RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 GJB1P08034 283 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 FAM163BP0C2L3 166 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 OSMP13725 252 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 ATF2P15336 505 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 AGXTP21549 392 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 CD40P25942 277 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 AOAHP28039 575 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 MC3RP41968 323 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 EPHB3P54753 998 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 FAM193AP78312 1265 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 SETQ01105 290 aaPredicted RBP7.1□□□□□ -1.27
EPHA4-204ENST00000415749 SRSF2Q01130 221 aaKnown RBP7.1□□□□□ -1.27
EPHA4-204ENST00000415749 EPHA7Q15375 998 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 DLGAP5Q15398 846 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 TOR2AQ5JU69 321 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 CATSPEREQ5SY80 951 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 Q7L0L9 218 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 IGDCC3Q8IVU1 814 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 CLASRPQ8N2M8 674 aaKnown RBP7.1□□□□□ -1.27
EPHA4-204ENST00000415749 HIPK4Q8NE63 616 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 SIGLEC10Q96LC7 697 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 GBP4Q96PP9 640 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 SLC2A13Q96QE2 648 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 WRNIP1Q96S55 665 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 CRB3Q9BUF7 120 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 ARHGAP39Q9C0H5 1083 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 MTMR10Q9NXD2 777 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 POLHQ9Y253 713 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 GPR45Q9Y5Y3 372 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 IRAK3Q9Y616 596 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 LAMB4A4D0S4 1761 aa7.1□□□□□ -1.27
EPHA4-204ENST00000415749 CCL15-CCL14A0A0B4J2E2 113 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 CFAP69A5D8W1 941 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 NFIBO00712 420 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 LDHCP07864 332 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 MMEP08473 750 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 CCL5P13501 91 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 IGFBP6P24592 240 aaPredicted RBP7.09□□□□□ -1.27
EPHA4-204ENST00000415749 FOXO4P98177 505 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 MESP2Q0VG99 397 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 IFIT5Q13325 482 aaKnown RBP7.09□□□□□ -1.27
EPHA4-204ENST00000415749 SEMA5AQ13591 1074 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 ELF2Q15723 593 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 CCL15Q16663 113 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 UAP1L1Q3KQV9 507 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 TUBB8Q3ZCM7 444 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 CCDC152Q4G0S7 254 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 DARS2Q6PI48 645 aaKnown RBP7.09□□□□□ -1.27
EPHA4-204ENST00000415749 CCDC174Q6PII3 467 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 ANKRD18AQ8IVF6 992 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 FAM26EQ8N5C1 309 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 ASB15Q8WXK1 588 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 BRI3BPQ8WY22 251 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 CCT6BQ92526 530 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 OPTNQ96CV9 577 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 MVB12AQ96EY5 273 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 ACAP3Q96P50 834 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 INO80BQ9C086 356 aaPredicted RBP7.09□□□□□ -1.27
EPHA4-204ENST00000415749 COA1Q9GZY4 146 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 BHMT2Q9H2M3 363 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 ZMAT4Q9H898 229 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 GCM1Q9NP62 436 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 DLL4Q9NR61 685 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 RTEL1Q9NZ71 1219 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 NRBP1Q9UHY1 535 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 KDM3BQ7LBC6 1761 aa7.09□□□□□ -1.27
EPHA4-204ENST00000415749 DDX60Q8IY21 1712 aaKnown RBP7.09□□□□□ -1.27
EPHA4-204ENST00000415749 RANBP2P49792 3224 aaKnown RBP7.08□□□□□ -1.28
EPHA4-204ENST00000415749 TCAF2A6NFQ2 919 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 ZNF839A8K0R7 811 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 FAM227AF5H4B4 570 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 ETV2O00321 342 aaPredicted RBP7.08□□□□□ -1.28
EPHA4-204ENST00000415749 TLR2O60603 784 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 NDUFS2O75306 463 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 CYP7B1O75881 506 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 MED14OSP0DP75 135 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 PDCP20941 246 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 PTGS1P23219 599 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 PTX3P26022 381 aaPredicted RBP7.08□□□□□ -1.28
EPHA4-204ENST00000415749 HOXD10P28358 340 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 CCT5P48643 541 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 PDCD2Q16342 344 aaPredicted RBP7.08□□□□□ -1.28
EPHA4-204ENST00000415749 DENND1CQ8IV53 801 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 SLC41A1Q8IVJ1 513 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 BHLHE22Q8NFJ8 381 aaPredicted RBP7.08□□□□□ -1.28
EPHA4-204ENST00000415749 DEPTORQ8TB45 409 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 RAET1EQ8TD07 263 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 IGDCC4Q8TDY8 1250 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 SSH1Q8WYL5 1049 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 C1GALT1C1Q96EU7 318 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 MPP4Q96JB8 637 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 NEUROD6Q96NK8 337 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 CLIC6Q96NY7 704 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 QRSL1Q9H0R6 528 aaKnown RBP7.08□□□□□ -1.28
EPHA4-204ENST00000415749 TMEM60Q9H2L4 133 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 USP36Q9P275 1121 aaKnown RBP7.08□□□□□ -1.28
EPHA4-204ENST00000415749 SRRDQ9UH36 339 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 SERPINB13Q9UIV8 391 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 LRCH1Q9Y2L9 728 aa7.08□□□□□ -1.28
EPHA4-204ENST00000415749 ZNF804BA4D1E1 1349 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms