RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 PLA2G2FQ9BZM2 168 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 FOXQ1Q9C009 403 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 CRISPLD1Q9H336 500 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 ASB7Q9H672 318 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 ARHGEF3Q9NR81 526 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 KCNH3Q9ULD8 1083 aa12.55□□□□□ -0.4
LINC00963-201ENST00000412141 NOTCH4Q99466 2003 aa12.54□□□□□ -0.4
LINC00963-201ENST00000412141 ANO9A1A5B4 782 aa12.54□□□□□ -0.4
LINC00963-201ENST00000412141 OR6C75A6NL08 312 aa12.54□□□□□ -0.4
LINC00963-201ENST00000412141 PIRO00625 290 aa12.54□□□□□ -0.4
LINC00963-201ENST00000412141 POLR2DO15514 142 aaKnown RBP12.54□□□□□ -0.4
LINC00963-201ENST00000412141 PPP6R2O75170 966 aa12.54□□□□□ -0.4
LINC00963-201ENST00000412141 VNN2O95498 520 aa12.54□□□□□ -0.4
LINC00963-201ENST00000412141 DCNP07585 359 aaKnown RBP12.54□□□□□ -0.4
LINC00963-201ENST00000412141 POU2F2P09086 479 aa12.54□□□□□ -0.4
LINC00963-201ENST00000412141 E2F4Q16254 413 aa12.54□□□□□ -0.4
LINC00963-201ENST00000412141 WSCD1Q658N2 575 aa12.54□□□□□ -0.4
LINC00963-201ENST00000412141 LMBRD2Q68DH5 695 aaPredicted RBP12.54□□□□□ -0.4
LINC00963-201ENST00000412141 SCARA3Q6AZY7 606 aa12.54□□□□□ -0.4
LINC00963-201ENST00000412141 TANGO2Q6ICL3 276 aa12.54□□□□□ -0.4
LINC00963-201ENST00000412141 RTL10Q7L3V2 364 aa12.54□□□□□ -0.4
LINC00963-201ENST00000412141 CHAMP1Q96JM3 812 aa12.54□□□□□ -0.4
LINC00963-201ENST00000412141 TSPAN18Q96SJ8 248 aa12.54□□□□□ -0.4
LINC00963-201ENST00000412141 BLZF1Q9H2G9 400 aa12.54□□□□□ -0.4
LINC00963-201ENST00000412141 SLITRK6Q9H5Y7 841 aa12.54□□□□□ -0.4
LINC00963-201ENST00000412141 OLFML3Q9NRN5 406 aa12.54□□□□□ -0.4
LINC00963-201ENST00000412141 RBAKQ9NYW8 714 aaPredicted RBP12.54□□□□□ -0.4
LINC00963-201ENST00000412141 AGAP1Q9UPQ3 857 aa12.54□□□□□ -0.4
LINC00963-201ENST00000412141 DERAQ9Y315 318 aa12.54□□□□□ -0.4
LINC00963-201ENST00000412141 YIPF1Q9Y548 306 aa12.54□□□□□ -0.4
LINC00963-201ENST00000412141 PDCD11Q14690 1871 aaKnown RBP12.54□□□□□ -0.4
LINC00963-201ENST00000412141 CFAP54Q96N23 3096 aa12.54□□□□□ -0.4
LINC00963-201ENST00000412141 ZNF197O14709 1029 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 LRRN2O75325 713 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 IL18RAPO95256 599 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 YEATS4O95619 227 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 KRT19P08727 400 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 TYMPP19971 482 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 CD72P21854 359 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 POLR2BP30876 1174 aaKnown RBP12.53□□□□□ -0.4
LINC00963-201ENST00000412141 AFMP43652 599 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 ALDH1A3P47895 512 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 TAF6P49848 677 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 DNM1Q05193 864 aaKnown RBP12.53□□□□□ -0.4
LINC00963-201ENST00000412141 BFSP1Q12934 665 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 GPR17Q13304 367 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 GRM2Q14416 872 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 SLC39A12Q504Y0 691 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 FAM78AQ5JUQ0 283 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 METTL23Q86XA0 190 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 GRAMD1CQ8IYS0 662 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 IQUBQ8NA54 791 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 DTWD2Q8NBA8 298 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 OR10T2Q8NGX3 314 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 FAM200AQ8TCP9 573 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 ZSWIM3Q96MP5 696 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 RTP3Q9BQQ7 232 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 TRIM9Q9C026 710 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 PDE11AQ9HCR9 933 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 ASAH2Q9NR71 780 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 GDE1Q9NZC3 331 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 PCDHA7Q9UN72 937 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 C2CD2Q9Y426 696 aa12.53□□□□□ -0.4
LINC00963-201ENST00000412141 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.53□□□□□ -0.4
LINC00963-201ENST00000412141 MORC2Q9Y6X9 1032 aaPredicted RBP12.53□□□□□ -0.4
LINC00963-201ENST00000412141 SCN1AP35498 2009 aa12.52□□□□□ -0.4
LINC00963-201ENST00000412141 VPS13AQ96RL7 3174 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 FRMD3A2A2Y4 597 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 MTMR11A4FU01 709 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 EXTL3O43909 919 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 ITGB3P05106 788 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 GARTP22102 1010 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 VIPR2P41587 438 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 EPHB3P54753 998 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 AMPD3Q01432 767 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 ALCAMQ13740 583 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 UBXN2BQ14CS0 331 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 TEAD2Q15562 447 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 SLC44A4Q53GD3 710 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 PRSS36Q5K4E3 855 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 CENPPQ6IPU0 288 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 BRSK2Q8IWQ3 736 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 NELFCDQ8IXH7 590 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 THEM5Q8N1Q8 247 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 CSGALNACT2Q8N6G5 542 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 RDH13Q8NBN7 331 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 KCNG4Q8TDN1 519 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 SEPT5Q99719 369 aaPredicted RBP12.52□□□□□ -0.41
LINC00963-201ENST00000412141 LRRC27Q9C0I9 530 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 TNMDQ9H2S6 317 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 SLC2A4RGQ9NR83 387 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 KBTBD4Q9NVX7 518 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 FAM13BQ9NYF5 915 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 SIT1Q9Y3P8 196 aa12.52□□□□□ -0.41
LINC00963-201ENST00000412141 A0A1W2PRU2 124 aa12.51□□□□□ -0.41
LINC00963-201ENST00000412141 KPNA7A9QM74 516 aa12.51□□□□□ -0.41
LINC00963-201ENST00000412141 CLIC2O15247 247 aa12.51□□□□□ -0.41
LINC00963-201ENST00000412141 MOSPD3O75425 235 aa12.51□□□□□ -0.41
LINC00963-201ENST00000412141 LDHAP00338 332 aaKnown RBP12.51□□□□□ -0.41
LINC00963-201ENST00000412141 HOXD13P35453 343 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms