RNA–Protein interactions for RNA: ENST00000412827.6

PUDP-202, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 1,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-202ENST00000412827 DESI2Q9BSY9 194 aa16.21■□□□□ 0.19
PUDP-202ENST00000412827 VRTNQ9H8Y1 702 aa16.21■□□□□ 0.19
PUDP-202ENST00000412827 RNF19AQ9NV58 838 aa16.21■□□□□ 0.19
PUDP-202ENST00000412827 TBC1D13Q9NVG8 400 aa16.21■□□□□ 0.19
PUDP-202ENST00000412827 R3HCC1Q9Y3T6 440 aaKnown RBP16.21■□□□□ 0.19
PUDP-202ENST00000412827 KIF5CO60282 957 aa16.2■□□□□ 0.18
PUDP-202ENST00000412827 POMCP01189 267 aa16.2■□□□□ 0.18
PUDP-202ENST00000412827 CYP3A5P20815 502 aa16.2■□□□□ 0.18
PUDP-202ENST00000412827 MAGEA1P43355 309 aa16.2■□□□□ 0.18
PUDP-202ENST00000412827 YWHAEP62258 255 aaKnown RBP16.2■□□□□ 0.18
PUDP-202ENST00000412827 PTK2Q05397 1052 aa16.2■□□□□ 0.18
PUDP-202ENST00000412827 KIF5AQ12840 1032 aa16.2■□□□□ 0.18
PUDP-202ENST00000412827 TUSC3Q13454 348 aa16.2■□□□□ 0.18
PUDP-202ENST00000412827 ARHGAP44Q17R89 818 aa16.2■□□□□ 0.18
PUDP-202ENST00000412827 TMCO2Q7Z6W1 182 aaPredicted RBP16.2■□□□□ 0.18
PUDP-202ENST00000412827 ZNF677Q86XU0 584 aa16.2■□□□□ 0.18
PUDP-202ENST00000412827 TTC39CQ8N584 583 aa16.2■□□□□ 0.18
PUDP-202ENST00000412827 ACRBPQ8NEB7 543 aa16.2■□□□□ 0.18
PUDP-202ENST00000412827 KIF18AQ8NI77 898 aa16.2■□□□□ 0.18
PUDP-202ENST00000412827 C16orf45Q96MC5 204 aaPredicted RBP16.2■□□□□ 0.18
PUDP-202ENST00000412827 KREMEN1Q96MU8 473 aa16.2■□□□□ 0.18
PUDP-202ENST00000412827 UROC1Q96N76 676 aa16.2■□□□□ 0.18
PUDP-202ENST00000412827 SAMD11Q96NU1 681 aa16.2■□□□□ 0.18
PUDP-202ENST00000412827 TMEM175Q9BSA9 504 aa16.2■□□□□ 0.18
PUDP-202ENST00000412827 AJAP1Q9UKB5 411 aaPredicted RBP16.2■□□□□ 0.18
PUDP-202ENST00000412827 ITGA11Q9UKX5 1188 aa16.2■□□□□ 0.18
PUDP-202ENST00000412827 CNTN6Q9UQ52 1028 aa16.2■□□□□ 0.18
PUDP-202ENST00000412827 REXO2Q9Y3B8 237 aaKnown RBP16.2■□□□□ 0.18
PUDP-202ENST00000412827 PCDHA13Q9Y5I0 950 aa16.2■□□□□ 0.18
PUDP-202ENST00000412827 SMIM28A0A1B0GU29 152 aa16.19■□□□□ 0.18
PUDP-202ENST00000412827 PTGESO14684 152 aa16.19■□□□□ 0.18
PUDP-202ENST00000412827 PLEKP08567 350 aaPredicted RBP16.19■□□□□ 0.18
PUDP-202ENST00000412827 PPM1AP35813 382 aa16.19■□□□□ 0.18
PUDP-202ENST00000412827 GATMP50440 423 aa16.19■□□□□ 0.18
PUDP-202ENST00000412827 NOP14P78316 857 aaKnown RBP16.19■□□□□ 0.18
PUDP-202ENST00000412827 TFAMQ00059 246 aaKnown RBP16.19■□□□□ 0.18
PUDP-202ENST00000412827 CUL2Q13617 745 aa16.19■□□□□ 0.18
PUDP-202ENST00000412827 NAB2Q15742 525 aa16.19■□□□□ 0.18
PUDP-202ENST00000412827 LRIT3Q3SXY7 679 aa16.19■□□□□ 0.18
PUDP-202ENST00000412827 GLRA4Q5JXX5 417 aa16.19■□□□□ 0.18
PUDP-202ENST00000412827 ALKAL1Q6UXT8 129 aa16.19■□□□□ 0.18
PUDP-202ENST00000412827 ZNF571Q7Z3V5 609 aaPredicted RBP16.19■□□□□ 0.18
PUDP-202ENST00000412827 EFCAB13Q8IY85 973 aa16.19■□□□□ 0.18
PUDP-202ENST00000412827 DDX27Q96GQ7 796 aaKnown RBP16.19■□□□□ 0.18
PUDP-202ENST00000412827 PPP1R10Q96QC0 940 aaKnown RBP16.19■□□□□ 0.18
PUDP-202ENST00000412827 SYT11Q9BT88 431 aa16.19■□□□□ 0.18
PUDP-202ENST00000412827 MTMR12Q9C0I1 747 aa16.19■□□□□ 0.18
PUDP-202ENST00000412827 COLQQ9Y215 455 aaPredicted RBP16.19■□□□□ 0.18
PUDP-202ENST00000412827 BTNL10A8MVZ5 291 aa16.18■□□□□ 0.18
PUDP-202ENST00000412827 P4HA1P13674 534 aa16.18■□□□□ 0.18
PUDP-202ENST00000412827 ARID5AQ03989 594 aa16.18■□□□□ 0.18
PUDP-202ENST00000412827 LMBRD2Q68DH5 695 aaPredicted RBP16.18■□□□□ 0.18
PUDP-202ENST00000412827 JADE1Q6IE81 842 aa16.18■□□□□ 0.18
PUDP-202ENST00000412827 PPP1R2P3Q6NXS1 205 aa16.18■□□□□ 0.18
PUDP-202ENST00000412827 RNF10Q8N5U6 811 aaKnown RBP16.18■□□□□ 0.18
PUDP-202ENST00000412827 SLC30A5Q8TAD4 765 aa16.18■□□□□ 0.18
PUDP-202ENST00000412827 TATDN2Q93075 761 aa16.18■□□□□ 0.18
PUDP-202ENST00000412827 CALR3Q96L12 384 aaKnown RBP16.18■□□□□ 0.18
PUDP-202ENST00000412827 ZNF558Q96NG5 402 aa16.18■□□□□ 0.18
PUDP-202ENST00000412827 NIF3L1Q9GZT8 377 aa16.18■□□□□ 0.18
PUDP-202ENST00000412827 STK39Q9UEW8 545 aa16.18■□□□□ 0.18
PUDP-202ENST00000412827 NENFQ9UMX5 172 aa16.18■□□□□ 0.18
PUDP-202ENST00000412827 PCDHB12Q9Y5F1 795 aa16.18■□□□□ 0.18
PUDP-202ENST00000412827 PDCD11Q14690 1871 aaKnown RBP16.18■□□□□ 0.18
PUDP-202ENST00000412827 ZNF263O14978 683 aa16.17■□□□□ 0.18
PUDP-202ENST00000412827 CA3P07451 260 aa16.17■□□□□ 0.18
PUDP-202ENST00000412827 NFICP08651 508 aa16.17■□□□□ 0.18
PUDP-202ENST00000412827 TNFAIP3P21580 790 aa16.17■□□□□ 0.18
PUDP-202ENST00000412827 PAX3P23760 479 aa16.17■□□□□ 0.18
PUDP-202ENST00000412827 RPL9P32969 192 aaKnown RBP16.17■□□□□ 0.18
PUDP-202ENST00000412827 ARHGAP25P42331 645 aa16.17■□□□□ 0.18
PUDP-202ENST00000412827 ALDH7A1P49419 539 aaKnown RBP16.17■□□□□ 0.18
PUDP-202ENST00000412827 RABGGTBP53611 331 aa16.17■□□□□ 0.18
PUDP-202ENST00000412827 RBP5P82980 135 aa16.17■□□□□ 0.18
PUDP-202ENST00000412827 DSC1Q08554 894 aa16.17■□□□□ 0.18
PUDP-202ENST00000412827 PPP2R2DQ66LE6 453 aa16.17■□□□□ 0.18
PUDP-202ENST00000412827 GSTCDQ8NEC7 633 aa16.17■□□□□ 0.18
PUDP-202ENST00000412827 UBE2Q2Q8WVN8 375 aa16.17■□□□□ 0.18
PUDP-202ENST00000412827 AGPAT1Q99943 283 aa16.17■□□□□ 0.18
PUDP-202ENST00000412827 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.17■□□□□ 0.18
PUDP-202ENST00000412827 PBX4Q9BYU1 374 aa16.17■□□□□ 0.18
PUDP-202ENST00000412827 SLC28A3Q9HAS3 691 aa16.17■□□□□ 0.18
PUDP-202ENST00000412827 CYP3A43Q9HB55 503 aa16.17■□□□□ 0.18
PUDP-202ENST00000412827 ADAMTS1Q9UHI8 967 aa16.17■□□□□ 0.18
PUDP-202ENST00000412827 NAGPAQ9UK23 515 aa16.17■□□□□ 0.18
PUDP-202ENST00000412827 MRPL42Q9Y6G3 142 aaKnown RBP16.17■□□□□ 0.18
PUDP-202ENST00000412827 PTPRSQ13332 1948 aa16.17■□□□□ 0.18
PUDP-202ENST00000412827 TNRC18O15417 2968 aaPredicted RBP16.17■□□□□ 0.18
PUDP-202ENST00000412827 TMEM265A0A087WTH1 108 aa16.16■□□□□ 0.18
PUDP-202ENST00000412827 A0A087X0T9 212 aa16.16■□□□□ 0.18
PUDP-202ENST00000412827 GRXCR1A8MXD5 290 aa16.16■□□□□ 0.18
PUDP-202ENST00000412827 FAM228BP0C875 321 aa16.16■□□□□ 0.18
PUDP-202ENST00000412827 GZMAP12544 262 aa16.16■□□□□ 0.18
PUDP-202ENST00000412827 DNAJB2P25686 324 aa16.16■□□□□ 0.18
PUDP-202ENST00000412827 GFPT1Q06210 699 aaPredicted RBP16.16■□□□□ 0.18
PUDP-202ENST00000412827 TUBB2AQ13885 445 aa16.16■□□□□ 0.18
PUDP-202ENST00000412827 ZBTB6Q15916 424 aa16.16■□□□□ 0.18
PUDP-202ENST00000412827 ZNF699Q32M78 642 aa16.16■□□□□ 0.18
PUDP-202ENST00000412827 CCDC122Q5T0U0 273 aa16.16■□□□□ 0.18
PUDP-202ENST00000412827 FAM109BQ6ICB4 259 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms