RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 PPP1R13LQ8WUF5 828 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 NELFBQ8WX92 580 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 LINC01599Q8WXQ3 324 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 FAM122AQ96E09 287 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 CPB2Q96IY4 423 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 TGS1Q96RS0 853 aaKnown RBP8.31□□□□□ -1.08
RBM39-209ENST00000416529 C11orf84Q9BUA3 381 aaPredicted RBP8.31□□□□□ -1.08
RBM39-209ENST00000416529 COLEC11Q9BWP8 271 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 TMEM63CQ9P1W3 806 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 ANKFY1Q9P2R3 1169 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 PUF60Q9UHX1 559 aaKnown RBP8.31□□□□□ -1.08
RBM39-209ENST00000416529 ITGA11Q9UKX5 1188 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 MAFFQ9ULX9 164 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 GDAQ9Y2T3 454 aa8.31□□□□□ -1.08
RBM39-209ENST00000416529 FNDC1Q4ZHG4 1894 aaPredicted RBP8.3□□□□□ -1.08
RBM39-209ENST00000416529 SMIM28A0A1B0GU29 152 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 ARL5CA6NH57 179 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 LRRC10BA6NIK2 292 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 ANKRD63C9JTQ0 380 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 NCK2O43639 380 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 ZC3H11AO75152 810 aaKnown RBP eCLIP8.3□□□□□ -1.08
RBM39-209ENST00000416529 RECQL4O94761 1208 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 ACRP10323 421 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 TRIM21P19474 475 aaKnown RBP8.3□□□□□ -1.08
RBM39-209ENST00000416529 POU3F3P20264 500 aaPredicted RBP8.3□□□□□ -1.08
RBM39-209ENST00000416529 EPHB4P54760 987 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 ERVK-21P61565 698 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 MYL5Q02045 173 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 KRT17Q04695 432 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 BTG3Q14201 252 aaPredicted RBP8.3□□□□□ -1.08
RBM39-209ENST00000416529 TPD52L1Q16890 204 aaPredicted RBP8.3□□□□□ -1.08
RBM39-209ENST00000416529 SLC10A6Q3KNW5 377 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 FMNL3Q8IVF7 1028 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 THNSL1Q8IYQ7 743 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 RHBDD1Q8TEB9 315 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 PARD3BQ8TEW8 1205 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 IQCDQ96DY2 449 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 ANKRD36BP1Q96IX9 119 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 ZNF560Q96MR9 790 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 ZNF558Q96NG5 402 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 CASD1Q96PB1 797 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 PPP1R10Q96QC0 940 aaKnown RBP8.3□□□□□ -1.08
RBM39-209ENST00000416529 PPP1R16BQ96T49 567 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 CBWD1Q9BRT8 395 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 EIF2AQ9BY44 585 aaKnown RBP8.3□□□□□ -1.08
RBM39-209ENST00000416529 SEMA6BQ9H3T3 888 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 VRTNQ9H8Y1 702 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 SLC28A3Q9HAS3 691 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 RBAKQ9NYW8 714 aaPredicted RBP8.3□□□□□ -1.08
RBM39-209ENST00000416529 MAGEC2Q9UBF1 373 aaPredicted RBP8.3□□□□□ -1.08
RBM39-209ENST00000416529 PARP2Q9UGN5 583 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 ARMCX3Q9UH62 379 aaPredicted RBP8.3□□□□□ -1.08
RBM39-209ENST00000416529 DSEQ9UL01 958 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 HRH3Q9Y5N1 445 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 IRAK3Q9Y616 596 aa8.3□□□□□ -1.08
RBM39-209ENST00000416529 TDRD15B5MCY1 1934 aaKnown RBP8.3□□□□□ -1.08
RBM39-209ENST00000416529 PDCD11Q14690 1871 aaKnown RBP8.3□□□□□ -1.08
RBM39-209ENST00000416529 SYN3O14994 580 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 CSDE1O75534 798 aaKnown RBP8.29□□□□□ -1.08
RBM39-209ENST00000416529 TNNC2P02585 160 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 P4HA1P13674 534 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 BMP6P22004 513 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 FGFR4P22455 802 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 RFX1P22670 979 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 CASP1P29466 404 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 BMPR1AP36894 532 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 RBP5P82980 135 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 RNASELQ05823 741 aaKnown RBP8.29□□□□□ -1.08
RBM39-209ENST00000416529 TYRO3Q06418 890 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 CYP24A1Q07973 514 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 KCNA1Q09470 495 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 SMARCB1Q12824 385 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 BFSP1Q12934 665 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 MYO1EQ12965 1108 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 TMEM132DQ14C87 1099 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 ENOX2Q16206 610 aaKnown RBP8.29□□□□□ -1.08
RBM39-209ENST00000416529 ANKRD40Q6AI12 368 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 CRELD2Q6UXH1 353 aaPredicted RBP8.29□□□□□ -1.08
RBM39-209ENST00000416529 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.29□□□□□ -1.086e-19■■■■■ 56.7
RBM39-209ENST00000416529 LRRC55Q6ZSA7 311 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 NELFCDQ8IXH7 590 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 FAM186BQ8IYM0 893 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 PHTF2Q8N3S3 785 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 CCDC150Q8NCX0 1101 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 GSTCDQ8NEC7 633 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 FAM200AQ8TCP9 573 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 PPP2R3CQ969Q6 453 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 JAKMIP2Q96AA8 810 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 BORCS6Q96GS4 357 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 ZNF668Q96K58 619 aaPredicted RBP8.29□□□□□ -1.08
RBM39-209ENST00000416529 GAD1Q99259 594 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 CGRRF1Q99675 332 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 FAM213AQ9BRX8 229 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 FUCA2Q9BTY2 467 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 NXF3Q9H4D5 531 aaKnown RBP8.29□□□□□ -1.08
RBM39-209ENST00000416529 POLD4Q9HCU8 107 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.29□□□□□ -1.08
RBM39-209ENST00000416529 TBC1D13Q9NVG8 400 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 INTS13Q9NVM9 706 aa8.29□□□□□ -1.08
RBM39-209ENST00000416529 SNTG2Q9NY99 539 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms