredicted RBP13.13□□□□□ -0.31
DDX39B-204ENST00000418897 EZH1Q92800 747 aaPredicted RBP13.13□□□□□ -0.31
DDX39B-204ENST00000418897 LSG1Q9H089 658 aaKnown RBP13.13□□□□□ -0.31
DDX39B-204ENST00000418897 DNAJC25Q9H1X3 360 aa13.13□□□□□ -0.31
DDX39B-204ENST00000418897 RWDD1Q9H446 243 aaPredicted RBP13.13□□□□□ -0.31
DDX39B-204ENST00000418897 PDZD7Q9H5P4 517 aa13.13□□□□□ -0.31
DDX39B-204ENST00000418897 GKN1Q9NS71 199 aa13.13□□□□□ -0.31
DDX39B-204ENST00000418897 TMEM74BQ9NUR3 256 aa13.13□□□□□ -0.31
DDX39B-204ENST00000418897 KIAA1522Q9P206 1035 aaPredicted RBP13.13□□□□□ -0.31
DDX39B-204ENST00000418897 MAFFQ9ULX9 164 aa13.13□□□□□ -0.31
DDX39B-204ENST00000418897 KLF18A0A0U1RQI7 1052 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 H7C4K7 107 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 SLC37A4O43826 429 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 PRAMEF12O95522 483 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 EDN1P05305 212 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 U2AF2P26368 475 aaKnown RBP eCLIP13.12□□□□□ -0.312e-13■■■□□ 16.4
DDX39B-204ENST00000418897 HOXD12P35452 270 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 PPP2R5CQ13362 524 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 RUNX3Q13761 415 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 CTTNQ14247 550 aaKnown RBP13.12□□□□□ -0.31
DDX39B-204ENST00000418897 SPDYCQ5MJ68 293 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 OTUD6AQ7L8S5 288 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 TMPRSS7Q7RTY8 843 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 RABEPKQ7Z6M1 372 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 MINDY1Q8N5J2 469 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 BICD2Q8TD16 824 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 CAMK1GQ96NX5 476 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 FAM83CQ9BQN1 747 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 LXNQ9BS40 222 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 CRISPLD1Q9H336 500 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 FZD8Q9H461 694 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 HPS4Q9NQG7 708 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 FSCN3Q9NQT6 498 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 VPS54Q9P1Q0 977 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 AFF4Q9UHB7 1163 aaKnown RBP13.12□□□□□ -0.31
DDX39B-204ENST00000418897 GDAQ9Y2T3 454 aa13.12□□□□□ -0.31
DDX39B-204ENST00000418897 SHROOM3Q8TF72 1996 aa13.11□□□□□ -0.31
DDX39B-204ENST00000418897 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.11□□□□□ -0.31
DDX39B-204ENST00000418897 TEX51A0A1B0GUA7 166 aa13.11□□□□□ -0.31
DDX39B-204ENST00000418897 ANTXRLA6NF34 631 aa13.11□□□□□ -0.31
DDX39B-204ENST00000418897 DKC1O60832 514 aaKnown RBP eCLIP13.11□□□□□ -0.31
DDX39B-204ENST00000418897 WISP1O95388 367 aa13.11□□□□□ -0.31
DDX39B-204ENST00000418897 SYPP08247 313 aa13.11□□□□□ -0.31
DDX39B-204ENST00000418897 SERPINF2P08697 491 aa13.11□□□□□ -0.31
DDX39B-204ENST00000418897 PI4KAP42356 2102 aa13.11□□□□□ -0.31
DDX39B-204ENST00000418897 PSMD2Q13200 908 aa13.11□□□□□ -0.31
DDX39B-204ENST00000418897 LYSMD4Q5XG99 296 aa13.11□□□□□ -0.31
DDX39B-204ENST00000418897 EEF1DP3Q658K8 133 aa13.11□□□□□ -0.31
DDX39B-204ENST00000418897 PPP4R3CPQ6ZMV5 832 aa13.11□□□□□ -0.31
DDX39B-204ENST00000418897 ARMCX6Q7L4S7 300 aa13.11□□□□□ -0.31
DDX39B-204ENST00000418897 DYDC2Q96IM9 177 aa13.11□□□□□ -0.31
DDX39B-204ENST00000418897 SPACA7Q96KW9 195 aa13.11□□□□□ -0.31
DDX39B-204ENST00000418897 FCRL3Q96P31 734 aaPredicted RBP13.11□□□□□ -0.31
DDX39B-204ENST00000418897 P2RY13Q9BPV8 354 aa13.11□□□□□ -0.31
DDX39B-204ENST00000418897 SMG9Q9H0W8 520 aaKnown RBP13.11□□□□□ -0.31
DDX39B-204ENST00000418897 SLKQ9H2G2 1235 aaPredicted RBP13.11□□□□□ -0.31
DDX39B-204ENST00000418897 DNAAF2Q9NVR5 837 aaKnown RBP13.11□□□□□ -0.31
DDX39B-204ENST00000418897 CIZ1Q9ULV3 898 aaPredicted RBP13.11□□□□□ -0.31
DDX39B-204ENST00000418897 A0A087WWV3 80 aa13.1□□□□□ -0.31
DDX39B-204ENST00000418897 ARHGAP33O14559 1287 aa13.1□□□□□ -0.31
DDX39B-204ENST00000418897 SLITRK3O94933 977 aa13.1□□□□□ -0.31
DDX39B-204ENST00000418897 PTGER3P43115 390 aa13.1□□□□□ -0.31
DDX39B-204ENST00000418897 MCM2P49736 904 aa13.1□□□□□ -0.31
DDX39B-204ENST00000418897 BYSLQ13895 437 aaKnown RBP13.1□□□□□ -0.31
DDX39B-204ENST00000418897 EPHA7Q15375 998 aa13.1□□□□□ -0.31
DDX39B-204ENST00000418897 CTXN3Q4LDR2 81 aa13.1□□□□□ -0.31
DDX39B-204ENST00000418897 ARHGAP15Q53QZ3 475 aa13.1□□□□□ -0.31
DDX39B-204ENST00000418897 TRIM68Q6AZZ1 485 aa13.1□□□□□ -0.31
DDX39B-204ENST00000418897 ANO7Q6IWH7 933 aa13.1□□□□□ -0.31
DDX39B-204ENST00000418897 GPR155Q7Z3F1 870 aa13.1□□□□□ -0.31
DDX39B-204ENST00000418897 RASSF3Q86WH2 238 aa13.1□□□□□ -0.31
DDX39B-204ENST00000418897 GALNT15Q8N3T1 639 aa13.1□□□□□ -0.31
DDX39B-204ENST00000418897 PDCD7Q8N8D1 485 aaKnown RBP13.1□□□□□ -0.31
DDX39B-204ENST00000418897 CNOT6LQ96LI5 555 aaKnown RBP13.1□□□□□ -0.31
DDX39B-204ENST00000418897 POLR3CQ9BUI4 534 aaPredicted RBP13.1□□□□□ -0.31
DDX39B-204ENST00000418897 PILRBQ9UKJ0 227 aa13.1□□□□□ -0.31
DDX39B-204ENST00000418897 YIPF1Q9Y548 306 aa13.1□□□□□ -0.31
DDX39B-204ENST00000418897 TRIP11Q15643 1979 aa13.1□□□□□ -0.31
DDX39B-204ENST00000418897 SMIM28A0A1B0GU29 152 aa13.09□□□□□ -0.31
DDX39B-204ENST00000418897 M0R2N6 131 aa13.09□□□□□ -0.31
DDX39B-204ENST00000418897 RRP8O43159 456 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms