RNA–Protein interactions for RNA: ENST00000416500.5

LCP1-203, Transcript of lymphocyte cytosolic protein 1, humanhuman

TSL 3

Gene LCP1, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1-203ENST00000416500 NSUN3Q9H649 340 aaKnown RBP9.67□□□□□ -0.86
LCP1-203ENST00000416500 KIAA1586Q9HCI6 787 aa9.67□□□□□ -0.86
LCP1-203ENST00000416500 PRDM6Q9NQX0 595 aa9.67□□□□□ -0.86
LCP1-203ENST00000416500 ENTPD7Q9NQZ7 604 aa9.67□□□□□ -0.86
LCP1-203ENST00000416500 CHST7Q9NS84 486 aa9.67□□□□□ -0.86
LCP1-203ENST00000416500 INTS13Q9NVM9 706 aa9.67□□□□□ -0.86
LCP1-203ENST00000416500 DPP3Q9NY33 737 aa9.67□□□□□ -0.86
LCP1-203ENST00000416500 DERAQ9Y315 318 aa9.67□□□□□ -0.86
LCP1-203ENST00000416500 SPTBN5Q9NRC6 3674 aaKnown RBP9.67□□□□□ -0.86
LCP1-203ENST00000416500 CARNS1A5YM72 827 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 C2orf71A6NGG8 1288 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 PIRO00625 290 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 C2CD2LO14523 706 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 DLATP10515 647 aaKnown RBP9.66□□□□□ -0.86
LCP1-203ENST00000416500 CCNE1P24864 410 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 STX17P56962 302 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 DLG4P78352 724 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 RBM10P98175 930 aaKnown RBP9.66□□□□□ -0.86
LCP1-203ENST00000416500 ADAM9Q13443 819 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 MYBPC2Q14324 1141 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 PSMD6Q15008 389 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 NR6A1Q15406 480 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 PTPN14Q15678 1187 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 TIGD5Q53EQ6 642 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 RTP2Q5QGT7 225 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 C1orf220Q5T0J3 134 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 FAM171A1Q5VUB5 890 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 KIAA0319Q5VV43 1072 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 TTI2Q6NXR4 508 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 RBM43Q6ZSC3 357 aaKnown RBP9.66□□□□□ -0.86
LCP1-203ENST00000416500 NT5DC4Q86YG4 428 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 ZC3H3Q8IXZ2 948 aaKnown RBP9.66□□□□□ -0.86
LCP1-203ENST00000416500 C1orf127Q8N9H9 656 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 TRIML1Q8N9V2 468 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 NELFBQ8WX92 580 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 CCDC127Q96BQ5 260 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 BORCS6Q96GS4 357 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 DHTKD1Q96HY7 919 aaPredicted RBP9.66□□□□□ -0.86
LCP1-203ENST00000416500 DUSP9Q99956 384 aaKnown RBP9.66□□□□□ -0.86
LCP1-203ENST00000416500 MTMR12Q9C0I1 747 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 NGRNQ9NPE2 291 aaKnown RBP9.66□□□□□ -0.86
LCP1-203ENST00000416500 TMEM63CQ9P1W3 806 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 SIX4Q9UIU6 781 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 CTNND2Q9UQB3 1225 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 PLXNA3P51805 1871 aa9.66□□□□□ -0.86
LCP1-203ENST00000416500 SF3B1O75533 1304 aaKnown RBP eCLIP9.65□□□□□ -0.867e-6■■■■■ 33.4
LCP1-203ENST00000416500 LRRIQ3A6PVS8 624 aaPredicted RBP9.65□□□□□ -0.86
LCP1-203ENST00000416500 LINC01565O15544 149 aa9.65□□□□□ -0.86
LCP1-203ENST00000416500 XPOTO43592 962 aaKnown RBP9.65□□□□□ -0.86
LCP1-203ENST00000416500 MBD3O95983 291 aa9.65□□□□□ -0.86
LCP1-203ENST00000416500 ITGB3P05106 788 aa9.65□□□□□ -0.86
LCP1-203ENST00000416500 RPL17P18621 184 aaKnown RBP9.65□□□□□ -0.86
LCP1-203ENST00000416500 FGFR3P22607 806 aa9.65□□□□□ -0.86
LCP1-203ENST00000416500 TKTP29401 623 aaKnown RBP9.65□□□□□ -0.86
LCP1-203ENST00000416500 NRIP1P48552 1158 aa9.65□□□□□ -0.86
LCP1-203ENST00000416500 AARSP49588 968 aaKnown RBP eCLIP9.65□□□□□ -0.86
LCP1-203ENST00000416500 LILRA4P59901 499 aa9.65□□□□□ -0.86
LCP1-203ENST00000416500 DSG1Q02413 1049 aa9.65□□□□□ -0.86
LCP1-203ENST00000416500 SMC1AQ14683 1233 aaKnown RBP9.65□□□□□ -0.86
LCP1-203ENST00000416500 SURF1Q15526 300 aa9.65□□□□□ -0.86
LCP1-203ENST00000416500 EDRF1Q3B7T1 1238 aa9.65□□□□□ -0.86
LCP1-203ENST00000416500 USP41Q3LFD5 358 aa9.65□□□□□ -0.86
LCP1-203ENST00000416500 DPCR1Q3MIW9 517 aa9.65□□□□□ -0.86
LCP1-203ENST00000416500 PDE12Q6L8Q7 609 aaKnown RBP9.65□□□□□ -0.86
LCP1-203ENST00000416500 PRSS55Q6UWB4 352 aaPredicted RBP9.65□□□□□ -0.86
LCP1-203ENST00000416500 CEP57Q86XR8 500 aa9.65□□□□□ -0.86
LCP1-203ENST00000416500 VN1R2Q8NFZ6 395 aa9.65□□□□□ -0.86
LCP1-203ENST00000416500 PARD3BQ8TEW8 1205 aa9.65□□□□□ -0.86
LCP1-203ENST00000416500 SUSD3Q96L08 255 aa9.65□□□□□ -0.86
LCP1-203ENST00000416500 CGRRF1Q99675 332 aa9.65□□□□□ -0.86
LCP1-203ENST00000416500 GTPBP4Q9BZE4 634 aaKnown RBP9.65□□□□□ -0.86
LCP1-203ENST00000416500 IGFLR1Q9H665 355 aa9.65□□□□□ -0.86
LCP1-203ENST00000416500 TLE6Q9H808 572 aa9.65□□□□□ -0.86
LCP1-203ENST00000416500 NUB1Q9Y5A7 615 aa9.65□□□□□ -0.86
LCP1-203ENST00000416500 IRAK3Q9Y616 596 aa9.65□□□□□ -0.86
LCP1-203ENST00000416500 DOCK6Q96HP0 2047 aa9.65□□□□□ -0.87
LCP1-203ENST00000416500 MTCL1Q9Y4B5 1905 aaKnown RBP9.64□□□□□ -0.87
LCP1-203ENST00000416500 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.64□□□□□ -0.87
LCP1-203ENST00000416500 PSMA7O14818 248 aa9.64□□□□□ -0.87
LCP1-203ENST00000416500 MAPK13O15264 365 aa9.64□□□□□ -0.87
LCP1-203ENST00000416500 ADAM12O43184 909 aa9.64□□□□□ -0.87
LCP1-203ENST00000416500 CLASP2O75122 1294 aaKnown RBP9.64□□□□□ -0.87
LCP1-203ENST00000416500 GLP2RO95838 553 aa9.64□□□□□ -0.87
LCP1-203ENST00000416500 CST3P01034 146 aaPredicted RBP9.64□□□□□ -0.87
LCP1-203ENST00000416500 C4BPAP04003 597 aaKnown RBP9.64□□□□□ -0.87
LCP1-203ENST00000416500 URODP06132 367 aa9.64□□□□□ -0.87
LCP1-203ENST00000416500 CNPP09543 421 aaKnown RBP9.64□□□□□ -0.87
LCP1-203ENST00000416500 TMEM191BP0C7N4 346 aa9.64□□□□□ -0.87
LCP1-203ENST00000416500 TRIM49P0CI25 452 aa9.64□□□□□ -0.87
LCP1-203ENST00000416500 TRIM49CP0CI26 452 aa9.64□□□□□ -0.87
LCP1-203ENST00000416500 TNNI1P19237 187 aa9.64□□□□□ -0.87
LCP1-203ENST00000416500 RPL13P26373 211 aaKnown RBP9.64□□□□□ -0.87
LCP1-203ENST00000416500 VARSP26640 1264 aaKnown RBP9.64□□□□□ -0.87
LCP1-203ENST00000416500 POLR2BP30876 1174 aaKnown RBP9.64□□□□□ -0.87
LCP1-203ENST00000416500 CA8P35219 290 aa9.64□□□□□ -0.87
LCP1-203ENST00000416500 LTBRP36941 435 aa9.64□□□□□ -0.87
LCP1-203ENST00000416500 GLUD2P49448 558 aa9.64□□□□□ -0.87
LCP1-203ENST00000416500 NLRP12P59046 1061 aa9.64□□□□□ -0.87
LCP1-203ENST00000416500 CLDN10P78369 228 aa9.64□□□□□ -0.87
LCP1-203ENST00000416500 FKBP3Q00688 224 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms