RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.43□□□□□ -0.26
SKA1-203ENST00000417656 HPDLQ96IR7 371 aa13.43□□□□□ -0.26
SKA1-203ENST00000417656 CEP63Q96MT8 703 aa13.43□□□□□ -0.26
SKA1-203ENST00000417656 APOL5Q9BWW9 433 aa13.43□□□□□ -0.26
SKA1-203ENST00000417656 MAN1C1Q9NR34 630 aa13.43□□□□□ -0.26
SKA1-203ENST00000417656 FBXL5Q9UKA1 691 aa13.43□□□□□ -0.26
SKA1-203ENST00000417656 R3HCC1Q9Y3T6 440 aaKnown RBP13.43□□□□□ -0.26
SKA1-203ENST00000417656 BACE2Q9Y5Z0 518 aa13.43□□□□□ -0.26
SKA1-203ENST00000417656 ARHGEF37A1IGU5 675 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 H7C4K7 107 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 TGM5O43548 720 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 TBC1D4O60343 1298 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 CLSTN1O94985 981 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 VNN1O95497 513 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 C4BPAP04003 597 aaKnown RBP13.42□□□□□ -0.26
SKA1-203ENST00000417656 CYP11A1P05108 521 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 SPATA31D3P0C874 917 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 OR1D2P34982 312 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 PIK3CAP42336 1068 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 GCLMP48507 274 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 KCNQ1P51787 676 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 AP3M2P53677 418 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 ARPP19P56211 112 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 MYL6P60660 151 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 ROR1Q01973 937 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 PPP3CAQ08209 521 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 MYO1EQ12965 1108 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 TRPC3Q13507 836 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 MRPL58Q14197 206 aaKnown RBP13.42□□□□□ -0.26
SKA1-203ENST00000417656 ZACNQ401N2 412 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 CCDC40Q4G0X9 1142 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 WSCD1Q658N2 575 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 OVOS1Q6IE37 1185 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 CAVIN1Q6NZI2 390 aaKnown RBP13.42□□□□□ -0.26
SKA1-203ENST00000417656 TMEM184AQ6ZMB5 413 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 SPATA31D4Q6ZUB0 917 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 MSLNLQ96KJ4 702 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 MED15Q96RN5 788 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 DZANK1Q9NVP4 752 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 RWDD2AQ9UIY3 292 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 CD207Q9UJ71 328 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 L1RE1Q9UN81 338 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 SNX9Q9Y5X1 595 aa13.42□□□□□ -0.26
SKA1-203ENST00000417656 MTCL1Q9Y4B5 1905 aaKnown RBP13.42□□□□□ -0.26
SKA1-203ENST00000417656 IKBKBO14920 756 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 OAZ2O95190 189 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 CST3P01034 146 aaPredicted RBP13.41□□□□□ -0.26
SKA1-203ENST00000417656 OR4Q2P0C623 313 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 CPB1P15086 417 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 ENPEPQ07075 957 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 NCOA4Q13772 614 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 RAB33AQ14088 237 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 ZNF699Q32M78 642 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 LEXMQ3ZCV2 418 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 TCERG1LQ5VWI1 586 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 SLC8B1Q6J4K2 584 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 SYCE2Q6PIF2 218 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 C15orf39Q6ZRI6 1047 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 SV2AQ7L0J3 742 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 METTL23Q86XA0 190 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 PDCL2Q8N4E4 241 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 C12orf76Q8N812 135 aaPredicted RBP13.41□□□□□ -0.26
SKA1-203ENST00000417656 OR10T2Q8NGX3 314 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 FEZF2Q8TBJ5 459 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 ELMO3Q96BJ8 720 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 XYLT2Q9H1B5 865 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 GDAP2Q9NXN4 497 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 ARMCX3Q9UH62 379 aaPredicted RBP13.41□□□□□ -0.26
SKA1-203ENST00000417656 DACH1Q9UI36 760 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 FBXW11Q9UKB1 542 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 DSEQ9UL01 958 aa13.41□□□□□ -0.26
SKA1-203ENST00000417656 C2orf16Q68DN1 1984 aa13.4□□□□□ -0.26
SKA1-203ENST00000417656 WDR27A2RRH5 827 aa13.4□□□□□ -0.26
SKA1-203ENST00000417656 HUS1O60921 280 aa13.4□□□□□ -0.26
SKA1-203ENST00000417656 HLA-DRAP01903 254 aa13.4□□□□□ -0.26
SKA1-203ENST00000417656 MXI1P50539 228 aa13.4□□□□□ -0.26
SKA1-203ENST00000417656 SMAD4Q13485 552 aaKnown RBP13.4□□□□□ -0.26
SKA1-203ENST00000417656 RARS2Q5T160 578 aaKnown RBP13.4□□□□□ -0.26
SKA1-203ENST00000417656 LILRA6Q6PI73 481 aa13.4□□□□□ -0.26
SKA1-203ENST00000417656 FILIP1Q7Z7B0 1213 aa13.4□□□□□ -0.26
SKA1-203ENST00000417656 OSTM1Q86WC4 334 aa13.4□□□□□ -0.26
SKA1-203ENST00000417656 ADGRF2Q8IZF7 708 aa13.4□□□□□ -0.26
SKA1-203ENST00000417656 TOP6BLQ8N6T0 577 aa13.4□□□□□ -0.26
SKA1-203ENST00000417656 SMRP1Q8NCR6 262 aa13.4□□□□□ -0.26
SKA1-203ENST00000417656 KREMEN2Q8NCW0 462 aa13.4□□□□□ -0.26
SKA1-203ENST00000417656 TAS1R2Q8TE23 839 aa13.4□□□□□ -0.26
SKA1-203ENST00000417656 ATXN2LQ8WWM7 1075 aaKnown RBP13.4□□□□□ -0.26
SKA1-203ENST00000417656 SYAP1Q96A49 352 aaPredicted RBP13.4□□□□□ -0.26
SKA1-203ENST00000417656 TMEM209Q96SK2 561 aa13.4□□□□□ -0.26
SKA1-203ENST00000417656 RTP3Q9BQQ7 232 aa13.4□□□□□ -0.26
SKA1-203ENST00000417656 SRRTQ9BXP5 876 aaKnown RBP13.4□□□□□ -0.26
SKA1-203ENST00000417656 SFXN1Q9H9B4 322 aa13.4□□□□□ -0.26
SKA1-203ENST00000417656 TMEM8AQ9HCN3 771 aa13.4□□□□□ -0.26
SKA1-203ENST00000417656 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.4□□□□□ -0.26
SKA1-203ENST00000417656 CDH22Q9UJ99 828 aa13.4□□□□□ -0.26
SKA1-203ENST00000417656 POLIQ9UNA4 740 aa13.4□□□□□ -0.26
SKA1-203ENST00000417656 DENND4AQ7Z401 1863 aa13.4□□□□□ -0.26
SKA1-203ENST00000417656 XIRP2A4UGR9 3374 aa13.39□□□□□ -0.27
SKA1-203ENST00000417656 GRXCR2A6NFK2 248 aa13.39□□□□□ -0.27
SKA1-203ENST00000417656 OR6C75A6NL08 312 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms