RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 KXD1Q9BQD3 176 aa19.34■□□□□ 0.69
CPNE1-210ENST00000416778 LRRC27Q9C0I9 530 aa19.34■□□□□ 0.69
CPNE1-210ENST00000416778 TNMDQ9H2S6 317 aa19.34■□□□□ 0.69
CPNE1-210ENST00000416778 CUEDC2Q9H467 287 aa19.34■□□□□ 0.69
CPNE1-210ENST00000416778 SLC27A5Q9Y2P5 690 aa19.34■□□□□ 0.69
CPNE1-210ENST00000416778 PDCD11Q14690 1871 aaKnown RBP19.34■□□□□ 0.69
CPNE1-210ENST00000416778 CYB561D2O14569 222 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 ECI2O75521 394 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 LDHAP00338 332 aaKnown RBP19.33■□□□□ 0.68
CPNE1-210ENST00000416778 F13A1P00488 732 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 ODC1P11926 461 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 HOXD13P35453 343 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 EPHA5P54756 1037 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 STARD6P59095 220 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 FOXD4L6Q3SYB3 417 aaPredicted RBP19.33■□□□□ 0.68
CPNE1-210ENST00000416778 SLC44A4Q53GD3 710 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 SCARA3Q6AZY7 606 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 IQCEQ6IPM2 695 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 CNNM4Q6P4Q7 775 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 FOXD4L3Q6VB84 417 aaPredicted RBP19.33■□□□□ 0.68
CPNE1-210ENST00000416778 IQUBQ8NA54 791 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 DTWD2Q8NBA8 298 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 ATAD1Q8NBU5 361 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 GLIS3Q8NEA6 775 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 HPS3Q969F9 1004 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 SAAL1Q96ER3 474 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 ZSWIM3Q96MP5 696 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 CBWD1Q9BRT8 395 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 LRRC3Q9BY71 257 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 TRIM9Q9C026 710 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 TMEM206Q9H813 350 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 TBC1D17Q9HA65 648 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 FAM86C1Q9NVL1 165 aa19.33■□□□□ 0.68
CPNE1-210ENST00000416778 AMPD3Q01432 767 aa19.32■□□□□ 0.68
CPNE1-210ENST00000416778 PKP1Q13835 747 aa19.32■□□□□ 0.68
CPNE1-210ENST00000416778 FAM78AQ5JUQ0 283 aa19.32■□□□□ 0.68
CPNE1-210ENST00000416778 ATL3Q6DD88 541 aa19.32■□□□□ 0.68
CPNE1-210ENST00000416778 ARMCX5Q6P1M9 558 aa19.32■□□□□ 0.68
CPNE1-210ENST00000416778 PDZD4Q76G19 769 aaPredicted RBP19.32■□□□□ 0.68
CPNE1-210ENST00000416778 CCDC105Q8IYK2 499 aa19.32■□□□□ 0.68
CPNE1-210ENST00000416778 ELMOD1Q8N336 334 aa19.32■□□□□ 0.68
CPNE1-210ENST00000416778 OR10T2Q8NGX3 314 aa19.32■□□□□ 0.68
CPNE1-210ENST00000416778 CXorf38Q8TB03 319 aa19.32■□□□□ 0.68
CPNE1-210ENST00000416778 DHX58Q96C10 678 aa19.32■□□□□ 0.68
CPNE1-210ENST00000416778 C7orf25Q9BPX7 421 aa19.32■□□□□ 0.68
CPNE1-210ENST00000416778 DNAJC25Q9H1X3 360 aa19.32■□□□□ 0.68
CPNE1-210ENST00000416778 PCIF1Q9H4Z3 704 aa19.32■□□□□ 0.68
CPNE1-210ENST00000416778 ARHGEF3Q9NR81 526 aa19.32■□□□□ 0.68
CPNE1-210ENST00000416778 RCOR1Q9UKL0 485 aa19.32■□□□□ 0.68
CPNE1-210ENST00000416778 PCDHA7Q9UN72 937 aa19.32■□□□□ 0.68
CPNE1-210ENST00000416778 GOLGA8IPA6NC78 632 aa19.31■□□□□ 0.68
CPNE1-210ENST00000416778 GOLGA8JA6NMD2 632 aa19.31■□□□□ 0.68
CPNE1-210ENST00000416778 KPNA7A9QM74 516 aa19.31■□□□□ 0.68
CPNE1-210ENST00000416778 EXTL3O43909 919 aa19.31■□□□□ 0.68
CPNE1-210ENST00000416778 HSP90AA1P07900 732 aaKnown RBP19.31■□□□□ 0.68
CPNE1-210ENST00000416778 TAF6P49848 677 aa19.31■□□□□ 0.68
CPNE1-210ENST00000416778 SNW1Q13573 536 aaKnown RBP19.31■□□□□ 0.68
CPNE1-210ENST00000416778 LRRTM3Q86VH5 581 aa19.31■□□□□ 0.68
CPNE1-210ENST00000416778 BRSK2Q8IWQ3 736 aa19.31■□□□□ 0.68
CPNE1-210ENST00000416778 LEMD2Q8NC56 503 aa19.31■□□□□ 0.68
CPNE1-210ENST00000416778 SPRYD3Q8NCJ5 442 aa19.31■□□□□ 0.68
CPNE1-210ENST00000416778 ZNF507Q8TCN5 953 aa19.31■□□□□ 0.68
CPNE1-210ENST00000416778 ELSPBP1Q96BH3 223 aa19.31■□□□□ 0.68
CPNE1-210ENST00000416778 ZCWPW1Q9H0M4 648 aa19.31■□□□□ 0.68
CPNE1-210ENST00000416778 DLGAP2Q9P1A6 1054 aa19.31■□□□□ 0.68
CPNE1-210ENST00000416778 HSFX1Q9UBD0 423 aa19.31■□□□□ 0.68
CPNE1-210ENST00000416778 DSEQ9UL01 958 aa19.31■□□□□ 0.68
CPNE1-210ENST00000416778 SIT1Q9Y3P8 196 aa19.31■□□□□ 0.68
CPNE1-210ENST00000416778 YIPF1Q9Y548 306 aa19.31■□□□□ 0.68
CPNE1-210ENST00000416778 USP34Q70CQ2 3546 aa19.3■□□□□ 0.68
CPNE1-210ENST00000416778 MTMR11A4FU01 709 aa19.3■□□□□ 0.68
CPNE1-210ENST00000416778 POLR2DO15514 142 aaKnown RBP19.3■□□□□ 0.68
CPNE1-210ENST00000416778 MYL4P12829 197 aa19.3■□□□□ 0.68
CPNE1-210ENST00000416778 GJA1P17302 382 aa19.3■□□□□ 0.68
CPNE1-210ENST00000416778 FCARP24071 287 aa19.3■□□□□ 0.68
CPNE1-210ENST00000416778 TFAMQ00059 246 aaKnown RBP19.3■□□□□ 0.68
CPNE1-210ENST00000416778 WSCD1Q658N2 575 aa19.3■□□□□ 0.68
CPNE1-210ENST00000416778 EPM2AIP1Q7L775 607 aaPredicted RBP19.3■□□□□ 0.68
CPNE1-210ENST00000416778 DNAJB7Q7Z6W7 309 aaPredicted RBP19.3■□□□□ 0.68
CPNE1-210ENST00000416778 KCNG4Q8TDN1 519 aa19.3■□□□□ 0.68
CPNE1-210ENST00000416778 CACTINQ8WUQ7 758 aaKnown RBP19.3■□□□□ 0.68
CPNE1-210ENST00000416778 SHDQ96IW2 340 aa19.3■□□□□ 0.68
CPNE1-210ENST00000416778 PYM1Q9BRP8 204 aaKnown RBP19.3■□□□□ 0.68
CPNE1-210ENST00000416778 DDX23Q9BUQ8 820 aaKnown RBP19.3■□□□□ 0.68
CPNE1-210ENST00000416778 GTF3C3Q9Y5Q9 886 aa19.3■□□□□ 0.68
CPNE1-210ENST00000416778 PROB1E7EW31 1015 aa19.29■□□□□ 0.68
CPNE1-210ENST00000416778 ALDH1A3P47895 512 aa19.29■□□□□ 0.68
CPNE1-210ENST00000416778 EPHB3P54753 998 aa19.29■□□□□ 0.68
CPNE1-210ENST00000416778 PFKPQ01813 784 aa19.29■□□□□ 0.68
CPNE1-210ENST00000416778 METTL23Q86XA0 190 aa19.29■□□□□ 0.68
CPNE1-210ENST00000416778 THEM5Q8N1Q8 247 aa19.29■□□□□ 0.68
CPNE1-210ENST00000416778 C1orf127Q8N9H9 656 aa19.29■□□□□ 0.68
CPNE1-210ENST00000416778 ASB16Q96NS5 453 aa19.29■□□□□ 0.68
CPNE1-210ENST00000416778 ZFP14Q9HCL3 533 aa19.29■□□□□ 0.68
CPNE1-210ENST00000416778 PDE11AQ9HCR9 933 aa19.29■□□□□ 0.68
CPNE1-210ENST00000416778 ASAH2Q9NR71 780 aa19.29■□□□□ 0.68
CPNE1-210ENST00000416778 RBAKQ9NYW8 714 aaPredicted RBP19.29■□□□□ 0.68
CPNE1-210ENST00000416778 CFAP45Q9UL16 551 aa19.29■□□□□ 0.68
CPNE1-210ENST00000416778 AGAP1Q9UPQ3 857 aa19.29■□□□□ 0.68
CPNE1-210ENST00000416778 ASB3Q9Y575 518 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms