RNA–Protein interactions for RNA: ENST00000418511.6

TMEM253-201, Transcript of transmembrane protein 253, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TMEM253, Length 1,526 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-201ENST00000418511 PCDHB8Q9UN66 801 aa13.2□□□□□ -0.3
TMEM253-201ENST00000418511 POLIQ9UNA4 740 aa13.2□□□□□ -0.3
TMEM253-201ENST00000418511 SNX9Q9Y5X1 595 aa13.2□□□□□ -0.3
TMEM253-201ENST00000418511 LILRB3O75022 631 aa13.19□□□□□ -0.3
TMEM253-201ENST00000418511 AFPP02771 609 aaKnown RBP13.19□□□□□ -0.3
TMEM253-201ENST00000418511 ATP1A3P13637 1013 aa13.19□□□□□ -0.3
TMEM253-201ENST00000418511 FOSL2P15408 326 aa13.19□□□□□ -0.3
TMEM253-201ENST00000418511 ZNF18P17022 549 aa13.19□□□□□ -0.3
TMEM253-201ENST00000418511 WDR72Q3MJ13 1102 aa13.19□□□□□ -0.3
TMEM253-201ENST00000418511 VARS2Q5ST30 1063 aaKnown RBP13.19□□□□□ -0.3
TMEM253-201ENST00000418511 WSCD1Q658N2 575 aa13.19□□□□□ -0.3
TMEM253-201ENST00000418511 RBM23Q86U06 439 aaKnown RBP13.19□□□□□ -0.3
TMEM253-201ENST00000418511 GLYCTKQ8IVS8 523 aa13.19□□□□□ -0.3
TMEM253-201ENST00000418511 FBXL13Q8NEE6 735 aa13.19□□□□□ -0.3
TMEM253-201ENST00000418511 LNX1Q8TBB1 728 aaPredicted RBP13.19□□□□□ -0.3
TMEM253-201ENST00000418511 TUBGCP2Q9BSJ2 902 aa13.19□□□□□ -0.3
TMEM253-201ENST00000418511 TSPY26PQ9H489 355 aa13.19□□□□□ -0.3
TMEM253-201ENST00000418511 APOBEC3GQ9HC16 384 aaKnown RBP13.19□□□□□ -0.3
TMEM253-201ENST00000418511 MRPL17Q9NRX2 175 aaKnown RBP13.19□□□□□ -0.3
TMEM253-201ENST00000418511 NXF1Q9UBU9 619 aaKnown RBP13.19□□□□□ -0.3
TMEM253-201ENST00000418511 L1RE1Q9UN81 338 aa13.19□□□□□ -0.3
TMEM253-201ENST00000418511 MTCL1Q9Y4B5 1905 aaKnown RBP13.19□□□□□ -0.3
TMEM253-201ENST00000418511 SYN3O14994 580 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 PER2O15055 1255 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 ADAM12O43184 909 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 HCRTO43612 131 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 ASS1P00966 412 aaKnown RBP13.18□□□□□ -0.3
TMEM253-201ENST00000418511 ODC1P11926 461 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 EEF1GP26641 437 aaKnown RBP13.18□□□□□ -0.3
TMEM253-201ENST00000418511 ATICP31939 592 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 GTF2F1P35269 517 aaKnown RBP eCLIP13.18□□□□□ -0.3
TMEM253-201ENST00000418511 RAP1GAPP47736 663 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 ZNF445P59923 1031 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 NOP14P78316 857 aaKnown RBP13.18□□□□□ -0.3
TMEM253-201ENST00000418511 KRT31Q15323 416 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 PSMD5Q16401 504 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 MAN2A1Q16706 1144 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 TCEAL5Q5H9L2 206 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 MIIPQ5JXC2 388 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 RSPO2Q6UXX9 243 aaPredicted RBP13.18□□□□□ -0.3
TMEM253-201ENST00000418511 SCARA5Q6ZMJ2 495 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 PDCL2Q8N4E4 241 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 MRPL43Q8N983 215 aaKnown RBP13.18□□□□□ -0.3
TMEM253-201ENST00000418511 MAFAQ8NHW3 353 aaPredicted RBP13.18□□□□□ -0.3
TMEM253-201ENST00000418511 PIK3R5Q8WYR1 880 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 NGRNQ9NPE2 291 aaKnown RBP13.18□□□□□ -0.3
TMEM253-201ENST00000418511 RAB20Q9NX57 234 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 GDAP2Q9NXN4 497 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 COQ4Q9Y3A0 265 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 SMTNL1A8MU46 457 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 BECN2A8MW95 431 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 PES1O00541 588 aaKnown RBP13.18□□□□□ -0.3
TMEM253-201ENST00000418511 HUS1O60921 280 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 STAU1O95793 577 aaKnown RBP13.18□□□□□ -0.3
TMEM253-201ENST00000418511 CNPP09543 421 aaKnown RBP13.18□□□□□ -0.3
TMEM253-201ENST00000418511 POU3F3P20264 500 aaPredicted RBP13.18□□□□□ -0.3
TMEM253-201ENST00000418511 TNNC1P63316 161 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 RBM10P98175 930 aaKnown RBP13.18□□□□□ -0.3
TMEM253-201ENST00000418511 YWHAHQ04917 246 aaPredicted RBP13.18□□□□□ -0.3
TMEM253-201ENST00000418511 SOWAHAQ2M3V2 549 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 SGSM1Q2NKQ1 1148 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 ZNF667Q5HYK9 610 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 OSTM1Q86WC4 334 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 APPL2Q8NEU8 664 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 FAM200AQ8TCP9 573 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 MMS19Q96T76 1030 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 CRACR2AQ9BSW2 395 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 VPS16Q9H269 839 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 NSUN3Q9H649 340 aaKnown RBP13.18□□□□□ -0.3
TMEM253-201ENST00000418511 SMYD3Q9H7B4 428 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 VRTNQ9H8Y1 702 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 LMCD1Q9NZU5 365 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 STK39Q9UEW8 545 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 IRAK3Q9Y616 596 aa13.18□□□□□ -0.3
TMEM253-201ENST00000418511 BRWD1Q9NSI6 2320 aa13.17□□□□□ -0.3
TMEM253-201ENST00000418511 TTC28Q96AY4 2481 aa13.17□□□□□ -0.3
TMEM253-201ENST00000418511 TEX28O15482 410 aa13.17□□□□□ -0.3
TMEM253-201ENST00000418511 N4BP1O75113 896 aaKnown RBP13.17□□□□□ -0.3
TMEM253-201ENST00000418511 CYP11A1P05108 521 aa13.17□□□□□ -0.3
TMEM253-201ENST00000418511 TYMPP19971 482 aa13.17□□□□□ -0.3
TMEM253-201ENST00000418511 CDK11BP21127 795 aaKnown RBP13.17□□□□□ -0.3
TMEM253-201ENST00000418511 PAX3P23760 479 aa13.17□□□□□ -0.3
TMEM253-201ENST00000418511 ASPAP45381 313 aa13.17□□□□□ -0.3
TMEM253-201ENST00000418511 NRIP1P48552 1158 aa13.17□□□□□ -0.3
TMEM253-201ENST00000418511 CDR1P51861 262 aa13.17□□□□□ -0.3
TMEM253-201ENST00000418511 CDH8P55286 799 aa13.17□□□□□ -0.3
TMEM253-201ENST00000418511 LRMPQ12912 555 aa13.17□□□□□ -0.3
TMEM253-201ENST00000418511 MRPL58Q14197 206 aaKnown RBP13.17□□□□□ -0.3
TMEM253-201ENST00000418511 BMS1Q14692 1282 aaKnown RBP13.17□□□□□ -0.3
TMEM253-201ENST00000418511 CCDC85BQ15834 202 aaPredicted RBP13.17□□□□□ -0.3
TMEM253-201ENST00000418511 CTXN3Q4LDR2 81 aa13.17□□□□□ -0.3
TMEM253-201ENST00000418511 VWA3BQ502W6 1294 aa13.17□□□□□ -0.3
TMEM253-201ENST00000418511 OVOS1Q6IE37 1185 aa13.17□□□□□ -0.3
TMEM253-201ENST00000418511 PDE12Q6L8Q7 609 aaKnown RBP13.17□□□□□ -0.3
TMEM253-201ENST00000418511 ANKS3Q6ZW76 656 aa13.17□□□□□ -0.3
TMEM253-201ENST00000418511 ADGRF2Q8IZF7 708 aa13.17□□□□□ -0.3
TMEM253-201ENST00000418511 RNF214Q8ND24 703 aa13.17□□□□□ -0.3
TMEM253-201ENST00000418511 LMO3Q8TAP4 145 aa13.17□□□□□ -0.3
TMEM253-201ENST00000418511 KBTBD7Q8WVZ9 684 aa13.17□□□□□ -0.3
TMEM253-201ENST00000418511 TATDN2Q93075 761 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms