RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 ERICH2A1L162 156 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 CYSRT1A8MQ03 144 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 ZNF217O75362 1048 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 THP07101 528 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 OPRD1P41143 372 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 TRAPPC10P48553 1259 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 TMEM62Q0P6H9 643 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 MAPK6Q16659 721 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 UBE2SQ16763 222 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 TTC22Q5TAA0 569 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 ZSCAN18Q8TBC5 510 aaPredicted RBP6.76□□□□□ -1.33
LMBR1-204ENST00000415428 SPIRE2Q8WWL2 714 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 PRPF31Q8WWY3 499 aaKnown RBP6.76□□□□□ -1.33
LMBR1-204ENST00000415428 MTRQ99707 1265 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 CLMPQ9H6B4 373 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 C6orf50Q9HD87 102 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 STARD5Q9NSY2 213 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 ARHGAP28Q9P2N2 729 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 WRAP73Q9P2S5 460 aaPredicted RBP6.76□□□□□ -1.33
LMBR1-204ENST00000415428 CHD6Q8TD26 2715 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 CAPN9O14815 690 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 IFIT3O14879 490 aaKnown RBP6.76□□□□□ -1.33
LMBR1-204ENST00000415428 STAU1O95793 577 aaKnown RBP6.76□□□□□ -1.33
LMBR1-204ENST00000415428 ITGB2P05107 769 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 MLH1P40692 756 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 USP39Q53GS9 565 aaKnown RBP6.76□□□□□ -1.33
LMBR1-204ENST00000415428 TWF2Q6IBS0 349 aaKnown RBP6.76□□□□□ -1.33
LMBR1-204ENST00000415428 CATSPER4Q7RTX7 472 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 SLFN12Q8IYM2 578 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 CPA6Q8N4T0 437 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 DCBLD1Q8N8Z6 715 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 RUFY2Q8WXA3 655 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 HAS1Q92839 578 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 CD101Q93033 1021 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 RNF39Q9H2S5 420 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 TRIOO75962 3097 aa6.76□□□□□ -1.33
LMBR1-204ENST00000415428 NT5C1B-RDH14C9J2C7 533 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 GIPC1O14908 333 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 HAPLN1P10915 354 aaPredicted RBP6.75□□□□□ -1.33
LMBR1-204ENST00000415428 ENGP17813 658 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 SCNN1GP51170 649 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 ERVPABLB-1P60509 514 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 PDZD4Q76G19 769 aaPredicted RBP6.75□□□□□ -1.33
LMBR1-204ENST00000415428 CYP2U1Q7Z449 544 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 CLEC14AQ86T13 490 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 MCPH1Q8NEM0 835 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 NXPE2Q96DL1 559 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 ORAI3Q9BRQ5 295 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 APOL5Q9BWW9 433 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 ASAH2Q9NR71 780 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 GPR27Q9NS67 375 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 PCDHA4Q9UN74 947 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 SMCO2A6NFE2 343 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 TADA3O75528 432 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 IGHDP01880 384 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 GDI1P31150 447 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 NUDT1P36639 197 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 IGBP1P78318 339 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 MCL1Q07820 350 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 CASC1Q6TDU7 716 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 ZPBP2Q6X784 338 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 GAREM2Q75VX8 874 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 CXorf38Q8TB03 319 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 MED8Q96G25 268 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 ZNF578Q96N58 590 aaPredicted RBP6.75□□□□□ -1.33
LMBR1-204ENST00000415428 ZKSCAN3Q9BRR0 538 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 NUSAP1Q9BXS6 441 aaKnown RBP6.75□□□□□ -1.33
LMBR1-204ENST00000415428 ZSWIM4Q9H7M6 989 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 PIDD1Q9HB75 910 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 HCFC1R1Q9NWW0 138 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 KCND2Q9NZV8 630 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 SLC8A2Q9UPR5 921 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 SPEGQ15772 3267 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 CCDC196A0A1B0GTZ2 297 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 FTH1P19P0C7X4 201 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 NTHL1P78549 312 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 EOGTQ5NDL2 527 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 SYNE3Q6ZMZ3 975 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 WHAMMQ8TF30 809 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 ATP2A3Q93084 1043 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 FUBP3Q96I24 572 aaKnown RBP eCLIP6.75□□□□□ -1.33
LMBR1-204ENST00000415428 FNBP1Q96RU3 617 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 GAD1Q99259 594 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 HINFPQ9BQA5 517 aa6.75□□□□□ -1.33
LMBR1-204ENST00000415428 CXorf51AA0A1B0GTR3 108 aa6.74□□□□□ -1.33
LMBR1-204ENST00000415428 B8ZZF3 427 aa6.74□□□□□ -1.33
LMBR1-204ENST00000415428 PIRO00625 290 aa6.74□□□□□ -1.33
LMBR1-204ENST00000415428 CCL16O15467 120 aa6.74□□□□□ -1.33
LMBR1-204ENST00000415428 TNFSF14O43557 240 aa6.74□□□□□ -1.33
LMBR1-204ENST00000415428 CCNE1P24864 410 aa6.74□□□□□ -1.33
LMBR1-204ENST00000415428 HARS2P49590 506 aaKnown RBP6.74□□□□□ -1.33
LMBR1-204ENST00000415428 BNC1Q01954 994 aa6.74□□□□□ -1.33
LMBR1-204ENST00000415428 DMC1Q14565 340 aa6.74□□□□□ -1.33
LMBR1-204ENST00000415428 ZNF280DQ6N043 979 aa6.74□□□□□ -1.33
LMBR1-204ENST00000415428 NFXL1Q6ZNB6 911 aa6.74□□□□□ -1.33
LMBR1-204ENST00000415428 LPCAT2Q7L5N7 544 aa6.74□□□□□ -1.33
LMBR1-204ENST00000415428 DDX42Q86XP3 938 aaKnown RBP eCLIP6.74□□□□□ -1.332e-6■□□□□ 9.8
LMBR1-204ENST00000415428 CMTM8Q8IZV2 173 aa6.74□□□□□ -1.33
LMBR1-204ENST00000415428 REXO1Q8N1G1 1221 aaKnown RBP6.74□□□□□ -1.33
LMBR1-204ENST00000415428 ELMOD1Q8N336 334 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms