RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 PRKD2Q9BZL6 878 aa15.84■□□□□ 0.13
CHD1-202ENST00000414220 TIMM13Q9Y5L4 95 aaPredicted RBP15.84■□□□□ 0.13
CHD1-202ENST00000414220 PRUNE2Q8WUY3 3088 aa15.84■□□□□ 0.13
CHD1-202ENST00000414220 ATG2AQ2TAZ0 1938 aa15.84■□□□□ 0.13
CHD1-202ENST00000414220 PPEF2O14830 753 aa15.83■□□□□ 0.12
CHD1-202ENST00000414220 TBC1D4O60343 1298 aa15.83■□□□□ 0.12
CHD1-202ENST00000414220 LRG1P02750 347 aa15.83■□□□□ 0.12
CHD1-202ENST00000414220 ATF2P15336 505 aa15.83■□□□□ 0.12
CHD1-202ENST00000414220 HOXA9P31269 272 aa15.83■□□□□ 0.12
CHD1-202ENST00000414220 ZP2Q05996 745 aa15.83■□□□□ 0.12
CHD1-202ENST00000414220 SMARCB1Q12824 385 aa15.83■□□□□ 0.12
CHD1-202ENST00000414220 BIRC3Q13489 604 aa15.83■□□□□ 0.12
CHD1-202ENST00000414220 LMBRD2Q68DH5 695 aaPredicted RBP15.83■□□□□ 0.12
CHD1-202ENST00000414220 CLEC17AQ6ZS10 378 aa15.83■□□□□ 0.12
CHD1-202ENST00000414220 DPH6Q7L8W6 267 aa15.83■□□□□ 0.12
CHD1-202ENST00000414220 TMEM86AQ8N2M4 240 aa15.83■□□□□ 0.12
CHD1-202ENST00000414220 ELMOD1Q8N336 334 aa15.83■□□□□ 0.12
CHD1-202ENST00000414220 PLCD3Q8N3E9 789 aa15.83■□□□□ 0.12
CHD1-202ENST00000414220 SPATA18Q8TC71 538 aa15.83■□□□□ 0.12
CHD1-202ENST00000414220 TMC2Q8TDI7 906 aa15.83■□□□□ 0.12
CHD1-202ENST00000414220 HPDLQ96IR7 371 aa15.83■□□□□ 0.12
CHD1-202ENST00000414220 RPGRIP1Q96KN7 1286 aa15.83■□□□□ 0.12
CHD1-202ENST00000414220 CYP4F11Q9HBI6 524 aa15.83■□□□□ 0.12
CHD1-202ENST00000414220 AFF4Q9UHB7 1163 aaKnown RBP15.83■□□□□ 0.12
CHD1-202ENST00000414220 SNX9Q9Y5X1 595 aa15.83■□□□□ 0.12
CHD1-202ENST00000414220 IKBKBO14920 756 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 SPTLC1O15269 473 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 ADAM12O43184 909 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 RFPL2O75678 378 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 ABLIM3O94929 683 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 EPB41P11171 864 aaKnown RBP15.82■□□□□ 0.12
CHD1-202ENST00000414220 ATICP31939 592 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 PRCPP42785 496 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 WNT7BP56706 349 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 MYL7Q01449 175 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 TSPY1Q01534 308 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 LRRC63Q05C16 580 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 ENPEPQ07075 957 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 PLD1Q13393 1074 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 OTOP3Q7RTS5 596 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 DCP1BQ8IZD4 617 aaKnown RBP15.82■□□□□ 0.12
CHD1-202ENST00000414220 TOP6BLQ8N6T0 577 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 TRIML1Q8N9V2 468 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 OR5B17Q8NGF7 314 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 SLC7A14Q8TBB6 771 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 PARD3BQ8TEW8 1205 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 SYAP1Q96A49 352 aaPredicted RBP15.82■□□□□ 0.12
CHD1-202ENST00000414220 DHTKD1Q96HY7 919 aaPredicted RBP15.82■□□□□ 0.12
CHD1-202ENST00000414220 NECAB3Q96P71 396 aaPredicted RBP15.82■□□□□ 0.12
CHD1-202ENST00000414220 MKNK1Q9BUB5 465 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 TSHZ2Q9NRE2 1034 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 GDAP2Q9NXN4 497 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 POLIQ9UNA4 740 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 USTQ9Y2C2 406 aa15.82■□□□□ 0.12
CHD1-202ENST00000414220 BICDL2A1A5D9 508 aa15.81■□□□□ 0.12
CHD1-202ENST00000414220 WDR27A2RRH5 827 aa15.81■□□□□ 0.12
CHD1-202ENST00000414220 STX10O60499 249 aa15.81■□□□□ 0.12
CHD1-202ENST00000414220 POU2F2P09086 479 aa15.81■□□□□ 0.12
CHD1-202ENST00000414220 LHX1P48742 406 aa15.81■□□□□ 0.12
CHD1-202ENST00000414220 VAMP7P51809 220 aa15.81■□□□□ 0.12
CHD1-202ENST00000414220 TNNC1P63316 161 aa15.81■□□□□ 0.12
CHD1-202ENST00000414220 FKBP3Q00688 224 aaKnown RBP15.81■□□□□ 0.12
CHD1-202ENST00000414220 GPR17Q13304 367 aa15.81■□□□□ 0.12
CHD1-202ENST00000414220 IQCEQ6IPM2 695 aa15.81■□□□□ 0.12
CHD1-202ENST00000414220 CENPPQ6IPU0 288 aa15.81■□□□□ 0.12
CHD1-202ENST00000414220 RSPO2Q6UXX9 243 aaPredicted RBP15.81■□□□□ 0.12
CHD1-202ENST00000414220 FAM186BQ8IYM0 893 aa15.81■□□□□ 0.12
CHD1-202ENST00000414220 TCEAL8Q8IYN2 117 aa15.81■□□□□ 0.12
CHD1-202ENST00000414220 SMYD4Q8IYR2 804 aaPredicted RBP15.81■□□□□ 0.12
CHD1-202ENST00000414220 ADSSL1Q8N142 457 aa15.81■□□□□ 0.12
CHD1-202ENST00000414220 C2orf15Q8WU43 125 aaKnown RBP15.81■□□□□ 0.12
CHD1-202ENST00000414220 ERCC4Q92889 916 aaPredicted RBP15.81■□□□□ 0.12
CHD1-202ENST00000414220 BORCS6Q96GS4 357 aa15.81■□□□□ 0.12
CHD1-202ENST00000414220 MMS19Q96T76 1030 aa15.81■□□□□ 0.12
CHD1-202ENST00000414220 POMKQ9H5K3 350 aa15.81■□□□□ 0.12
CHD1-202ENST00000414220 BRWD1Q9NSI6 2320 aa15.81■□□□□ 0.12
CHD1-202ENST00000414220 MAN1B1Q9UKM7 699 aa15.81■□□□□ 0.12
CHD1-202ENST00000414220 PDCD11Q14690 1871 aaKnown RBP15.8■□□□□ 0.12
CHD1-202ENST00000414220 C19orf67A6NJJ6 358 aa15.8■□□□□ 0.12
CHD1-202ENST00000414220 WEE2P0C1S8 567 aa15.8■□□□□ 0.12
CHD1-202ENST00000414220 FAM163BP0C2L3 166 aa15.8■□□□□ 0.12
CHD1-202ENST00000414220 P4HA1P13674 534 aa15.8■□□□□ 0.12
CHD1-202ENST00000414220 ALADP13716 330 aa15.8■□□□□ 0.12
CHD1-202ENST00000414220 ADCY1Q08828 1119 aa15.8■□□□□ 0.12
CHD1-202ENST00000414220 WSCD1Q658N2 575 aa15.8■□□□□ 0.12
CHD1-202ENST00000414220 ISM2Q6H9L7 571 aa15.8■□□□□ 0.12
CHD1-202ENST00000414220 TMEM130Q8N3G9 435 aa15.8■□□□□ 0.12
CHD1-202ENST00000414220 TDRD5Q8NAT2 981 aaKnown RBP15.8■□□□□ 0.12
CHD1-202ENST00000414220 CCDC150Q8NCX0 1101 aa15.8■□□□□ 0.12
CHD1-202ENST00000414220 IMPG2Q9BZV3 1241 aa15.8■□□□□ 0.12
CHD1-202ENST00000414220 WDR6Q9NNW5 1121 aaKnown RBP15.8■□□□□ 0.12
CHD1-202ENST00000414220 LRRIQ3A6PVS8 624 aaPredicted RBP15.79■□□□□ 0.12
CHD1-202ENST00000414220 LOC730098B7Z3J9 87 aa15.79■□□□□ 0.12
CHD1-202ENST00000414220 CCL16O15467 120 aa15.79■□□□□ 0.12
CHD1-202ENST00000414220 PAPLNO95428 1278 aa15.79■□□□□ 0.12
CHD1-202ENST00000414220 FGFR1OPO95684 399 aaKnown RBP15.79■□□□□ 0.12
CHD1-202ENST00000414220 PTPN2P17706 415 aa15.79■□□□□ 0.12
CHD1-202ENST00000414220 TRIM21P19474 475 aaKnown RBP15.79■□□□□ 0.12
CHD1-202ENST00000414220 CCNE1P24864 410 aa15.79■□□□□ 0.12
CHD1-202ENST00000414220 PCSK1P29120 753 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms