RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 CLDN10P78369 228 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 RBP5P82980 135 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 ROR1Q01973 937 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 YWHAHQ04917 246 aaPredicted RBP8.31□□□□□ -1.08
CPSF4-202ENST00000412686 LRRC63Q05C16 580 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 PPP3CAQ08209 521 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 PAK1Q13153 545 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 BIRC3Q13489 604 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 STIM1Q13586 685 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 MRPL58Q14197 206 aaKnown RBP8.31□□□□□ -1.08
CPSF4-202ENST00000412686 CCDC142Q17RM4 750 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 SV2CQ496J9 727 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 CTXN3Q4LDR2 81 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 WSCD1Q658N2 575 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 ANKRD54Q6NXT1 300 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 TMEM184AQ6ZMB5 413 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 OSTM1Q86WC4 334 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 TRIML1Q8N9V2 468 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 OR10T2Q8NGX3 314 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 CACTINQ8WUQ7 758 aaKnown RBP8.31□□□□□ -1.08
CPSF4-202ENST00000412686 CASP10Q92851 521 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 HPDLQ96IR7 371 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 ZNF560Q96MR9 790 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 TSG101Q99816 390 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 RTP3Q9BQQ7 232 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 MAN1C1Q9NR34 630 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 FNIP2Q9P278 1114 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 STK39Q9UEW8 545 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 FBXL5Q9UKA1 691 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 ITGA11Q9UKX5 1188 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 POLIQ9UNA4 740 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 COG5Q9UP83 839 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 SSX2IPQ9Y2D8 614 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 BOLA1Q9Y3E2 137 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 NME7Q9Y5B8 376 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 SNX9Q9Y5X1 595 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 BACE2Q9Y5Z0 518 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 C2orf16Q68DN1 1984 aa8.31□□□□□ -1.08
CPSF4-202ENST00000412686 MAPK13O15264 365 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 MBTPS2O43462 519 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 RFPL2O75678 378 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 MBD3O95983 291 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 EPB41P11171 864 aaKnown RBP8.3□□□□□ -1.08
CPSF4-202ENST00000412686 ODC1P11926 461 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 TYMPP19971 482 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 ACAT1P24752 427 aaKnown RBP8.3□□□□□ -1.08
CPSF4-202ENST00000412686 GCLMP48507 274 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 NLRP12P59046 1061 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 MYL6P60660 151 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 FKBP3Q00688 224 aaKnown RBP8.3□□□□□ -1.08
CPSF4-202ENST00000412686 RAB33AQ14088 237 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 LEXMQ3ZCV2 418 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 ZACNQ401N2 412 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 DCAF17Q5H9S7 520 aaPredicted RBP8.3□□□□□ -1.08
CPSF4-202ENST00000412686 RARS2Q5T160 578 aaKnown RBP8.3□□□□□ -1.08
CPSF4-202ENST00000412686 OVOS1Q6IE37 1185 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 SPOPLQ6IQ16 392 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 PTCRAQ6ISU1 281 aaPredicted RBP8.3□□□□□ -1.08
CPSF4-202ENST00000412686 ZNF280DQ6N043 979 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 LILRA6Q6PI73 481 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 TMC5Q6UXY8 1006 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 C15orf39Q6ZRI6 1047 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 RBM43Q6ZSC3 357 aaKnown RBP8.3□□□□□ -1.08
CPSF4-202ENST00000412686 ANKS3Q6ZW76 656 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 INTS8Q75QN2 995 aaKnown RBP8.3□□□□□ -1.08
CPSF4-202ENST00000412686 SV2AQ7L0J3 742 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 PDCL2Q8N4E4 241 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 LRRC52Q8N7C0 313 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 TMC2Q8TDI7 906 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 NECAB3Q96P71 396 aaPredicted RBP8.3□□□□□ -1.08
CPSF4-202ENST00000412686 PGLYRP2Q96PD5 576 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 ASB2Q96Q27 587 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 PI4K2AQ9BTU6 479 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 MKNK1Q9BUB5 465 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 XYLT2Q9H1B5 865 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 S1PR5Q9H228 398 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.3□□□□□ -1.08
CPSF4-202ENST00000412686 CD207Q9UJ71 328 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 FBXW11Q9UKB1 542 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 L1RE1Q9UN81 338 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.3□□□□□ -1.08
CPSF4-202ENST00000412686 TRANK1O15050 2925 aa8.3□□□□□ -1.08
CPSF4-202ENST00000412686 MTCL1Q9Y4B5 1905 aaKnown RBP8.3□□□□□ -1.08
CPSF4-202ENST00000412686 NCK2O43639 380 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 PHACTR2O75167 634 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 CLSTN1O94985 981 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 OAZ2O95190 189 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 SEC24AO95486 1093 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 VNN2O95498 520 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 HLA-DRAP01903 254 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 CYP11A1P05108 521 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 C8AP07357 584 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 BMP1P13497 986 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 KRT13P13646 458 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 SP100P23497 879 aaPredicted RBP8.29□□□□□ -1.08
CPSF4-202ENST00000412686 PPP1R2P41236 205 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 PNPLA4P41247 253 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 RAP1GAPP47736 663 aa8.29□□□□□ -1.08
CPSF4-202ENST00000412686 MRPS5P82675 430 aaKnown RBP8.29□□□□□ -1.08
CPSF4-202ENST00000412686 SMAD4Q13485 552 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms