RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 FAM3CQ92520 227 aa26.48■■□□□ 1.83
AC005540.1-201ENST00000413911 BORCS6Q96GS4 357 aa26.48■■□□□ 1.83
AC005540.1-201ENST00000413911 LRRC3BQ96PB8 259 aa26.48■■□□□ 1.83
AC005540.1-201ENST00000413911 FIZ1Q96SL8 496 aa26.48■■□□□ 1.83
AC005540.1-201ENST00000413911 MKNK1Q9BUB5 465 aa26.48■■□□□ 1.83
AC005540.1-201ENST00000413911 LMAN1LQ9HAT1 526 aa26.48■■□□□ 1.83
AC005540.1-201ENST00000413911 NCDNQ9UBB6 729 aa26.48■■□□□ 1.83
AC005540.1-201ENST00000413911 SMG5Q9UPR3 1016 aaKnown RBP26.48■■□□□ 1.83
AC005540.1-201ENST00000413911 KIF3AQ9Y496 699 aa26.48■■□□□ 1.83
AC005540.1-201ENST00000413911 A0A0B4J269 797 aa26.47■■□□□ 1.83
AC005540.1-201ENST00000413911 MTMR11A4FU01 709 aa26.47■■□□□ 1.83
AC005540.1-201ENST00000413911 OR6C75A6NL08 312 aa26.47■■□□□ 1.83
AC005540.1-201ENST00000413911 H0YCG3 227 aa26.47■■□□□ 1.83
AC005540.1-201ENST00000413911 HNRNPDLO14979 420 aaKnown RBP26.47■■□□□ 1.83
AC005540.1-201ENST00000413911 SOAT2O75908 522 aa26.47■■□□□ 1.83
AC005540.1-201ENST00000413911 LILRA4P59901 499 aa26.47■■□□□ 1.83
AC005540.1-201ENST00000413911 GAS6Q14393 721 aa26.47■■□□□ 1.83
AC005540.1-201ENST00000413911 PUM1Q14671 1186 aaKnown RBP eCLIP26.47■■□□□ 1.83
AC005540.1-201ENST00000413911 JADE1Q6IE81 842 aa26.47■■□□□ 1.83
AC005540.1-201ENST00000413911 USP37Q86T82 979 aa26.47■■□□□ 1.83
AC005540.1-201ENST00000413911 MYCT1Q8N699 235 aa26.47■■□□□ 1.83
AC005540.1-201ENST00000413911 RPF1Q9H9Y2 349 aaKnown RBP26.47■■□□□ 1.83
AC005540.1-201ENST00000413911 CPSF3Q9UKF6 684 aaKnown RBP26.47■■□□□ 1.83
AC005540.1-201ENST00000413911 K7ENM7 598 aa26.46■■□□□ 1.83
AC005540.1-201ENST00000413911 ZNF263O14978 683 aa26.46■■□□□ 1.83
AC005540.1-201ENST00000413911 CHRNB1P11230 501 aa26.46■■□□□ 1.83
AC005540.1-201ENST00000413911 TYMPP19971 482 aa26.46■■□□□ 1.83
AC005540.1-201ENST00000413911 TGM1P22735 817 aa26.46■■□□□ 1.83
AC005540.1-201ENST00000413911 CDR1P51861 262 aa26.46■■□□□ 1.83
AC005540.1-201ENST00000413911 MCM6Q14566 821 aa26.46■■□□□ 1.83
AC005540.1-201ENST00000413911 RSPO4Q2I0M5 234 aaPredicted RBP26.46■■□□□ 1.83
AC005540.1-201ENST00000413911 WDR44Q5JSH3 913 aa26.46■■□□□ 1.83
AC005540.1-201ENST00000413911 OVOS1Q6IE37 1185 aa26.46■■□□□ 1.83
AC005540.1-201ENST00000413911 MAMSTRQ6ZN01 415 aa26.46■■□□□ 1.83
AC005540.1-201ENST00000413911 GAREM2Q75VX8 874 aa26.46■■□□□ 1.83
AC005540.1-201ENST00000413911 FAM212AQ96EL1 285 aa26.46■■□□□ 1.83
AC005540.1-201ENST00000413911 SENP8Q96LD8 212 aa26.46■■□□□ 1.83
AC005540.1-201ENST00000413911 OXCT2Q9BYC2 517 aaPredicted RBP26.46■■□□□ 1.83
AC005540.1-201ENST00000413911 SLITRK6Q9H5Y7 841 aa26.46■■□□□ 1.83
AC005540.1-201ENST00000413911 TISP43B9A030 160 aa26.45■■□□□ 1.82
AC005540.1-201ENST00000413911 ANKRD63C9JTQ0 380 aa26.45■■□□□ 1.82
AC005540.1-201ENST00000413911 H3BQV1 296 aa26.45■■□□□ 1.82
AC005540.1-201ENST00000413911 NFICP08651 508 aa26.45■■□□□ 1.82
AC005540.1-201ENST00000413911 CCNE1P24864 410 aa26.45■■□□□ 1.82
AC005540.1-201ENST00000413911 OR10T2Q8NGX3 314 aa26.45■■□□□ 1.82
AC005540.1-201ENST00000413911 AK8Q96MA6 479 aa26.45■■□□□ 1.82
AC005540.1-201ENST00000413911 MSTO1Q9BUK6 570 aa26.45■■□□□ 1.82
AC005540.1-201ENST00000413911 ANK1P16157 1881 aa26.45■■□□□ 1.82
AC005540.1-201ENST00000413911 TSC2P49815 1807 aa26.44■■□□□ 1.82
AC005540.1-201ENST00000413911 FAM13AO94988 1023 aa26.44■■□□□ 1.82
AC005540.1-201ENST00000413911 PLCG1P19174 1290 aa26.44■■□□□ 1.82
AC005540.1-201ENST00000413911 NMT1P30419 496 aaKnown RBP26.44■■□□□ 1.82
AC005540.1-201ENST00000413911 SOX9P48436 509 aa26.44■■□□□ 1.82
AC005540.1-201ENST00000413911 EPHB3P54753 998 aa26.44■■□□□ 1.82
AC005540.1-201ENST00000413911 MYBPC2Q14324 1141 aa26.44■■□□□ 1.82
AC005540.1-201ENST00000413911 KARSQ15046 597 aaKnown RBP26.44■■□□□ 1.82
AC005540.1-201ENST00000413911 KYAT1Q16773 422 aa26.44■■□□□ 1.82
AC005540.1-201ENST00000413911 C9orf57Q5W0N0 161 aa26.44■■□□□ 1.82
AC005540.1-201ENST00000413911 DNAJB7Q7Z6W7 309 aaPredicted RBP26.44■■□□□ 1.82
AC005540.1-201ENST00000413911 GPR88Q9GZN0 384 aa26.44■■□□□ 1.82
AC005540.1-201ENST00000413911 IKZF4Q9H2S9 585 aa26.44■■□□□ 1.82
AC005540.1-201ENST00000413911 PARVGQ9HBI0 331 aa26.44■■□□□ 1.82
AC005540.1-201ENST00000413911 PIRO00625 290 aa26.43■■□□□ 1.82
AC005540.1-201ENST00000413911 TRAK2O60296 914 aa26.43■■□□□ 1.82
AC005540.1-201ENST00000413911 UBA7P41226 1012 aa26.43■■□□□ 1.82
AC005540.1-201ENST00000413911 ALDH1A3P47895 512 aa26.43■■□□□ 1.82
AC005540.1-201ENST00000413911 FCHO2Q0JRZ9 810 aa26.43■■□□□ 1.82
AC005540.1-201ENST00000413911 PLD1Q13393 1074 aa26.43■■□□□ 1.82
AC005540.1-201ENST00000413911 ARID3BQ8IVW6 561 aaPredicted RBP26.43■■□□□ 1.82
AC005540.1-201ENST00000413911 RAD54LQ92698 747 aa26.43■■□□□ 1.82
AC005540.1-201ENST00000413911 CALML4Q96GE6 196 aa26.43■■□□□ 1.82
AC005540.1-201ENST00000413911 FAM126AQ9BYI3 521 aaPredicted RBP26.43■■□□□ 1.82
AC005540.1-201ENST00000413911 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.43■■□□□ 1.82
AC005540.1-201ENST00000413911 ANO9A1A5B4 782 aa26.42■■□□□ 1.82
AC005540.1-201ENST00000413911 SLC26A4O43511 780 aa26.42■■□□□ 1.82
AC005540.1-201ENST00000413911 XPOTO43592 962 aaKnown RBP26.42■■□□□ 1.82
AC005540.1-201ENST00000413911 ACOT2P49753 483 aa26.42■■□□□ 1.82
AC005540.1-201ENST00000413911 GTF2BQ00403 316 aa26.42■■□□□ 1.82
AC005540.1-201ENST00000413911 SATB1Q01826 763 aa26.42■■□□□ 1.82
AC005540.1-201ENST00000413911 ZC2HC1CQ53FD0 456 aaPredicted RBP26.42■■□□□ 1.82
AC005540.1-201ENST00000413911 PSMG2Q969U7 264 aa26.42■■□□□ 1.82
AC005540.1-201ENST00000413911 TSPAN18Q96SJ8 248 aa26.42■■□□□ 1.82
AC005540.1-201ENST00000413911 PARD6AQ9NPB6 346 aa26.42■■□□□ 1.82
AC005540.1-201ENST00000413911 RBM12Q9NTZ6 932 aaKnown RBP26.42■■□□□ 1.82
AC005540.1-201ENST00000413911 SCN1AP35498 2009 aa26.41■■□□□ 1.82
AC005540.1-201ENST00000413911 SLC38A8A6NNN8 435 aa26.41■■□□□ 1.82
AC005540.1-201ENST00000413911 CHADO15335 359 aa26.41■■□□□ 1.82
AC005540.1-201ENST00000413911 ODC1P11926 461 aa26.41■■□□□ 1.82
AC005540.1-201ENST00000413911 TXNDC11Q6PKC3 985 aa26.41■■□□□ 1.82
AC005540.1-201ENST00000413911 TTC8Q8TAM2 541 aa26.41■■□□□ 1.82
AC005540.1-201ENST00000413911 E2F7Q96AV8 911 aa26.41■■□□□ 1.82
AC005540.1-201ENST00000413911 ZFYVE19Q96K21 471 aa26.41■■□□□ 1.82
AC005540.1-201ENST00000413911 LPIN3Q9BQK8 851 aa26.41■■□□□ 1.82
AC005540.1-201ENST00000413911 ZHX3Q9H4I2 956 aa26.41■■□□□ 1.82
AC005540.1-201ENST00000413911 CYP11A1P05108 521 aa26.4■■□□□ 1.82
AC005540.1-201ENST00000413911 HOXC13P31276 330 aa26.4■■□□□ 1.82
AC005540.1-201ENST00000413911 MLLT6P55198 1093 aaPredicted RBP26.4■■□□□ 1.82
AC005540.1-201ENST00000413911 DMWDQ09019 674 aa26.4■■□□□ 1.82
AC005540.1-201ENST00000413911 TMEM132DQ14C87 1099 aa26.4■■□□□ 1.82
AC005540.1-201ENST00000413911 LPAL2Q16609 132 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms