RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 VPS13AQ96RL7 3174 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 MTMR11A4FU01 709 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 SPTLC2O15270 562 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 XPOTO43592 962 aaKnown RBP16.36■□□□□ 0.21
UBXN4-203ENST00000416538 LRRN2O75325 713 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 SOAT2O75908 522 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 PRPF6O94906 941 aaKnown RBP16.36■□□□□ 0.21
UBXN4-203ENST00000416538 GJA1P17302 382 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 TYMPP19971 482 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 ELF1P32519 619 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 HOXD13P35453 343 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 NUBP1P53384 320 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 EPHA5P54756 1037 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 FOXD4L6Q3SYB3 417 aaPredicted RBP16.36■□□□□ 0.21
UBXN4-203ENST00000416538 OVOS1Q6IE37 1185 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 SLFN12LQ6IEE8 588 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 FOXD4L3Q6VB84 417 aaPredicted RBP16.36■□□□□ 0.21
UBXN4-203ENST00000416538 DSTYKQ6XUX3 929 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 MTSS1LQ765P7 747 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 TMC8Q8IU68 726 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 BRSK2Q8IWQ3 736 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 CD302Q8IX05 232 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 BORCS6Q96GS4 357 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 TSPAN18Q96SJ8 248 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 LRRC3Q9BY71 257 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 ASB7Q9H672 318 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 PANK4Q9NVE7 773 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 DLGAP2Q9P1A6 1054 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 DERAQ9Y315 318 aa16.36■□□□□ 0.21
UBXN4-203ENST00000416538 ANAPC1Q9H1A4 1944 aa16.35■□□□□ 0.21
UBXN4-203ENST00000416538 GOLGA8IPA6NC78 632 aa16.35■□□□□ 0.21
UBXN4-203ENST00000416538 SHISA7A6NL88 538 aa16.35■□□□□ 0.21
UBXN4-203ENST00000416538 GOLGA8JA6NMD2 632 aa16.35■□□□□ 0.21
UBXN4-203ENST00000416538 PPP6R2O75170 966 aa16.35■□□□□ 0.21
UBXN4-203ENST00000416538 YEATS4O95619 227 aa16.35■□□□□ 0.21
UBXN4-203ENST00000416538 GLULP15104 373 aa16.35■□□□□ 0.21
UBXN4-203ENST00000416538 PTPN2P17706 415 aa16.35■□□□□ 0.21
UBXN4-203ENST00000416538 ABCD1P33897 745 aa16.35■□□□□ 0.21
UBXN4-203ENST00000416538 TANGO2Q6ICL3 276 aa16.35■□□□□ 0.21
UBXN4-203ENST00000416538 ATAD1Q8NBU5 361 aa16.35■□□□□ 0.21
UBXN4-203ENST00000416538 CXorf38Q8TB03 319 aa16.35■□□□□ 0.21
UBXN4-203ENST00000416538 ZSWIM3Q96MP5 696 aa16.35■□□□□ 0.21
UBXN4-203ENST00000416538 ACCSQ96QU6 501 aa16.35■□□□□ 0.21
UBXN4-203ENST00000416538 FAM213AQ9BRX8 229 aa16.35■□□□□ 0.21
UBXN4-203ENST00000416538 KBTBD4Q9NVX7 518 aa16.35■□□□□ 0.21
UBXN4-203ENST00000416538 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.35■□□□□ 0.21
UBXN4-203ENST00000416538 PTPRJQ12913 1337 aa16.35■□□□□ 0.21
UBXN4-203ENST00000416538 OR6C75A6NL08 312 aa16.34■□□□□ 0.21
UBXN4-203ENST00000416538 F13A1P00488 732 aa16.34■□□□□ 0.21
UBXN4-203ENST00000416538 CYP11A1P05108 521 aa16.34■□□□□ 0.21
UBXN4-203ENST00000416538 DCNP07585 359 aaKnown RBP16.34■□□□□ 0.21
UBXN4-203ENST00000416538 ZSCAN22P10073 491 aaPredicted RBP16.34■□□□□ 0.21
UBXN4-203ENST00000416538 ODC1P11926 461 aa16.34■□□□□ 0.21
UBXN4-203ENST00000416538 CASP1P29466 404 aa16.34■□□□□ 0.21
UBXN4-203ENST00000416538 DUSP4Q13115 394 aa16.34■□□□□ 0.21
UBXN4-203ENST00000416538 GPR17Q13304 367 aa16.34■□□□□ 0.21
UBXN4-203ENST00000416538 FAM78AQ5JUQ0 283 aa16.34■□□□□ 0.21
UBXN4-203ENST00000416538 CENPPQ6IPU0 288 aa16.34■□□□□ 0.21
UBXN4-203ENST00000416538 HSCBQ8IWL3 235 aa16.34■□□□□ 0.21
UBXN4-203ENST00000416538 DTWD2Q8NBA8 298 aa16.34■□□□□ 0.21
UBXN4-203ENST00000416538 SHKBP1Q8TBC3 707 aa16.34■□□□□ 0.21
UBXN4-203ENST00000416538 ATOH1Q92858 354 aaPredicted RBP16.34■□□□□ 0.21
UBXN4-203ENST00000416538 DHX58Q96C10 678 aa16.34■□□□□ 0.21
UBXN4-203ENST00000416538 CHAMP1Q96JM3 812 aa16.34■□□□□ 0.21
UBXN4-203ENST00000416538 TRIM9Q9C026 710 aa16.34■□□□□ 0.21
UBXN4-203ENST00000416538 TNMDQ9H2S6 317 aa16.34■□□□□ 0.21
UBXN4-203ENST00000416538 ZNF334Q9HCZ1 680 aaPredicted RBP16.34■□□□□ 0.21
UBXN4-203ENST00000416538 DPP3Q9NY33 737 aa16.34■□□□□ 0.21
UBXN4-203ENST00000416538 GDE1Q9NZC3 331 aa16.34■□□□□ 0.21
UBXN4-203ENST00000416538 ECI2O75521 394 aa16.33■□□□□ 0.2
UBXN4-203ENST00000416538 MYL4P12829 197 aa16.33■□□□□ 0.2
UBXN4-203ENST00000416538 SNW1Q13573 536 aaKnown RBP16.33■□□□□ 0.2
UBXN4-203ENST00000416538 MYBPC2Q14324 1141 aa16.33■□□□□ 0.2
UBXN4-203ENST00000416538 CCDC142Q17RM4 750 aa16.33■□□□□ 0.2
UBXN4-203ENST00000416538 STXBP5Q5T5C0 1151 aa16.33■□□□□ 0.2
UBXN4-203ENST00000416538 WSCD1Q658N2 575 aa16.33■□□□□ 0.2
UBXN4-203ENST00000416538 PHLDB3Q6NSJ2 640 aa16.33■□□□□ 0.2
UBXN4-203ENST00000416538 PDZD4Q76G19 769 aaPredicted RBP16.33■□□□□ 0.2
UBXN4-203ENST00000416538 USP37Q86T82 979 aa16.33■□□□□ 0.2
UBXN4-203ENST00000416538 C1orf127Q8N9H9 656 aa16.33■□□□□ 0.2
UBXN4-203ENST00000416538 PJA1Q8NG27 643 aa16.33■□□□□ 0.2
UBXN4-203ENST00000416538 RSPRY1Q96DX4 576 aa16.33■□□□□ 0.2
UBXN4-203ENST00000416538 ASB16Q96NS5 453 aa16.33■□□□□ 0.2
UBXN4-203ENST00000416538 PYM1Q9BRP8 204 aaKnown RBP16.33■□□□□ 0.2
UBXN4-203ENST00000416538 DDX23Q9BUQ8 820 aaKnown RBP16.33■□□□□ 0.2
UBXN4-203ENST00000416538 SLC27A5Q9Y2P5 690 aa16.33■□□□□ 0.2
UBXN4-203ENST00000416538 GVINP1Q7Z2Y8 2422 aa16.33■□□□□ 0.2
UBXN4-203ENST00000416538 CUTAO60888 179 aa16.32■□□□□ 0.2
UBXN4-203ENST00000416538 ATF6P18850 670 aa16.32■□□□□ 0.2
UBXN4-203ENST00000416538 GARTP22102 1010 aa16.32■□□□□ 0.2
UBXN4-203ENST00000416538 NBL1P41271 181 aa16.32■□□□□ 0.2
UBXN4-203ENST00000416538 HELZP42694 1942 aaKnown RBP16.32■□□□□ 0.2
UBXN4-203ENST00000416538 TAF6P49848 677 aa16.32■□□□□ 0.2
UBXN4-203ENST00000416538 STARD6P59095 220 aa16.32■□□□□ 0.2
UBXN4-203ENST00000416538 POU5F1Q01860 360 aaKnown RBP16.32■□□□□ 0.2
UBXN4-203ENST00000416538 EHHADHQ08426 723 aa16.32■□□□□ 0.2
UBXN4-203ENST00000416538 GRM2Q14416 872 aa16.32■□□□□ 0.2
UBXN4-203ENST00000416538 POSTNQ15063 836 aa16.32■□□□□ 0.2
UBXN4-203ENST00000416538 ANGPT1Q15389 498 aa16.32■□□□□ 0.2
UBXN4-203ENST00000416538 TEAD2Q15562 447 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms